RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C PTK2P47116 818 aaKnown RBP8.31□□□□□ -1.08
RUP1YOR138C CUE3P53137 624 aaKnown RBP8.31□□□□□ -1.08
RUP1YOR138C ATG9Q12142 997 aa8.31□□□□□ -1.08
RUP1YOR138C NYV1Q12255 253 aa8.31□□□□□ -1.08
RUP1YOR138C VPS41P38959 992 aa8.3□□□□□ -1.08
RUP1YOR138C RPS15Q01855 142 aaKnown RBP8.3□□□□□ -1.08
RUP1YOR138C FAS2P19097 1887 aaKnown RBP8.3□□□□□ -1.08
RUP1YOR138C RPL22AP05749 121 aaKnown RBP8.3□□□□□ -1.08
RUP1YOR138C YET1P35723 206 aa8.3□□□□□ -1.08
RUP1YOR138C SAP1P39955 897 aaKnown RBP8.3□□□□□ -1.08
RUP1YOR138C FYV8P46949 817 aaKnown RBP8.3□□□□□ -1.08
RUP1YOR138C MRS2Q01926 470 aa8.3□□□□□ -1.08
RUP1YOR138C LAM6Q08001 693 aa8.3□□□□□ -1.08
RUP1YOR138C MGM1P32266 881 aa8.29□□□□□ -1.08
RUP1YOR138C SPT21P35209 758 aa8.29□□□□□ -1.08
RUP1YOR138C IOC3P43596 787 aa8.29□□□□□ -1.08
RUP1YOR138C FAR11P53917 953 aa8.29□□□□□ -1.08
RUP1YOR138C RNT1Q02555 471 aa8.29□□□□□ -1.08
RUP1YOR138C MRD1Q06106 887 aaKnown RBP8.29□□□□□ -1.08
RUP1YOR138C MMR1Q06324 491 aa8.29□□□□□ -1.08
RUP1YOR138C GRE2Q12068 342 aaKnown RBP8.29□□□□□ -1.08
RUP1YOR138C RPS6AP0CX37 236 aaKnown RBP8.29□□□□□ -1.08
RUP1YOR138C RPS6BP0CX38 236 aaPredicted RBP8.29□□□□□ -1.08
RUP1YOR138C BMH1P29311 267 aaKnown RBP8.29□□□□□ -1.08
RUP1YOR138C ALD2P47771 506 aa8.29□□□□□ -1.08
RUP1YOR138C YGL140CP53120 1219 aa8.29□□□□□ -1.08
RUP1YOR138C FAP1P53971 965 aa8.29□□□□□ -1.08
RUP1YOR138C RRP6Q12149 733 aaKnown RBP8.29□□□□□ -1.08
RUP1YOR138C PTC5Q12511 572 aa8.29□□□□□ -1.08
RUP1YOR138C STE11P23561 717 aa8.28□□□□□ -1.08
RUP1YOR138C DPB3P27344 201 aa8.28□□□□□ -1.08
RUP1YOR138C ANP1P32629 500 aa8.28□□□□□ -1.08
RUP1YOR138C RIM101P33400 625 aa8.28□□□□□ -1.08
RUP1YOR138C RXT2P38255 430 aa8.28□□□□□ -1.08
RUP1YOR138C CCT4P39078 528 aaKnown RBP8.28□□□□□ -1.08
RUP1YOR138C LSC2P53312 427 aa8.28□□□□□ -1.08
RUP1YOR138C ALF1P53904 254 aa8.28□□□□□ -1.08
RUP1YOR138C GYL1Q04322 720 aa8.28□□□□□ -1.08
RUP1YOR138C YOR111WQ99210 232 aa8.28□□□□□ -1.08
RUP1YOR138C PRP40P33203 583 aaKnown RBP8.27□□□□□ -1.09
RUP1YOR138C SHM1P37292 490 aaPredicted RBP8.27□□□□□ -1.09
RUP1YOR138C MAL31P38156 614 aa8.27□□□□□ -1.09
RUP1YOR138C PCI8P40512 444 aa8.27□□□□□ -1.09
RUP1YOR138C MVP1P40959 511 aaKnown RBP8.27□□□□□ -1.09
RUP1YOR138C YGR237CP50089 785 aa8.27□□□□□ -1.09
RUP1YOR138C GDE1Q02979 1223 aa8.27□□□□□ -1.09
RUP1YOR138C SML1Q04964 104 aa8.27□□□□□ -1.09
RUP1YOR138C HIS4P00815 799 aaKnown RBP8.27□□□□□ -1.09
RUP1YOR138C CTM1P38818 585 aa8.27□□□□□ -1.09
RUP1YOR138C ATG3P40344 310 aa8.27□□□□□ -1.09
RUP1YOR138C GIS4Q04233 774 aa8.27□□□□□ -1.09
RUP1YOR138C ATG23Q06671 453 aa8.27□□□□□ -1.09
RUP1YOR138C PSO2P30620 661 aa8.26□□□□□ -1.09
RUP1YOR138C SLD2P34252 453 aa8.26□□□□□ -1.09
RUP1YOR138C RRP1P35178 278 aaPredicted RBP8.26□□□□□ -1.09
RUP1YOR138C CSM2P40465 213 aa8.26□□□□□ -1.09
RUP1YOR138C EBS1Q03466 884 aaKnown RBP8.26□□□□□ -1.09
RUP1YOR138C YLR287CQ05881 355 aa8.26□□□□□ -1.09
RUP1YOR138C MTF2P10849 440 aa8.25□□□□□ -1.09
RUP1YOR138C RPO26P20435 155 aa8.25□□□□□ -1.09
RUP1YOR138C BOI1P38041 980 aaKnown RBP8.25□□□□□ -1.09
RUP1YOR138C DPH6Q12429 685 aa8.25□□□□□ -1.09
RUP1YOR138C CYB2P00175 591 aa8.25□□□□□ -1.09
RUP1YOR138C MET6P05694 767 aaKnown RBP8.25□□□□□ -1.09
RUP1YOR138C RIT1P23796 513 aa8.25□□□□□ -1.09
RUP1YOR138C MSH1P25846 959 aa8.25□□□□□ -1.09
RUP1YOR138C PXL1P36166 706 aa8.25□□□□□ -1.09
RUP1YOR138C EFM2P38347 419 aa8.25□□□□□ -1.09
RUP1YOR138C LYS14P40971 790 aa8.25□□□□□ -1.09
RUP1YOR138C SPP382Q06411 708 aaPredicted RBP8.25□□□□□ -1.09
RUP1YOR138C YOR296WQ08748 1289 aa8.25□□□□□ -1.09
RUP1YOR138C HMI1Q12039 706 aa8.25□□□□□ -1.09
RUP1YOR138C MCM3P24279 971 aaKnown RBP8.24□□□□□ -1.09
RUP1YOR138C YEL043WP32618 956 aa8.24□□□□□ -1.09
RUP1YOR138C MDL2P33311 773 aa8.24□□□□□ -1.09
RUP1YOR138C PTK1P36002 662 aaPredicted RBP8.24□□□□□ -1.09
RUP1YOR138C NUG1P40010 520 aaKnown RBP8.24□□□□□ -1.09
RUP1YOR138C YJL181WP46987 611 aa8.24□□□□□ -1.09
RUP1YOR138C MAL13P53338 473 aa8.24□□□□□ -1.09
RUP1YOR138C ERG5P54781 538 aa8.24□□□□□ -1.09
RUP1YOR138C YMR102CQ03177 834 aa8.24□□□□□ -1.09
RUP1YOR138C VAC14Q06708 880 aa8.24□□□□□ -1.09
RUP1YOR138C RNR3P21672 869 aaKnown RBP8.24□□□□□ -1.09
RUP1YOR138C MAK31P23059 88 aa8.24□□□□□ -1.09
RUP1YOR138C ASF1P32447 279 aa8.24□□□□□ -1.09
RUP1YOR138C RPC25P35718 212 aa8.24□□□□□ -1.09
RUP1YOR138C GEF1P37020 779 aa8.24□□□□□ -1.09
RUP1YOR138C NAF1P53919 492 aaKnown RBP8.24□□□□□ -1.09
RUP1YOR138C RAT1Q02792 1006 aaKnown RBP8.24□□□□□ -1.09
RUP1YOR138C OMS1Q06668 471 aa8.24□□□□□ -1.09
RUP1YOR138C OSH2Q12451 1283 aa8.24□□□□□ -1.09
RUP1YOR138C SEC23P15303 768 aaKnown RBP8.23□□□□□ -1.09
RUP1YOR138C SPO12P17123 173 aa8.23□□□□□ -1.09
RUP1YOR138C NPL4P33755 580 aa8.23□□□□□ -1.09
RUP1YOR138C MYO3P36006 1272 aa8.23□□□□□ -1.09
RUP1YOR138C MCX1P38323 520 aaPredicted RBP8.23□□□□□ -1.09
RUP1YOR138C RGD1P38339 666 aa8.23□□□□□ -1.09
RUP1YOR138C YHL050CP38721 697 aa8.23□□□□□ -1.09
RUP1YOR138C MIP6P38760 659 aaKnown RBP8.23□□□□□ -1.09
RUP1YOR138C SHQ1P40486 507 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms