RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	FOL1	P53848	824 aa		11.24	□□□□□ -0.61
TIF6	YPR016C	VPS30	Q02948	557 aa		11.24	□□□□□ -0.61
TIF6	YPR016C	MAL31	P38156	614 aa		11.23	□□□□□ -0.61
TIF6	YPR016C	UBP10	P53874	792 aa	Predicted RBP	11.23	□□□□□ -0.61
TIF6	YPR016C	PEX29	Q03370	554 aa		11.23	□□□□□ -0.61
TIF6	YPR016C	YLR407W	Q06070	228 aa		11.23	□□□□□ -0.61
TIF6	YPR016C	ELG1	Q12050	791 aa		11.23	□□□□□ -0.61
TIF6	YPR016C	LSP1	Q12230	341 aa	Known RBP	11.23	□□□□□ -0.61
TIF6	YPR016C	CPA2	P03965	1118 aa	Known RBP	11.22	□□□□□ -0.61
TIF6	YPR016C	KRS1	P15180	591 aa	Known RBP	11.22	□□□□□ -0.61
TIF6	YPR016C	TTI1	P36097	1038 aa		11.22	□□□□□ -0.61
TIF6	YPR016C	RPN10	P38886	268 aa	Known RBP	11.22	□□□□□ -0.61
TIF6	YPR016C	ISW2	Q08773	1120 aa		11.22	□□□□□ -0.61
TIF6	YPR016C	NUC1	P08466	329 aa		11.21	□□□□□ -0.61
TIF6	YPR016C	RNR3	P21672	869 aa	Known RBP	11.21	□□□□□ -0.61
TIF6	YPR016C	SWI4	P25302	1093 aa	Known RBP	11.21	□□□□□ -0.61
TIF6	YPR016C	PRX1	P34227	261 aa	Known RBP	11.21	□□□□□ -0.61
TIF6	YPR016C	BMH2	P34730	273 aa	Known RBP	11.21	□□□□□ -0.61
TIF6	YPR016C	TIF4631	P39935	952 aa	Known RBP	11.21	□□□□□ -0.61
TIF6	YPR016C	HRQ1	Q05549	1077 aa		11.21	□□□□□ -0.61
TIF6	YPR016C	GIN4	Q12263	1142 aa		11.21	□□□□□ -0.61
TIF6	YPR016C	TUS1	Q06412	1307 aa		11.2	□□□□□ -0.62
TIF6	YPR016C	DIT2	P21595	489 aa		11.2	□□□□□ -0.62
TIF6	YPR016C	SPB4	P25808	606 aa	Predicted RBP	11.2	□□□□□ -0.62
TIF6	YPR016C	RFC5	P38251	354 aa		11.2	□□□□□ -0.62
TIF6	YPR016C	UBP9	P39967	754 aa		11.2	□□□□□ -0.62
TIF6	YPR016C	YPL150W	Q12152	901 aa		11.2	□□□□□ -0.62
TIF6	YPR016C	CLF1	Q12309	687 aa	Predicted RBP	11.2	□□□□□ -0.62
TIF6	YPR016C	HSP82	P02829	709 aa	Known RBP	11.19	□□□□□ -0.62
TIF6	YPR016C	MET6	P05694	767 aa	Known RBP	11.19	□□□□□ -0.62
TIF6	YPR016C	ERG12	P07277	443 aa		11.19	□□□□□ -0.62
TIF6	YPR016C	SRP54	P20424	541 aa	Known RBP	11.19	□□□□□ -0.62
TIF6	YPR016C	VPS45	P38932	577 aa		11.19	□□□□□ -0.62
TIF6	YPR016C	PES4	P39684	611 aa		11.19	□□□□□ -0.62
TIF6	YPR016C	PEX14	P53112	341 aa		11.19	□□□□□ -0.62
TIF6	YPR016C	RRT6	P53117	311 aa	Predicted RBP	11.19	□□□□□ -0.62
TIF6	YPR016C	YDR341C	Q05506	607 aa	Known RBP	11.19	□□□□□ -0.62
TIF6	YPR016C	CIT1	P00890	479 aa		11.18	□□□□□ -0.62
TIF6	YPR016C	RXT2	P38255	430 aa		11.18	□□□□□ -0.62
TIF6	YPR016C	PCI8	P40512	444 aa		11.18	□□□□□ -0.62
TIF6	YPR016C	EAF7	P53911	425 aa	Known RBP	11.18	□□□□□ -0.62
TIF6	YPR016C	MDM1	Q01846	1127 aa		11.18	□□□□□ -0.62
TIF6	YPR016C	DSE3	Q08729	430 aa		11.18	□□□□□ -0.62
TIF6	YPR016C	BDH2	P39713	417 aa		11.17	□□□□□ -0.62
TIF6	YPR016C	GDE1	Q02979	1223 aa		11.17	□□□□□ -0.62
TIF6	YPR016C	SUE1	Q06524	206 aa		11.17	□□□□□ -0.62
TIF6	YPR016C	FBP1	P09201	348 aa		11.16	□□□□□ -0.62
TIF6	YPR016C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
TIF6	YPR016C	CBP3	P21560	335 aa		11.16	□□□□□ -0.62
TIF6	YPR016C	VPS1	P21576	704 aa	Known RBP	11.16	□□□□□ -0.62
TIF6	YPR016C	CDC6	P09119	513 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	RDS1	P25611	832 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	OCT1	P35999	772 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	MAL33	P38157	468 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	TOM71	P38825	639 aa	Known RBP	11.15	□□□□□ -0.62
TIF6	YPR016C	PIL1	P53252	339 aa	Known RBP	11.15	□□□□□ -0.62
TIF6	YPR016C	HST1	P53685	503 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	YML037C	Q03703	340 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	GIS4	Q04233	774 aa		11.15	□□□□□ -0.62
TIF6	YPR016C	SUB2	Q07478	446 aa	Known RBP	11.15	□□□□□ -0.62
TIF6	YPR016C	TYW1	Q08960	810 aa	Known RBP	11.15	□□□□□ -0.62
TIF6	YPR016C	MYO1	P08964	1928 aa		11.14	□□□□□ -0.63
TIF6	YPR016C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.14	□□□□□ -0.63	not detected
TIF6	YPR016C	LYS14	P40971	790 aa		11.14	□□□□□ -0.63
TIF6	YPR016C	SOL4	P53315	255 aa		11.14	□□□□□ -0.63
TIF6	YPR016C	PEX19	Q07418	342 aa		11.14	□□□□□ -0.63
TIF6	YPR016C	YDJ1	P25491	409 aa	Known RBP	11.13	□□□□□ -0.63
TIF6	YPR016C	YJL007C	P47080	104 aa		11.13	□□□□□ -0.63
TIF6	YPR016C	ASE1	P50275	885 aa		11.13	□□□□□ -0.63
TIF6	YPR016C	UTP4	Q06679	776 aa	Known RBP	11.13	□□□□□ -0.63
TIF6	YPR016C	MBR1	P23493	339 aa		11.12	□□□□□ -0.63
TIF6	YPR016C	MSP1	P28737	362 aa		11.12	□□□□□ -0.63
TIF6	YPR016C	LSB1	P53281	241 aa		11.12	□□□□□ -0.63
TIF6	YPR016C	SMD2	Q06217	110 aa	Known RBP	11.12	□□□□□ -0.63
TIF6	YPR016C	DCS2	Q12123	353 aa		11.12	□□□□□ -0.63
TIF6	YPR016C	GET3	Q12154	354 aa	Known RBP	11.12	□□□□□ -0.63
TIF6	YPR016C	PGI1	P12709	554 aa	Known RBP	11.11	□□□□□ -0.63
TIF6	YPR016C	MAK11	P20484	414 aa	Known RBP	11.11	□□□□□ -0.63
TIF6	YPR016C	NDT80	P38830	627 aa		11.11	□□□□□ -0.63
TIF6	YPR016C	TPM2	P40414	161 aa		11.11	□□□□□ -0.63
TIF6	YPR016C	YGL138C	P53122	345 aa		11.11	□□□□□ -0.63
TIF6	YPR016C	NAF1	P53919	492 aa	Known RBP	11.11	□□□□□ -0.63
TIF6	YPR016C	VIP1	Q06685	1146 aa	Known RBP	11.11	□□□□□ -0.63
TIF6	YPR016C	HVG1	P0CE11	249 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	RAD18	P10862	487 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	RPL8A	P17076	256 aa	Known RBP	11.1	□□□□□ -0.63
TIF6	YPR016C	SEC20	P28791	383 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	BSD2	P38356	321 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	CCT3	P39077	534 aa	Known RBP	11.1	□□□□□ -0.63
TIF6	YPR016C	VAB2	P40003	282 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	HYR1	P40581	163 aa	Known RBP	11.1	□□□□□ -0.63
TIF6	YPR016C	HAP5	Q02516	242 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	COG8	Q04632	607 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	CSC1	Q06538	782 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	CEX1	Q12453	761 aa		11.1	□□□□□ -0.63
TIF6	YPR016C	PER1	P25625	357 aa		11.09	□□□□□ -0.63
TIF6	YPR016C	MCD4	P36051	919 aa		11.09	□□□□□ -0.63
TIF6	YPR016C	PHO88	P38264	188 aa	Predicted RBP	11.09	□□□□□ -0.63
TIF6	YPR016C	CIR1	P42940	261 aa		11.09	□□□□□ -0.63
TIF6	YPR016C	JIP4	Q03361	876 aa		11.09	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms