RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	CYB2	P00175	591 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	RPS6A	P0CX37	236 aa	Known RBP	4.42	□□□□□ -1.7
NCR1	YPL006W	RPS6B	P0CX38	236 aa	Predicted RBP	4.42	□□□□□ -1.7
NCR1	YPL006W	ASF1	P32447	279 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	RRP1	P35178	278 aa	Predicted RBP	4.42	□□□□□ -1.7
NCR1	YPL006W	GEF1	P37020	779 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	RXT2	P38255	430 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	ENP2	P48234	707 aa	Known RBP	4.42	□□□□□ -1.7
NCR1	YPL006W	UFD2	P54860	961 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	INM2	Q05533	292 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	YAH1	Q12184	172 aa	Known RBP	4.42	□□□□□ -1.7
NCR1	YPL006W	SPO11	P23179	398 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	SEC65	P29478	273 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	MGM1	P32266	881 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	VPS41	P38959	992 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	YGL140C	P53120	1219 aa		4.42	□□□□□ -1.7
NCR1	YPL006W	SEC23	P15303	768 aa	Known RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	MSH3	P25336	1018 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	DEP1	P31385	405 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	HIR1	P32479	840 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	SAC6	P32599	642 aa	Known RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	ANP1	P32629	500 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	RPT3	P33298	428 aa	Known RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	SPT21	P35209	758 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	SAP190	P36123	1033 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	REI1	P38344	393 aa	Predicted RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	YHL050C	P38721	697 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	BCD1	P38772	366 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	NUG1	P40010	520 aa	Known RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	AIP1	P46680	615 aa	Known RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	CTK3	P46963	296 aa	Predicted RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	HMI1	Q12039	706 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	ATG9	Q12142	997 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	SPL2	P38839	148 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	CAJ1	P39101	391 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	BUD16	P39988	312 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	EFM4	P40516	257 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	MGA2	P40578	1113 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	DAK2	P43550	591 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	LSC2	P53312	427 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	ERG5	P54781	538 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	RBA50	Q04418	439 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	CSC1	Q06538	782 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	YOR111W	Q99210	232 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	YOL087C	Q99247	1116 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	YEL043W	P32618	956 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	EFM2	P38347	419 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	ICP55	P40051	511 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	CSM2	P40465	213 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	EBS1	Q03466	884 aa	Known RBP	4.41	□□□□□ -1.7
NCR1	YPL006W	GIN4	Q12263	1142 aa		4.41	□□□□□ -1.7
NCR1	YPL006W	ALG1	P16661	449 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	MAK31	P23059	88 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	MAL31	P38156	614 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	CTM1	P38818	585 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	NDC80	P40460	691 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	HFM1	P51979	1187 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	GDE1	Q02979	1223 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	YMR102C	Q03177	834 aa		4.4	□□□□□ -1.7
NCR1	YPL006W	EIS1	Q05050	843 aa	Known RBP	4.4	□□□□□ -1.7
NCR1	YPL006W	RPO26	P20435	155 aa		4.4	□□□□□ -1.71
NCR1	YPL006W	RNR3	P21672	869 aa	Known RBP	4.4	□□□□□ -1.71
NCR1	YPL006W	CLB1	P24868	471 aa		4.4	□□□□□ -1.71
NCR1	YPL006W	MUD2	P36084	527 aa	Known RBP	4.4	□□□□□ -1.71
NCR1	YPL006W	CCT4	P39078	528 aa	Known RBP	4.4	□□□□□ -1.71
NCR1	YPL006W	MYO5	Q04439	1219 aa	Known RBP	4.4	□□□□□ -1.71
NCR1	YPL006W	MED8	P38304	223 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	MCX1	P38323	520 aa	Predicted RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	MIP6	P38760	659 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	RRP8	P38961	392 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	ATG3	P40344	310 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	YGL138C	P53122	345 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	YOL098C	Q12496	1037 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	HIS4	P00815	799 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	MET6	P05694	767 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	LCB1	P25045	558 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	SHQ1	P40486	507 aa	Predicted RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	VAC14	Q06708	880 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	DPH6	Q12429	685 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	RMP1	Q12530	201 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	CDC37	P06101	506 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	SSA2	P10592	639 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	SPO12	P17123	173 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	RGD1	P38339	666 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	ERG7	P38604	731 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	RTS1	P38903	757 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	ECM1	P39715	212 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	HUL4	P40985	892 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	NGL3	Q03210	505 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	ATG23	Q06671	453 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	NEW1	Q08972	1196 aa	Known RBP	4.39	□□□□□ -1.71
NCR1	YPL006W	CEX1	Q12453	761 aa		4.39	□□□□□ -1.71
NCR1	YPL006W	PRO3	P32263	286 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	PRP40	P33203	583 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	BOI1	P38041	980 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	SMF1	P38925	575 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	VFA1	P40080	203 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	NAF1	P53919	492 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	RAT1	Q02792	1006 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	YOL075C	Q08234	1294 aa		4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 122.5 ms