RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C RPT3P33298 428 aaKnown RBP10.81□□□□□ -0.68
SSN3YPL042C MET1P36150 593 aa10.81□□□□□ -0.68
SSN3YPL042C AIM9P40053 627 aaKnown RBP10.81□□□□□ -0.68
SSN3YPL042C YFH7P43591 353 aa10.81□□□□□ -0.68
SSN3YPL042C TAH18Q12181 623 aa10.81□□□□□ -0.68
SSN3YPL042C NOP58Q12499 511 aaKnown RBP10.81□□□□□ -0.68
SSN3YPL042C ICL1P28240 557 aaPredicted RBP10.8□□□□□ -0.68
SSN3YPL042C MRF1P30775 413 aaPredicted RBP10.8□□□□□ -0.68
SSN3YPL042C YKU70P32807 602 aa10.8□□□□□ -0.68
SSN3YPL042C SAP190P36123 1033 aa10.8□□□□□ -0.68
SSN3YPL042C SPO22P40511 975 aa10.8□□□□□ -0.68
SSN3YPL042C IRC8P47046 822 aa10.8□□□□□ -0.68
SSN3YPL042C TOS4Q06266 489 aa10.8□□□□□ -0.68
SSN3YPL042C RSC2Q06488 889 aa10.8□□□□□ -0.68
SSN3YPL042C SWI3P32591 825 aa10.79□□□□□ -0.68
SSN3YPL042C PTK1P36002 662 aaPredicted RBP10.79□□□□□ -0.68
SSN3YPL042C VHR2P40041 505 aa10.79□□□□□ -0.68
SSN3YPL042C IOC3P43596 787 aa10.79□□□□□ -0.68
SSN3YPL042C JJJ2P46997 583 aa10.79□□□□□ -0.68
SSN3YPL042C YNL058CP53947 316 aa10.79□□□□□ -0.68
SSN3YPL042C OYE2Q03558 400 aaKnown RBP10.79□□□□□ -0.68
SSN3YPL042C WRS1Q12109 432 aaKnown RBP10.79□□□□□ -0.68
SSN3YPL042C GPI8P49018 411 aa10.79□□□□□ -0.68
SSN3YPL042C PRP3Q03338 469 aaPredicted RBP10.79□□□□□ -0.68
SSN3YPL042C RPN12P32496 274 aa10.78□□□□□ -0.68
SSN3YPL042C BOI1P38041 980 aaKnown RBP10.78□□□□□ -0.68
SSN3YPL042C VTC3Q02725 835 aa10.78□□□□□ -0.68
SSN3YPL042C PPG1P32838 368 aa10.77□□□□□ -0.69
SSN3YPL042C SKI2P35207 1287 aaKnown RBP RIP-Chip data10.77□□□□□ -0.69not detected
SSN3YPL042C HXT5P38695 592 aa10.77□□□□□ -0.69
SSN3YPL042C CIC1P38779 376 aaKnown RBP10.77□□□□□ -0.69
SSN3YPL042C SRP1Q02821 542 aaKnown RBP10.77□□□□□ -0.69
SSN3YPL042C PRP42Q03776 544 aaKnown RBP10.77□□□□□ -0.69
SSN3YPL042C GAS5Q08193 484 aa10.77□□□□□ -0.69
SSN3YPL042C LSP1Q12230 341 aaKnown RBP10.77□□□□□ -0.69
SSN3YPL042C SNF3P10870 884 aa10.76□□□□□ -0.69
SSN3YPL042C TFG1P41895 735 aaPredicted RBP10.76□□□□□ -0.69
SSN3YPL042C GSM1P42950 618 aa10.76□□□□□ -0.69
SSN3YPL042C SVL3Q03088 825 aaKnown RBP10.76□□□□□ -0.69
SSN3YPL042C DPL1Q05567 589 aa10.76□□□□□ -0.69
SSN3YPL042C PPM2Q08282 695 aa10.76□□□□□ -0.69
SSN3YPL042C ARG82P07250 355 aa10.76□□□□□ -0.69
SSN3YPL042C BRF1P29056 596 aa10.76□□□□□ -0.69
SSN3YPL042C MDL2P33311 773 aa10.76□□□□□ -0.69
SSN3YPL042C VID30P53076 958 aa10.76□□□□□ -0.69
SSN3YPL042C PHM6Q05637 104 aa10.76□□□□□ -0.69
SSN3YPL042C RPS9BP05755 195 aaKnown RBP10.75□□□□□ -0.69
SSN3YPL042C RPL5P26321 297 aaKnown RBP10.75□□□□□ -0.69
SSN3YPL042C SHC1P39000 512 aa10.75□□□□□ -0.69
SSN3YPL042C BNI4P53858 892 aa10.75□□□□□ -0.69
SSN3YPL042C PGA3Q12746 312 aaKnown RBP10.75□□□□□ -0.69
SSN3YPL042C MPH3P0CE00 602 aa10.74□□□□□ -0.69
SSN3YPL042C VMA1P17255 1071 aaKnown RBP10.74□□□□□ -0.69
SSN3YPL042C PEP3P27801 918 aa10.74□□□□□ -0.69
SSN3YPL042C VPS24P36095 224 aaKnown RBP10.74□□□□□ -0.69
SSN3YPL042C VPS20Q04272 221 aa10.74□□□□□ -0.69
SSN3YPL042C FLO1P32768 1537 aa10.74□□□□□ -0.69
SSN3YPL042C COQ1P18900 473 aa10.73□□□□□ -0.69
SSN3YPL042C SSD1P24276 1250 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
SSN3YPL042C NPA3P47122 385 aa10.73□□□□□ -0.69
SSN3YPL042C APC5Q08683 685 aa10.73□□□□□ -0.69
SSN3YPL042C RRG1Q12167 365 aaPredicted RBP10.73□□□□□ -0.69
SSN3YPL042C IMP2'P32351 346 aa10.73□□□□□ -0.69
SSN3YPL042C TFC3P34111 1160 aa10.73□□□□□ -0.69
SSN3YPL042C GUA1P38625 525 aaKnown RBP10.73□□□□□ -0.69
SSN3YPL042C CRG1P38892 291 aaRIP-Chip data10.73□□□□□ -0.69not detected
SSN3YPL042C RRP8P38961 392 aaKnown RBP10.73□□□□□ -0.69
SSN3YPL042C RSC8P43609 557 aaKnown RBP10.73□□□□□ -0.69
SSN3YPL042C CMP2P14747 604 aa10.72□□□□□ -0.69
SSN3YPL042C RTG2P32608 588 aaKnown RBP10.72□□□□□ -0.69
SSN3YPL042C APL6P46682 809 aa10.72□□□□□ -0.69
SSN3YPL042C PIP2P52960 996 aa10.72□□□□□ -0.69
SSN3YPL042C SPN1Q06505 410 aaPredicted RBP10.72□□□□□ -0.69
SSN3YPL042C ACK1Q07622 623 aaPredicted RBP10.72□□□□□ -0.69
SSN3YPL042C FLO11P08640 1367 aa10.71□□□□□ -0.69
SSN3YPL042C FUI1P38196 639 aa10.71□□□□□ -0.69
SSN3YPL042C PUS6P53294 404 aa10.71□□□□□ -0.69
SSN3YPL042C EAF7P53911 425 aaKnown RBP10.71□□□□□ -0.69
SSN3YPL042C RPS7AP26786 190 aaKnown RBP10.7□□□□□ -0.7
SSN3YPL042C YHR218WP38899 603 aa10.7□□□□□ -0.7
SSN3YPL042C SLN1P39928 1220 aaPredicted RBP10.7□□□□□ -0.7
SSN3YPL042C VID28P40547 921 aa10.7□□□□□ -0.7
SSN3YPL042C ESF1Q06344 628 aaKnown RBP10.7□□□□□ -0.7
SSN3YPL042C TSR3Q12094 313 aaKnown RBP10.7□□□□□ -0.7
SSN3YPL042C CHO2P05374 869 aaKnown RBP10.69□□□□□ -0.7
SSN3YPL042C AFG2P32794 780 aa10.69□□□□□ -0.7
SSN3YPL042C RER2P35196 286 aa10.69□□□□□ -0.7
SSN3YPL042C RTS1P38903 757 aa10.69□□□□□ -0.7
SSN3YPL042C ECM23Q02710 187 aa10.69□□□□□ -0.7
SSN3YPL042C RPL19AP0CX82 189 aaKnown RBP10.69□□□□□ -0.7
SSN3YPL042C RPL19BP0CX83 189 aaPredicted RBP10.69□□□□□ -0.7
SSN3YPL042C TRX2P22803 104 aaKnown RBP10.69□□□□□ -0.7
SSN3YPL042C FBP26P32604 452 aa10.69□□□□□ -0.7
SSN3YPL042C YNR021WP53723 404 aaKnown RBP10.69□□□□□ -0.7
SSN3YPL042C ELA1P53861 379 aaPredicted RBP10.69□□□□□ -0.7
SSN3YPL042C NSG2P53898 299 aa10.69□□□□□ -0.7
SSN3YPL042C ARP5P53946 755 aa10.69□□□□□ -0.7
SSN3YPL042C UFD2P54860 961 aa10.69□□□□□ -0.7
SSN3YPL042C TIM11P81449 96 aaPredicted RBP10.69□□□□□ -0.7
SSN3YPL042C RPS15Q01855 142 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms