RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C TAF2P23255 1407 aa6.5□□□□□ -1.37
TVP38YKR088C POL1P13382 1468 aa6.49□□□□□ -1.37
TVP38YKR088C OYE3P41816 400 aaPredicted RBP6.49□□□□□ -1.37
TVP38YKR088C STU1P38198 1513 aa6.49□□□□□ -1.37
TVP38YKR088C ADP1P25371 1049 aa6.48□□□□□ -1.37
TVP38YKR088C FUR4P05316 633 aaKnown RBP6.47□□□□□ -1.37
TVP38YKR088C RPS4AP0CX35 261 aaKnown RBP6.47□□□□□ -1.37
TVP38YKR088C RPS4BP0CX36 261 aaKnown RBP6.47□□□□□ -1.37
TVP38YKR088C SSA4P22202 642 aaKnown RBP6.47□□□□□ -1.37
TVP38YKR088C TSA1P34760 196 aaKnown RBP6.47□□□□□ -1.37
TVP38YKR088C YIG1Q08956 461 aa6.47□□□□□ -1.37
TVP38YKR088C GIP4P39732 760 aa6.46□□□□□ -1.38
TVP38YKR088C UFD4P33202 1483 aa6.46□□□□□ -1.38
TVP38YKR088C TAF1P46677 1066 aa6.45□□□□□ -1.38
TVP38YKR088C YTA7P40340 1379 aa6.44□□□□□ -1.38
TVP38YKR088C ORC3P54790 616 aa6.44□□□□□ -1.38
TVP38YKR088C NOB1Q08444 459 aaKnown RBP6.44□□□□□ -1.38
TVP38YKR088C ECM2P38241 364 aaKnown RBP6.43□□□□□ -1.38
TVP38YKR088C SSY1Q03770 852 aa6.43□□□□□ -1.38
TVP38YKR088C MSH6Q03834 1242 aa6.43□□□□□ -1.38
TVP38YKR088C TRE1Q08919 783 aa6.43□□□□□ -1.38
TVP38YKR088C HTS1P07263 546 aaKnown RBP6.42□□□□□ -1.38
TVP38YKR088C THI80P35202 319 aa6.42□□□□□ -1.38
TVP38YKR088C CTR9P89105 1077 aa6.42□□□□□ -1.38
TVP38YKR088C MEC3Q02574 474 aa6.42□□□□□ -1.38
TVP38YKR088C TAF7Q05021 590 aa6.42□□□□□ -1.38
TVP38YKR088C YPK9Q12697 1472 aa6.41□□□□□ -1.38
TVP38YKR088C NPR1P22211 790 aa6.41□□□□□ -1.38
TVP38YKR088C MSH4P40965 878 aaPredicted RBP6.41□□□□□ -1.38
TVP38YKR088C ALT1P52893 592 aa6.41□□□□□ -1.38
TVP38YKR088C ECM5Q03214 1411 aa6.41□□□□□ -1.38
TVP38YKR088C BUD4P47136 1447 aa6.4□□□□□ -1.39
TVP38YKR088C TRM732Q03496 1420 aa6.4□□□□□ -1.39
TVP38YKR088C BPT1P14772 1559 aa6.4□□□□□ -1.39
TVP38YKR088C ATG2P53855 1592 aa6.4□□□□□ -1.39
TVP38YKR088C PRP6P19735 899 aaPredicted RBP6.39□□□□□ -1.39
TVP38YKR088C REI1P38344 393 aaPredicted RBP6.39□□□□□ -1.39
TVP38YKR088C CMR1Q12510 522 aaKnown RBP6.39□□□□□ -1.39
TVP38YKR088C PRO1P32264 428 aa6.38□□□□□ -1.39
TVP38YKR088C RIM11P38615 370 aa6.38□□□□□ -1.39
TVP38YKR088C BOL3P39724 118 aa6.38□□□□□ -1.39
TVP38YKR088C UTP22P53254 1237 aaPredicted RBP6.38□□□□□ -1.39
TVP38YKR088C EAR1Q03212 550 aa6.38□□□□□ -1.39
TVP38YKR088C ALG6Q12001 544 aaKnown RBP6.38□□□□□ -1.39
TVP38YKR088C YVC1Q12324 675 aa6.38□□□□□ -1.39
TVP38YKR088C MYO4P32492 1471 aa6.37□□□□□ -1.39
TVP38YKR088C DNA2P38859 1522 aa6.36□□□□□ -1.39
TVP38YKR088C YOR1P53049 1477 aa6.36□□□□□ -1.39
TVP38YKR088C SCC2Q04002 1493 aa6.36□□□□□ -1.39
TVP38YKR088C IKI3Q06706 1349 aaKnown RBP6.36□□□□□ -1.39
TVP38YKR088C COBP00163 385 aa6.36□□□□□ -1.39
TVP38YKR088C PRP5P21372 849 aaPredicted RBP6.36□□□□□ -1.39
TVP38YKR088C NFS1P25374 497 aa6.36□□□□□ -1.39
TVP38YKR088C FLR1P38124 548 aa6.36□□□□□ -1.39
TVP38YKR088C PEX7P39108 375 aa6.36□□□□□ -1.39
TVP38YKR088C LPX1Q12405 387 aaKnown RBP6.36□□□□□ -1.39
TVP38YKR088C HDA2Q06629 674 aa6.35□□□□□ -1.39
TVP38YKR088C RKR1Q04781 1562 aa6.35□□□□□ -1.39
TVP38YKR088C SMY2P32909 740 aaKnown RBP6.34□□□□□ -1.39
TVP38YKR088C UFD2P54860 961 aa6.34□□□□□ -1.39
TVP38YKR088C RSC4Q02206 625 aa6.34□□□□□ -1.39
TVP38YKR088C AIM3P38266 947 aaKnown RBP6.33□□□□□ -1.4
TVP38YKR088C PTC7P38797 343 aa6.33□□□□□ -1.4
TVP38YKR088C NUP170P38181 1502 aa6.33□□□□□ -1.4
TVP38YKR088C DUR3P33413 735 aa6.32□□□□□ -1.4
TVP38YKR088C NNK1P36003 928 aa6.32□□□□□ -1.4
TVP38YKR088C ELA1P53861 379 aaPredicted RBP6.32□□□□□ -1.4
TVP38YKR088C MRPL22P53881 309 aa6.32□□□□□ -1.4
TVP38YKR088C AVO1Q08236 1176 aa6.32□□□□□ -1.4
TVP38YKR088C RIM8P53179 542 aa6.31□□□□□ -1.4
TVP38YKR088C YGR045CP53229 120 aa6.31□□□□□ -1.4
TVP38YKR088C SPP41P38904 1435 aa6.31□□□□□ -1.4
TVP38YKR088C GTS1P40956 396 aa6.3□□□□□ -1.4
TVP38YKR088C SMC4Q12267 1418 aa6.3□□□□□ -1.4
TVP38YKR088C PEP1P32319 1579 aa6.3□□□□□ -1.4
TVP38YKR088C RPO31P04051 1460 aa6.29□□□□□ -1.4
TVP38YKR088C ARL1P38116 183 aaKnown RBP6.29□□□□□ -1.4
TVP38YKR088C GLO3P38682 493 aaKnown RBP6.29□□□□□ -1.4
TVP38YKR088C TOP2P06786 1428 aaKnown RBP6.28□□□□□ -1.4
TVP38YKR088C GIS1Q03833 894 aa6.28□□□□□ -1.4
TVP38YKR088C SNQ2P32568 1501 aaKnown RBP6.28□□□□□ -1.4
TVP38YKR088C KOG1P38873 1557 aa6.27□□□□□ -1.41
TVP38YKR088C NOP2P40991 618 aaKnown RBP6.27□□□□□ -1.41
TVP38YKR088C PMT7Q06644 662 aa6.27□□□□□ -1.41
TVP38YKR088C YDL177CQ12257 170 aa6.27□□□□□ -1.41
TVP38YKR088C SAP155P43612 1002 aa6.26□□□□□ -1.41
TVP38YKR088C ETP1P38748 585 aaKnown RBP6.25□□□□□ -1.41
TVP38YKR088C QDR1P40475 563 aa6.25□□□□□ -1.41
TVP38YKR088C YNL011CP53980 444 aa6.25□□□□□ -1.41
TVP38YKR088C BSC2Q05611 235 aa6.25□□□□□ -1.41
TVP38YKR088C PUS7Q08647 676 aaKnown RBP6.25□□□□□ -1.41
TVP38YKR088C YCF1P39109 1515 aaKnown RBP6.25□□□□□ -1.41
TVP38YKR088C SSM4P40318 1319 aa6.25□□□□□ -1.41
TVP38YKR088C SOD2P00447 233 aa6.24□□□□□ -1.41
TVP38YKR088C FOL2P51601 243 aaKnown RBP6.24□□□□□ -1.41
TVP38YKR088C YAF9P53930 226 aa6.24□□□□□ -1.41
TVP38YKR088C TPP1Q03796 238 aa6.24□□□□□ -1.41
TVP38YKR088C GSF2Q04697 403 aaKnown RBP6.24□□□□□ -1.41
TVP38YKR088C KAR5Q04746 504 aa6.24□□□□□ -1.41
TVP38YKR088C STH1P32597 1359 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms