RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C GRC3Q07845 632 aa6.52□□□□□ -1.37
SSK1YLR006C YEL077CQ3E7X8 1277 aa6.52□□□□□ -1.37
SSK1YLR006C TPM1P17536 199 aaKnown RBP6.52□□□□□ -1.37
SSK1YLR006C ABZ1P37254 787 aaPredicted RBP6.52□□□□□ -1.37
SSK1YLR006C MSH4P40965 878 aaPredicted RBP6.52□□□□□ -1.37
SSK1YLR006C MDJ2P42834 146 aa6.52□□□□□ -1.37
SSK1YLR006C YNL011CP53980 444 aa6.52□□□□□ -1.37
SSK1YLR006C ESC2Q06340 456 aa6.52□□□□□ -1.37
SSK1YLR006C RIM20Q12033 661 aa6.52□□□□□ -1.37
SSK1YLR006C MNL2Q12205 849 aa6.52□□□□□ -1.37
SSK1YLR006C BOI1P38041 980 aaKnown RBP6.51□□□□□ -1.37
SSK1YLR006C DAK2P43550 591 aa6.51□□□□□ -1.37
SSK1YLR006C HOL1P53389 586 aa6.51□□□□□ -1.37
SSK1YLR006C YPR172WQ06608 200 aa6.51□□□□□ -1.37
SSK1YLR006C TSR3Q12094 313 aaKnown RBP6.51□□□□□ -1.37
SSK1YLR006C SGT2Q12118 346 aaKnown RBP6.51□□□□□ -1.37
SSK1YLR006C NOP58Q12499 511 aaKnown RBP6.51□□□□□ -1.37
SSK1YLR006C ECM21P38167 1117 aaKnown RBP6.5□□□□□ -1.37
SSK1YLR006C ENT3P47160 408 aa6.5□□□□□ -1.37
SSK1YLR006C CWH41P53008 833 aa6.5□□□□□ -1.37
SSK1YLR006C ELA1P53861 379 aaPredicted RBP6.5□□□□□ -1.37
SSK1YLR006C BNI5P53890 448 aaKnown RBP6.5□□□□□ -1.37
SSK1YLR006C VPS64Q03944 604 aa6.5□□□□□ -1.37
SSK1YLR006C PEX19Q07418 342 aa6.5□□□□□ -1.37
SSK1YLR006C BDF2Q07442 638 aa6.5□□□□□ -1.37
SSK1YLR006C INP54Q08227 384 aaKnown RBP6.5□□□□□ -1.37
SSK1YLR006C PPM2Q08282 695 aa6.5□□□□□ -1.37
SSK1YLR006C HOM3P10869 527 aa6.5□□□□□ -1.37
SSK1YLR006C TFC3P34111 1160 aa6.5□□□□□ -1.37
SSK1YLR006C HSE1P38753 452 aa6.5□□□□□ -1.37
SSK1YLR006C VPS29P38759 282 aa6.5□□□□□ -1.37
SSK1YLR006C APE4P38821 490 aa6.5□□□□□ -1.37
SSK1YLR006C SWI1P09547 1314 aa6.5□□□□□ -1.37
SSK1YLR006C RPL19AP0CX82 189 aaKnown RBP6.49□□□□□ -1.37
SSK1YLR006C RPL19BP0CX83 189 aaPredicted RBP6.49□□□□□ -1.37
SSK1YLR006C UBP1P25037 809 aa6.49□□□□□ -1.37
SSK1YLR006C SLA1P32790 1244 aa6.49□□□□□ -1.37
SSK1YLR006C STO1P34160 861 aaKnown RBP6.49□□□□□ -1.37
SSK1YLR006C AAP1P37898 856 aaKnown RBP6.49□□□□□ -1.37
SSK1YLR006C CSN12P47130 423 aa6.49□□□□□ -1.37
SSK1YLR006C PEX14P53112 341 aa6.49□□□□□ -1.37
SSK1YLR006C SXM1Q04175 944 aaKnown RBP6.49□□□□□ -1.37
SSK1YLR006C TCB1Q12466 1186 aa6.49□□□□□ -1.37
SSK1YLR006C RXT2P38255 430 aa6.49□□□□□ -1.37
SSK1YLR006C YAP1801P38856 637 aa6.49□□□□□ -1.37
SSK1YLR006C OCA1P50946 238 aaPredicted RBP6.49□□□□□ -1.37
SSK1YLR006C YGR016WP53209 190 aa6.49□□□□□ -1.37
SSK1YLR006C MEC3Q02574 474 aa6.49□□□□□ -1.37
SSK1YLR006C SPO71Q03868 1245 aa6.49□□□□□ -1.37
SSK1YLR006C KAR5Q04746 504 aa6.49□□□□□ -1.37
SSK1YLR006C VIP1Q06685 1146 aaKnown RBP6.49□□□□□ -1.37
SSK1YLR006C AVO1Q08236 1176 aa6.49□□□□□ -1.37
SSK1YLR006C PRX1P34227 261 aaKnown RBP6.48□□□□□ -1.37
SSK1YLR006C TIM54P47045 478 aa6.48□□□□□ -1.37
SSK1YLR006C MRPS35P53292 345 aa6.48□□□□□ -1.37
SSK1YLR006C KRE33P53914 1056 aaKnown RBP6.48□□□□□ -1.37
SSK1YLR006C LPD1P09624 499 aaKnown RBP6.47□□□□□ -1.37
SSK1YLR006C RPL34BP40525 121 aaKnown RBP6.47□□□□□ -1.37
SSK1YLR006C HYR1P40581 163 aaKnown RBP6.47□□□□□ -1.37
SSK1YLR006C REF2P42073 533 aaPredicted RBP6.47□□□□□ -1.37
SSK1YLR006C BNA1P47096 177 aa6.47□□□□□ -1.37
SSK1YLR006C CTF18P49956 741 aa6.47□□□□□ -1.37
SSK1YLR006C MTO1P53070 669 aa6.47□□□□□ -1.37
SSK1YLR006C VPS16Q03308 798 aa6.47□□□□□ -1.37
SSK1YLR006C SPO20Q04359 397 aa6.47□□□□□ -1.37
SSK1YLR006C SES1P07284 462 aaKnown RBP6.47□□□□□ -1.37
SSK1YLR006C STI1P15705 589 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SSK1YLR006C POL4P25615 582 aa6.47□□□□□ -1.37
SSK1YLR006C URA1P28272 314 aaPredicted RBP6.47□□□□□ -1.37
SSK1YLR006C MRPL10P36520 322 aa6.47□□□□□ -1.37
SSK1YLR006C MLC1P53141 149 aa6.47□□□□□ -1.37
SSK1YLR006C SSL2Q00578 843 aa6.47□□□□□ -1.37
SSK1YLR006C RTP1Q12751 981 aa6.47□□□□□ -1.37
SSK1YLR006C MRC1P25588 1096 aa6.46□□□□□ -1.37
SSK1YLR006C DPB3P27344 201 aa6.46□□□□□ -1.37
SSK1YLR006C AIM9P40053 627 aaKnown RBP6.46□□□□□ -1.37
SSK1YLR006C CCT5P40413 562 aaKnown RBP6.46□□□□□ -1.37
SSK1YLR006C FYV10P40492 516 aa6.46□□□□□ -1.37
SSK1YLR006C EMP47P43555 445 aa6.46□□□□□ -1.37
SSK1YLR006C ARP5P53946 755 aa6.46□□□□□ -1.37
SSK1YLR006C VTC3Q02725 835 aa6.46□□□□□ -1.37
SSK1YLR006C SLX4Q12098 748 aa6.46□□□□□ -1.37
SSK1YLR006C TRS33Q99394 268 aa6.46□□□□□ -1.37
SSK1YLR006C UTP10P42945 1769 aaKnown RBP6.46□□□□□ -1.38
SSK1YLR006C YKL222CP35995 705 aa6.46□□□□□ -1.38
SSK1YLR006C ACF4P47129 309 aa6.46□□□□□ -1.38
SSK1YLR006C FPK1P53739 893 aa6.46□□□□□ -1.38
SSK1YLR006C APC5Q08683 685 aa6.46□□□□□ -1.38
SSK1YLR006C YPL191CQ08930 360 aa6.46□□□□□ -1.38
SSK1YLR006C YRF1-3P0CX14 1859 aa6.45□□□□□ -1.38
SSK1YLR006C YRF1-7P0CX15 1859 aa6.45□□□□□ -1.38
SSK1YLR006C YRF1-6P53819 1859 aa6.45□□□□□ -1.38
SSK1YLR006C COX6P00427 148 aa6.45□□□□□ -1.38
SSK1YLR006C MET6P05694 767 aaKnown RBP6.45□□□□□ -1.38
SSK1YLR006C CYC8P14922 966 aa6.45□□□□□ -1.38
SSK1YLR006C FRS2P15625 503 aaKnown RBP6.45□□□□□ -1.38
SSK1YLR006C PEX6P33760 1030 aa6.45□□□□□ -1.38
SSK1YLR006C PEX5P35056 612 aa6.45□□□□□ -1.38
SSK1YLR006C VID28P40547 921 aa6.45□□□□□ -1.38
SSK1YLR006C RAD17P48581 401 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms