RNA–Protein interactions for RNA: YNL308C

KRI1, Transcript of Essential nucleolar protein required for 40S ribosome biogenesis, yeast

Gene KRI1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRI1	YNL308C	ROG3	P43602	733 aa		4.26	□□□□□ -1.73
KRI1	YNL308C	MDG1	P53885	366 aa		4.26	□□□□□ -1.73
KRI1	YNL308C	NUP159	P40477	1460 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	PHO4	P07270	312 aa	Known RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	RAD51	P25454	400 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	MGE1	P38523	228 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	RSC8	P43609	557 aa	Known RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	TAN1	P53072	289 aa	Predicted RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	ITC1	P53125	1264 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	TY1A-MR1	Q04215	440 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	RVB2	Q12464	471 aa	Known RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	GEA1	P47102	1408 aa	Predicted RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	RRP14	P36080	434 aa	Known RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	NCL1	P38205	684 aa	Known RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	AIM46	P38885	310 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	YNR040W	P53736	256 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	YMR265C	Q03508	461 aa	Known RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	BSC2	Q05611	235 aa		4.25	□□□□□ -1.73
KRI1	YNL308C	YSH1	Q06224	779 aa	Predicted RBP	4.25	□□□□□ -1.73
KRI1	YNL308C	SNQ2	P32568	1501 aa	Known RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	TY1B-A	O13527	1196 aa	Known RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	RPP1A	P05318	106 aa	Predicted RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	SUP35	P05453	685 aa	Known RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	DIT1	P21623	536 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	CLB1	P24868	471 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	GCD6	P32501	712 aa	Known RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	CHZ1	P40019	153 aa	Predicted RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	TPM2	P40414	161 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	YIR007W	P40566	764 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	DAK2	P43550	591 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	SAM37	P50110	327 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	CUZ1	P53899	274 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	TLG1	Q03322	224 aa		4.24	□□□□□ -1.73
KRI1	YNL308C	EMG1	Q06287	252 aa	Known RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	NUP157	P40064	1391 aa	Known RBP	4.24	□□□□□ -1.73
KRI1	YNL308C	GAR1	P28007	205 aa	Known RBP	4.23	□□□□□ -1.73
KRI1	YNL308C	MCM2	P29469	868 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	RPT1	P33299	467 aa	Known RBP	4.23	□□□□□ -1.73
KRI1	YNL308C	ACO2	P39533	789 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	YIL165C	P40446	119 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	CAF120	P53836	1060 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	KRE33	P53914	1056 aa	Known RBP	4.23	□□□□□ -1.73
KRI1	YNL308C	VPS72	Q03388	795 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	NOC3	Q07896	663 aa	Predicted RBP	4.23	□□□□□ -1.73
KRI1	YNL308C	YOL087C	Q99247	1116 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	TY3B-G	Q99315	1547 aa		4.23	□□□□□ -1.73
KRI1	YNL308C	CCP1	P00431	361 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	DEP1	P31385	405 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	SEC8	P32855	1065 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	VPS35	P34110	944 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	CIC1	P38779	376 aa	Known RBP	4.22	□□□□□ -1.73
KRI1	YNL308C	VPS27	P40343	622 aa	Known RBP	4.22	□□□□□ -1.73
KRI1	YNL308C	YMR102C	Q03177	834 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	VPS60	Q03390	229 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	FPS1	P23900	669 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	YHL008C	P38750	627 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	YJR107W	P47145	328 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	HOS3	Q02959	697 aa	Known RBP	4.22	□□□□□ -1.73
KRI1	YNL308C	OYE2	Q03558	400 aa	Known RBP	4.22	□□□□□ -1.73
KRI1	YNL308C	COG8	Q04632	607 aa		4.22	□□□□□ -1.73
KRI1	YNL308C	INP54	Q08227	384 aa	Known RBP	4.22	□□□□□ -1.73
KRI1	YNL308C	PDR15	Q04182	1529 aa	Known RBP	4.22	□□□□□ -1.73
KRI1	YNL308C	DNF1	P32660	1571 aa		4.21	□□□□□ -1.74
KRI1	YNL308C	YGL140C	P53120	1219 aa		4.21	□□□□□ -1.74
KRI1	YNL308C	ADE12	P80210	433 aa	Known RBP	4.21	□□□□□ -1.74
KRI1	YNL308C	HEH2	Q03281	663 aa		4.21	□□□□□ -1.74
KRI1	YNL308C	PDS5	Q04264	1277 aa		4.21	□□□□□ -1.74
KRI1	YNL308C	ERV41	Q04651	352 aa		4.21	□□□□□ -1.74
KRI1	YNL308C	NHA1	Q99271	985 aa		4.21	□□□□□ -1.74
KRI1	YNL308C	PUP2	P32379	260 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	SWI3	P32591	825 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	ECM2	P38241	364 aa	Known RBP	4.2	□□□□□ -1.74
KRI1	YNL308C	MSC7	P38694	644 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	CEM1	P39525	442 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	RTS3	P53289	263 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	ALD3	P54114	506 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	SML1	Q04964	104 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	APL5	Q08951	932 aa	Known RBP	4.2	□□□□□ -1.74
KRI1	YNL308C	OXR1	Q08952	273 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	LSP1	Q12230	341 aa	Known RBP	4.2	□□□□□ -1.74
KRI1	YNL308C	YOL098C	Q12496	1037 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	YDR461C-A	Q2V2P7	80 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	ULS1	Q08562	1619 aa		4.2	□□□□□ -1.74
KRI1	YNL308C	FLP1	P03870	423 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	IDI1	P15496	288 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	RPC82	P32349	654 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	SWH1	P35845	1188 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	MET1	P36150	593 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	YER156C	P40093	338 aa	Known RBP	4.19	□□□□□ -1.74
KRI1	YNL308C	LEM3	P42838	414 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	LCD1	Q04377	747 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	ORM2	Q06144	216 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	SLP1	Q12232	587 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	DNF2	Q12675	1612 aa		4.19	□□□□□ -1.74
KRI1	YNL308C	GEA2	P39993	1459 aa	Known RBP	4.19	□□□□□ -1.74
KRI1	YNL308C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
KRI1	YNL308C	PYC2	P32327	1180 aa	Known RBP	4.19	□□□□□ -1.74
KRI1	YNL308C	RPS0A	P32905	252 aa	Known RBP	4.19	□□□□□ -1.74
KRI1	YNL308C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
KRI1	YNL308C	TCD1	P38756	429 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms