RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	PEP12	P32854	288 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	UBP13	P38187	747 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	ETP1	P38748	585 aa	Known RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	YHR218W	P38899	603 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	NOP15	P53927	220 aa	Predicted RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	SNZ1	Q03148	297 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	REB1	P21538	810 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	STE11	P23561	717 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	PWP2	P25635	923 aa	Known RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	CPS1	P27614	576 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	GRX4	P32642	244 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	CSE1	P33307	960 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	IOC3	P43596	787 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	NUP157	P40064	1391 aa	Known RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	PAP1	P29468	568 aa	Known RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	SWC3	P31376	625 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	SRL3	P36167	246 aa		4.95	□□□□□ -1.62
GDE1	YPL110C	SET2	P46995	733 aa	Known RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	ABP140	Q08641	628 aa	Known RBP	4.95	□□□□□ -1.62
GDE1	YPL110C	MAK16	P10962	306 aa	Predicted RBP	4.94	□□□□□ -1.62
GDE1	YPL110C	MRPS28	P21771	286 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	NPL4	P33755	580 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
GDE1	YPL110C	PEX21	P50091	288 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	DSL1	P53847	754 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	MSH6	Q03834	1242 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	COG4	Q06096	861 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	ARV1	Q06541	321 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	YOR352W	Q08816	343 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	RIO1	Q12196	484 aa	Known RBP	4.94	□□□□□ -1.62
GDE1	YPL110C	CIT2	P08679	460 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	SMY1	P32364	656 aa	Known RBP	4.94	□□□□□ -1.62
GDE1	YPL110C	BIO2	P32451	375 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	MEF2	P39677	819 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	YER034W	P40022	185 aa	Known RBP	4.94	□□□□□ -1.62
GDE1	YPL110C	TMN3	P40071	706 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	CEP3	P40969	608 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	PXA1	P41909	870 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	TEA1	P47988	759 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	ESF2	P53743	316 aa	Known RBP	4.94	□□□□□ -1.62
GDE1	YPL110C	SPO71	Q03868	1245 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	FUS2	Q05670	677 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	YOL057W	Q08225	711 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	TIF1	P10081	395 aa	Known RBP	4.94	□□□□□ -1.62
GDE1	YPL110C	YML083C	Q04526	418 aa		4.94	□□□□□ -1.62
GDE1	YPL110C	SAS3	P34218	831 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	STU2	P46675	888 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	RKM1	Q08961	583 aa	Predicted RBP	4.93	□□□□□ -1.62
GDE1	YPL110C	STB3	Q12427	513 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	YOL098C	Q12496	1037 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	SEC8	P32855	1065 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	ESL2	P36168	1195 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	UTP18	P40362	594 aa	Predicted RBP	4.93	□□□□□ -1.62
GDE1	YPL110C	SSF2	Q12153	453 aa	Predicted RBP	4.93	□□□□□ -1.62
GDE1	YPL110C	HAT1	Q12341	374 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	AUS1	Q08409	1394 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	HCS1	P34243	683 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	ATG19	P35193	415 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	RCR1	P38212	213 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	OTU2	P38747	307 aa	Known RBP	4.93	□□□□□ -1.62
GDE1	YPL110C	SSZ1	P38788	538 aa	Known RBP	4.93	□□□□□ -1.62
GDE1	YPL110C	MET12	P46151	657 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	FAP1	P53971	965 aa		4.93	□□□□□ -1.62
GDE1	YPL110C	SEN2	P16658	377 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	ABZ1	P37254	787 aa	Predicted RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	TIM11	P81449	96 aa	Predicted RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	ESC2	Q06340	456 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	MHP1	P43638	1398 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	RPS3	P05750	240 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	NAT1	P12945	854 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	TSR4	P25040	408 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	PUP1	P25043	261 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	SLA1	P32790	1244 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	TIF5	P38431	405 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	CIC1	P38779	376 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	ARB1	P40024	610 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	FAF1	P40546	346 aa	Predicted RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	SSB1	P11484	613 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	VMA1	P17255	1071 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	SSB2	P40150	613 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	ALG12	P53730	551 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	LCD1	Q04377	747 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	SVF1	Q05515	481 aa		4.92	□□□□□ -1.62
GDE1	YPL110C	RRP5	Q05022	1729 aa	Known RBP	4.92	□□□□□ -1.62
GDE1	YPL110C	OSH3	P38713	996 aa	Known RBP	4.91	□□□□□ -1.62
GDE1	YPL110C	VPS41	P38959	992 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	MXR1	P40029	184 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	BUD6	P41697	788 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	KAR1	P11927	433 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	RTG2	P32608	588 aa	Known RBP	4.91	□□□□□ -1.62
GDE1	YPL110C	MRE11	P32829	692 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	APD1	P38281	316 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	STM1	P39015	273 aa	Known RBP	4.91	□□□□□ -1.62
GDE1	YPL110C	YJL007C	P47080	104 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	ASI1	P54074	624 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	HAP5	Q02516	242 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	VMS1	Q04311	632 aa	Known RBP	4.91	□□□□□ -1.62
GDE1	YPL110C	SMD2	Q06217	110 aa	Known RBP	4.91	□□□□□ -1.62
GDE1	YPL110C	CSR1	Q06705	408 aa	Known RBP	4.91	□□□□□ -1.62
GDE1	YPL110C	HNM1	P19807	563 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms