RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C NUT1P53114 1132 aa5.6□□□□□ -1.51
SSO2YMR183C FAR11P53917 953 aa5.6□□□□□ -1.51
SSO2YMR183C ORC1P54784 914 aaPredicted RBP5.6□□□□□ -1.51
SSO2YMR183C PMT7Q06644 662 aa5.6□□□□□ -1.51
SSO2YMR183C HTS1P07263 546 aaKnown RBP5.59□□□□□ -1.51
SSO2YMR183C CIC1P38779 376 aaKnown RBP5.59□□□□□ -1.51
SSO2YMR183C AKR1P39010 764 aa5.59□□□□□ -1.51
SSO2YMR183C NCE103P53615 221 aa5.59□□□□□ -1.51
SSO2YMR183C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
SSO2YMR183C MSC6Q08818 692 aaKnown RBP5.59□□□□□ -1.51
SSO2YMR183C SPO74P45819 413 aa5.58□□□□□ -1.52
SSO2YMR183C KIP3P53086 805 aaKnown RBP5.58□□□□□ -1.52
SSO2YMR183C NOP8Q08287 484 aaPredicted RBP5.58□□□□□ -1.52
SSO2YMR183C YIG1Q08956 461 aa5.58□□□□□ -1.52
SSO2YMR183C RVS167P39743 482 aaKnown RBP5.57□□□□□ -1.52
SSO2YMR183C YAF9P53930 226 aa5.57□□□□□ -1.52
SSO2YMR183C IOC4Q04213 475 aa5.57□□□□□ -1.52
SSO2YMR183C YLL054CQ12244 843 aa5.57□□□□□ -1.52
SSO2YMR183C SEC20P28791 383 aa5.56□□□□□ -1.52
SSO2YMR183C VPS35P34110 944 aa5.56□□□□□ -1.52
SSO2YMR183C SEG2P34250 1132 aa5.56□□□□□ -1.52
SSO2YMR183C GCV1P48015 400 aa5.56□□□□□ -1.52
SSO2YMR183C YMR074CQ04773 145 aa5.56□□□□□ -1.52
SSO2YMR183C YCS4Q06156 1176 aa5.56□□□□□ -1.52
SSO2YMR183C YOR223WQ12015 292 aa5.56□□□□□ -1.52
SSO2YMR183C PHO4P07270 312 aaKnown RBP5.55□□□□□ -1.52
SSO2YMR183C GCD6P32501 712 aaKnown RBP5.55□□□□□ -1.52
SSO2YMR183C SEA4P38164 1038 aa5.55□□□□□ -1.52
SSO2YMR183C UTP22P53254 1237 aaPredicted RBP5.55□□□□□ -1.52
SSO2YMR183C MCM5P29496 775 aaKnown RBP5.54□□□□□ -1.52
SSO2YMR183C MET4P32389 672 aa5.54□□□□□ -1.52
SSO2YMR183C MON1P53129 644 aa5.54□□□□□ -1.52
SSO2YMR183C MEC3Q02574 474 aa5.54□□□□□ -1.52
SSO2YMR183C SEN54Q02825 467 aaPredicted RBP5.54□□□□□ -1.52
SSO2YMR183C LRG1P35688 1017 aa5.53□□□□□ -1.52
SSO2YMR183C WHI5Q12416 295 aa5.53□□□□□ -1.52
SSO2YMR183C SLD2P34252 453 aa5.52□□□□□ -1.53
SSO2YMR183C SHU2P38957 223 aa5.52□□□□□ -1.53
SSO2YMR183C THI12P42883 340 aa5.52□□□□□ -1.53
SSO2YMR183C THI5P43534 340 aa5.52□□□□□ -1.53
SSO2YMR183C THI11P47183 340 aa5.52□□□□□ -1.53
SSO2YMR183C GIC2Q06648 383 aa5.52□□□□□ -1.53
SSO2YMR183C THI13Q07748 340 aa5.52□□□□□ -1.53
SSO2YMR183C PRP40P33203 583 aaKnown RBP5.51□□□□□ -1.53
SSO2YMR183C ARL1P38116 183 aaKnown RBP5.51□□□□□ -1.53
SSO2YMR183C IPL1P38991 367 aa5.51□□□□□ -1.53
SSO2YMR183C DAK2P43550 591 aa5.51□□□□□ -1.53
SSO2YMR183C DOT1Q04089 582 aaKnown RBP5.51□□□□□ -1.53
SSO2YMR183C KAR2P16474 682 aaKnown RBP5.5□□□□□ -1.53
SSO2YMR183C MSB1P21339 1137 aaKnown RBP5.5□□□□□ -1.53
SSO2YMR183C YKL077WP36081 392 aa5.5□□□□□ -1.53
SSO2YMR183C GPT2P36148 743 aa5.5□□□□□ -1.53
SSO2YMR183C REI1P38344 393 aaPredicted RBP5.5□□□□□ -1.53
SSO2YMR183C NIT1P40447 199 aa5.5□□□□□ -1.53
SSO2YMR183C NOP7P53261 605 aaKnown RBP5.5□□□□□ -1.53
SSO2YMR183C NOG1Q02892 647 aaKnown RBP5.5□□□□□ -1.53
SSO2YMR183C ESC8Q08119 714 aa5.5□□□□□ -1.53
SSO2YMR183C OXR1Q08952 273 aa5.5□□□□□ -1.53
SSO2YMR183C TY1A-LR4P0C2I8 440 aaKnown RBP5.49□□□□□ -1.53
SSO2YMR183C TY1A-DR6P0CX70 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-ER1P0CX71 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-LR2P0CX72 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-PLP0CX73 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-JR1P0CX74 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-LR3P0CX75 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-ML2P0CX76 440 aa5.49□□□□□ -1.53
SSO2YMR183C EXO5P38289 585 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-GR1Q12085 440 aa5.49□□□□□ -1.53
SSO2YMR183C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.49□□□□□ -1.53
SSO2YMR183C TY1A-OLQ92392 440 aaKnown RBP5.49□□□□□ -1.53
SSO2YMR183C DAL4Q04895 635 aa5.48□□□□□ -1.53
SSO2YMR183C ALG6Q12001 544 aaKnown RBP5.48□□□□□ -1.53
SSO2YMR183C SDH1Q00711 640 aa5.47□□□□□ -1.53
SSO2YMR183C ULP1Q02724 621 aa5.47□□□□□ -1.53
SSO2YMR183C UGA4P32837 571 aa5.46□□□□□ -1.54
SSO2YMR183C MMM1P41800 426 aa5.46□□□□□ -1.54
SSO2YMR183C TAF1P46677 1066 aa5.46□□□□□ -1.54
SSO2YMR183C TOS4Q06266 489 aa5.46□□□□□ -1.54
SSO2YMR183C MSH3P25336 1018 aa5.45□□□□□ -1.54
SSO2YMR183C RPT1P33299 467 aaKnown RBP5.45□□□□□ -1.54
SSO2YMR183C POL12P38121 705 aaPredicted RBP5.45□□□□□ -1.54
SSO2YMR183C SLS1P42900 643 aa5.45□□□□□ -1.54
SSO2YMR183C YGR045CP53229 120 aa5.45□□□□□ -1.54
SSO2YMR183C AVO1Q08236 1176 aa5.45□□□□□ -1.54
SSO2YMR183C SQT1P35184 431 aa5.44□□□□□ -1.54
SSO2YMR183C NEM1P38757 446 aa5.44□□□□□ -1.54
SSO2YMR183C MSH4P40965 878 aaPredicted RBP5.44□□□□□ -1.54
SSO2YMR183C CIT3P43635 486 aa5.44□□□□□ -1.54
SSO2YMR183C MTR4P47047 1073 aaKnown RBP5.44□□□□□ -1.54
SSO2YMR183C RSM26P47141 266 aa5.44□□□□□ -1.54
SSO2YMR183C ECL1P48235 211 aa5.44□□□□□ -1.54
SSO2YMR183C ALT1P52893 592 aa5.44□□□□□ -1.54
SSO2YMR183C PEX13P80667 386 aa5.44□□□□□ -1.54
SSO2YMR183C YPL109CQ02981 657 aa5.44□□□□□ -1.54
SSO2YMR183C YOR059CQ08448 450 aaKnown RBP5.44□□□□□ -1.54
SSO2YMR183C HXK1P04806 485 aaKnown RBP5.43□□□□□ -1.54
SSO2YMR183C RPS4AP0CX35 261 aaKnown RBP5.43□□□□□ -1.54
SSO2YMR183C RPS4BP0CX36 261 aaKnown RBP5.43□□□□□ -1.54
SSO2YMR183C WHI3P34761 661 aaKnown RBP5.43□□□□□ -1.54
SSO2YMR183C GIP4P39732 760 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms