RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C RPS4AP0CX35 261 aaKnown RBP4.4□□□□□ -1.7
SWT1YOR166C RPS4BP0CX36 261 aaKnown RBP4.4□□□□□ -1.7
SWT1YOR166C YKL222CP35995 705 aa4.4□□□□□ -1.7
SWT1YOR166C PEX7P39108 375 aa4.4□□□□□ -1.7
SWT1YOR166C MSH6Q03834 1242 aa4.4□□□□□ -1.7
SWT1YOR166C LPX1Q12405 387 aaKnown RBP4.4□□□□□ -1.7
SWT1YOR166C MSH4P40965 878 aaPredicted RBP4.4□□□□□ -1.71
SWT1YOR166C SAP155P43612 1002 aa4.39□□□□□ -1.71
SWT1YOR166C YVC1Q12324 675 aa4.39□□□□□ -1.71
SWT1YOR166C PRP6P19735 899 aaPredicted RBP4.38□□□□□ -1.71
SWT1YOR166C ADP1P25371 1049 aa4.38□□□□□ -1.71
SWT1YOR166C GIP4P39732 760 aa4.38□□□□□ -1.71
SWT1YOR166C SSY1Q03770 852 aa4.38□□□□□ -1.71
SWT1YOR166C UTP22P53254 1237 aaPredicted RBP4.37□□□□□ -1.71
SWT1YOR166C TRE1Q08919 783 aa4.37□□□□□ -1.71
SWT1YOR166C ALG6Q12001 544 aaKnown RBP4.37□□□□□ -1.71
SWT1YOR166C MNL2Q12205 849 aa4.37□□□□□ -1.71
SWT1YOR166C FLR1P38124 548 aa4.36□□□□□ -1.71
SWT1YOR166C REI1P38344 393 aaPredicted RBP4.36□□□□□ -1.71
SWT1YOR166C UFD2P54860 961 aa4.36□□□□□ -1.71
SWT1YOR166C TY1A-LR4P0C2I8 440 aaKnown RBP4.35□□□□□ -1.71
SWT1YOR166C TY1A-DR6P0CX70 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-ER1P0CX71 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-LR2P0CX72 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-PLP0CX73 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-JR1P0CX74 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-LR3P0CX75 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-ML2P0CX76 440 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-GR1Q12085 440 aa4.35□□□□□ -1.71
SWT1YOR166C YDL177CQ12257 170 aa4.35□□□□□ -1.71
SWT1YOR166C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.35□□□□□ -1.71
SWT1YOR166C TY1A-OLQ92392 440 aaKnown RBP4.35□□□□□ -1.71
SWT1YOR166C SMY2P32909 740 aaKnown RBP4.34□□□□□ -1.71
SWT1YOR166C YGR045CP53229 120 aa4.34□□□□□ -1.71
SWT1YOR166C HDA2Q06629 674 aa4.34□□□□□ -1.71
SWT1YOR166C FLP1P03870 423 aa4.33□□□□□ -1.72
SWT1YOR166C NFS1P25374 497 aa4.33□□□□□ -1.72
SWT1YOR166C ARL1P38116 183 aaKnown RBP4.33□□□□□ -1.72
SWT1YOR166C QDR1P40475 563 aa4.33□□□□□ -1.72
SWT1YOR166C SUB2Q07478 446 aaKnown RBP4.33□□□□□ -1.72
SWT1YOR166C PRO1P32264 428 aa4.32□□□□□ -1.72
SWT1YOR166C GLO3P38682 493 aaKnown RBP4.32□□□□□ -1.72
SWT1YOR166C ATG1P53104 897 aa4.32□□□□□ -1.72
SWT1YOR166C NUT1P53114 1132 aa4.32□□□□□ -1.72
SWT1YOR166C YAF9P53930 226 aa4.32□□□□□ -1.72
SWT1YOR166C ELA1P53861 379 aaPredicted RBP4.31□□□□□ -1.72
SWT1YOR166C YNL011CP53980 444 aa4.31□□□□□ -1.72
SWT1YOR166C NNK1P36003 928 aa4.3□□□□□ -1.72
SWT1YOR166C ECM2P38241 364 aaKnown RBP4.3□□□□□ -1.72
SWT1YOR166C AIM3P38266 947 aaKnown RBP4.3□□□□□ -1.72
SWT1YOR166C PTC7P38797 343 aa4.3□□□□□ -1.72
SWT1YOR166C ACF4P47129 309 aa4.3□□□□□ -1.72
SWT1YOR166C TRS120Q04183 1289 aa4.3□□□□□ -1.72
SWT1YOR166C PMT7Q06644 662 aa4.3□□□□□ -1.72
SWT1YOR166C EXO5P38289 585 aa4.29□□□□□ -1.72
SWT1YOR166C RIM8P53179 542 aa4.29□□□□□ -1.72
SWT1YOR166C MRPL22P53881 309 aa4.29□□□□□ -1.72
SWT1YOR166C CDC55Q00362 526 aa4.29□□□□□ -1.72
SWT1YOR166C KAR5Q04746 504 aa4.29□□□□□ -1.72
SWT1YOR166C BSC2Q05611 235 aa4.29□□□□□ -1.72
SWT1YOR166C PUS7Q08647 676 aaKnown RBP4.29□□□□□ -1.72
SWT1YOR166C SAM35P14693 329 aa4.28□□□□□ -1.72
SWT1YOR166C TRL1P09880 827 aaKnown RBP4.27□□□□□ -1.73
SWT1YOR166C GTS1P40956 396 aa4.27□□□□□ -1.73
SWT1YOR166C SOD2P00447 233 aa4.27□□□□□ -1.73
SWT1YOR166C NEM1P38757 446 aa4.27□□□□□ -1.73
SWT1YOR166C SLS1P42900 643 aa4.27□□□□□ -1.73
SWT1YOR166C AVO1Q08236 1176 aa4.27□□□□□ -1.73
SWT1YOR166C RVS167P39743 482 aaKnown RBP4.26□□□□□ -1.73
SWT1YOR166C GIS1Q03833 894 aa4.26□□□□□ -1.73
SWT1YOR166C GPI13Q07830 1017 aa4.26□□□□□ -1.73
SWT1YOR166C YPL277CQ08989 487 aa4.26□□□□□ -1.73
SWT1YOR166C MCM5P29496 775 aaKnown RBP4.25□□□□□ -1.73
SWT1YOR166C ETP1P38748 585 aaKnown RBP4.25□□□□□ -1.73
SWT1YOR166C TPP1Q03796 238 aa4.25□□□□□ -1.73
SWT1YOR166C INP54Q08227 384 aaKnown RBP4.25□□□□□ -1.73
SWT1YOR166C NOG1Q02892 647 aaKnown RBP4.24□□□□□ -1.73
SWT1YOR166C RET1P22276 1149 aaKnown RBP4.23□□□□□ -1.73
SWT1YOR166C MON1P53129 644 aa4.23□□□□□ -1.73
SWT1YOR166C RPS13P05756 151 aaKnown RBP4.22□□□□□ -1.73
SWT1YOR166C TOD6P34219 525 aa4.22□□□□□ -1.73
SWT1YOR166C YKL077WP36081 392 aa4.22□□□□□ -1.73
SWT1YOR166C YAR028WP39548 234 aa4.22□□□□□ -1.73
SWT1YOR166C YLR257WQ06146 321 aaKnown RBP4.22□□□□□ -1.73
SWT1YOR166C YHL012WP38709 493 aa4.21□□□□□ -1.74
SWT1YOR166C NMD3P38861 518 aaKnown RBP4.21□□□□□ -1.74
SWT1YOR166C MDJ2P42834 146 aa4.21□□□□□ -1.74
SWT1YOR166C CLU1Q03690 1277 aaKnown RBP4.21□□□□□ -1.74
SWT1YOR166C UTP5Q04177 643 aaKnown RBP4.21□□□□□ -1.74
SWT1YOR166C FRT1Q99332 602 aa4.21□□□□□ -1.74
SWT1YOR166C MDL2P33311 773 aa4.2□□□□□ -1.74
SWT1YOR166C YDR132CQ03900 495 aa4.2□□□□□ -1.74
SWT1YOR166C RSA3Q05942 220 aaKnown RBP4.2□□□□□ -1.74
SWT1YOR166C PRE10P21242 288 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
SWT1YOR166C SHU2P38957 223 aa4.19□□□□□ -1.74
SWT1YOR166C SNO2P53823 222 aa4.19□□□□□ -1.74
SWT1YOR166C GSF2Q04697 403 aaKnown RBP4.19□□□□□ -1.74
SWT1YOR166C TAF7Q05021 590 aa4.19□□□□□ -1.74
SWT1YOR166C YCS4Q06156 1176 aa4.19□□□□□ -1.74
SWT1YOR166C SRO9P25567 434 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms