RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W BDH2P39713 417 aa8.58□□□□□ -1.04
SNF7YLR025W NPA3P47122 385 aa8.58□□□□□ -1.04
SNF7YLR025W HST1P53685 503 aa8.58□□□□□ -1.04
SNF7YLR025W PHM7Q12252 991 aa8.58□□□□□ -1.04
SNF7YLR025W RPL19AP0CX82 189 aaKnown RBP8.57□□□□□ -1.04
SNF7YLR025W RPL19BP0CX83 189 aaPredicted RBP8.57□□□□□ -1.04
SNF7YLR025W ATG3P40344 310 aa8.57□□□□□ -1.04
SNF7YLR025W YGL082WP53155 381 aa8.57□□□□□ -1.04
SNF7YLR025W HED1Q03937 162 aa8.57□□□□□ -1.04
SNF7YLR025W RAS1P01119 309 aa8.56□□□□□ -1.04
SNF7YLR025W PRP40P33203 583 aaKnown RBP8.56□□□□□ -1.04
SNF7YLR025W CAB3P36076 571 aa8.56□□□□□ -1.04
SNF7YLR025W LCD1Q04377 747 aa8.56□□□□□ -1.04
SNF7YLR025W TRL1P09880 827 aaKnown RBP8.55□□□□□ -1.04
SNF7YLR025W SSA4P22202 642 aaKnown RBP8.55□□□□□ -1.04
SNF7YLR025W SLA1P32790 1244 aa8.55□□□□□ -1.04
SNF7YLR025W AAP1P37898 856 aaKnown RBP8.55□□□□□ -1.04
SNF7YLR025W ENP2P48234 707 aaKnown RBP8.55□□□□□ -1.04
SNF7YLR025W RSC1P53236 928 aa8.55□□□□□ -1.04
SNF7YLR025W MRPS35P53292 345 aa8.55□□□□□ -1.04
SNF7YLR025W ALO1P54783 526 aaKnown RBP8.55□□□□□ -1.04
SNF7YLR025W MTC5Q03897 1148 aa8.55□□□□□ -1.04
SNF7YLR025W RRI2Q12348 645 aa8.55□□□□□ -1.04
SNF7YLR025W YRF1-3P0CX14 1859 aa8.54□□□□□ -1.04
SNF7YLR025W YRF1-7P0CX15 1859 aa8.54□□□□□ -1.04
SNF7YLR025W YRF1-6P53819 1859 aa8.54□□□□□ -1.04
SNF7YLR025W SPO22P40511 975 aa8.54□□□□□ -1.04
SNF7YLR025W UTP13Q05946 817 aaKnown RBP8.54□□□□□ -1.04
SNF7YLR025W ETT1Q08421 412 aaKnown RBP8.54□□□□□ -1.04
SNF7YLR025W RDS2P19541 446 aaKnown RBP8.53□□□□□ -1.04
SNF7YLR025W OSH3P38713 996 aaKnown RBP8.53□□□□□ -1.04
SNF7YLR025W DOT5P40553 215 aa8.53□□□□□ -1.04
SNF7YLR025W APL6P46682 809 aa8.53□□□□□ -1.04
SNF7YLR025W FCP1Q03254 732 aa8.53□□□□□ -1.04
SNF7YLR025W HRQ1Q05549 1077 aa8.53□□□□□ -1.04
SNF7YLR025W ESF1Q06344 628 aaKnown RBP8.53□□□□□ -1.04
SNF7YLR025W SSK22P25390 1331 aaPredicted RBP8.53□□□□□ -1.04
SNF7YLR025W PEP12P32854 288 aa8.52□□□□□ -1.05
SNF7YLR025W MIC60P36112 540 aa8.52□□□□□ -1.05
SNF7YLR025W PIL1P53252 339 aaKnown RBP8.52□□□□□ -1.05
SNF7YLR025W RPN12P32496 274 aa8.51□□□□□ -1.05
SNF7YLR025W RVS167P39743 482 aaKnown RBP8.51□□□□□ -1.05
SNF7YLR025W EMW1P42842 904 aaKnown RBP8.51□□□□□ -1.05
SNF7YLR025W ENT3P47160 408 aa8.51□□□□□ -1.05
SNF7YLR025W FOX2Q02207 900 aaKnown RBP8.51□□□□□ -1.05
SNF7YLR025W PEX19Q07418 342 aa8.51□□□□□ -1.05
SNF7YLR025W PSK2Q08217 1101 aa8.51□□□□□ -1.05
SNF7YLR025W APC11Q12157 165 aa8.51□□□□□ -1.05
SNF7YLR025W SEC18P18759 758 aaKnown RBP8.5□□□□□ -1.05
SNF7YLR025W KNS1P32350 737 aaPredicted RBP8.5□□□□□ -1.05
SNF7YLR025W PRX1P34227 261 aaKnown RBP8.5□□□□□ -1.05
SNF7YLR025W HYR1P40581 163 aaKnown RBP8.5□□□□□ -1.05
SNF7YLR025W CTF18P49956 741 aa8.5□□□□□ -1.05
SNF7YLR025W SUB2Q07478 446 aaKnown RBP8.5□□□□□ -1.05
SNF7YLR025W AIM44Q99299 758 aa8.5□□□□□ -1.05
SNF7YLR025W MRT4P33201 236 aaKnown RBP8.49□□□□□ -1.05
SNF7YLR025W EBP2P36049 427 aaKnown RBP8.49□□□□□ -1.05
SNF7YLR025W DID4P36108 232 aa8.49□□□□□ -1.05
SNF7YLR025W CIC1P38779 376 aaKnown RBP8.49□□□□□ -1.05
SNF7YLR025W CIR1P42940 261 aa8.49□□□□□ -1.05
SNF7YLR025W YKE2P52553 114 aa8.49□□□□□ -1.05
SNF7YLR025W ESC2Q06340 456 aa8.49□□□□□ -1.05
SNF7YLR025W KTR3P38130 404 aaPredicted RBP8.48□□□□□ -1.05
SNF7YLR025W AIM9P40053 627 aaKnown RBP8.48□□□□□ -1.05
SNF7YLR025W CCT5P40413 562 aaKnown RBP8.48□□□□□ -1.05
SNF7YLR025W BUD6P41697 788 aa8.48□□□□□ -1.05
SNF7YLR025W CWH41P53008 833 aa8.48□□□□□ -1.05
SNF7YLR025W YNL193WP53870 558 aa8.48□□□□□ -1.05
SNF7YLR025W ATG20Q07528 640 aa8.48□□□□□ -1.05
SNF7YLR025W HAT1Q12341 374 aa8.48□□□□□ -1.05
SNF7YLR025W TAF13P11747 167 aa8.47□□□□□ -1.05
SNF7YLR025W OPI1P21957 404 aa8.47□□□□□ -1.05
SNF7YLR025W IMP2'P32351 346 aa8.47□□□□□ -1.05
SNF7YLR025W YKR075CP36155 307 aa8.47□□□□□ -1.05
SNF7YLR025W RKM3P38222 552 aa8.47□□□□□ -1.05
SNF7YLR025W SOH1P38633 127 aa8.47□□□□□ -1.05
SNF7YLR025W RRP8P38961 392 aaKnown RBP8.47□□□□□ -1.05
SNF7YLR025W VID28P40547 921 aa8.47□□□□□ -1.05
SNF7YLR025W PIB2P53191 635 aa8.47□□□□□ -1.05
SNF7YLR025W RPN7Q06103 429 aaKnown RBP8.47□□□□□ -1.05
SNF7YLR025W PIF1P07271 859 aa8.46□□□□□ -1.06
SNF7YLR025W YHL017WP38745 532 aa8.46□□□□□ -1.06
SNF7YLR025W CLA4P48562 842 aa8.46□□□□□ -1.06
SNF7YLR025W SRC1Q03707 834 aa8.46□□□□□ -1.06
SNF7YLR025W PGA3Q12746 312 aaKnown RBP8.46□□□□□ -1.06
SNF7YLR025W CDC4P07834 779 aa8.45□□□□□ -1.06
SNF7YLR025W TGL4P36165 910 aa8.45□□□□□ -1.06
SNF7YLR025W ELG1Q12050 791 aa8.45□□□□□ -1.06
SNF7YLR025W SSF2Q12153 453 aaPredicted RBP8.45□□□□□ -1.06
SNF7YLR025W RIM15P43565 1770 aa8.44□□□□□ -1.06
SNF7YLR025W UBP1P25037 809 aa8.44□□□□□ -1.06
SNF7YLR025W PEP3P27801 918 aa8.44□□□□□ -1.06
SNF7YLR025W YMR147WP40218 223 aaKnown RBP8.44□□□□□ -1.06
SNF7YLR025W RPN11P43588 306 aaKnown RBP8.44□□□□□ -1.06
SNF7YLR025W ISR1Q06098 443 aaKnown RBP8.44□□□□□ -1.06
SNF7YLR025W BUG1Q12191 341 aa8.44□□□□□ -1.06
SNF7YLR025W NYV1Q12255 253 aa8.44□□□□□ -1.06
SNF7YLR025W SAC3P46674 1301 aa8.44□□□□□ -1.06
SNF7YLR025W CPA2P03965 1118 aaKnown RBP8.43□□□□□ -1.06
SNF7YLR025W NGR1P32831 672 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms