RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeastyeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOA1YKL213C RAD53P22216 821 aa5.59□□□□□ -1.51
DOA1YKL213C ASH1P34233 588 aa5.59□□□□□ -1.51
DOA1YKL213C TPS3P38426 1054 aaKnown RBP5.59□□□□□ -1.51
DOA1YKL213C YHL050CP38721 697 aa5.59□□□□□ -1.51
DOA1YKL213C CIC1P38779 376 aaKnown RBP5.59□□□□□ -1.51
DOA1YKL213C YIR014WP40570 242 aa5.59□□□□□ -1.51
DOA1YKL213C MSH4P40965 878 aaPredicted RBP5.59□□□□□ -1.51
DOA1YKL213C RCF1Q03713 159 aa5.59□□□□□ -1.51
DOA1YKL213C GIR2Q03768 265 aaPredicted RBP5.59□□□□□ -1.51
DOA1YKL213C APL5Q08951 932 aaKnown RBP5.59□□□□□ -1.51
DOA1YKL213C PCL8Q08966 492 aa5.59□□□□□ -1.51
DOA1YKL213C KEL3Q08979 651 aaPredicted RBP5.59□□□□□ -1.51
DOA1YKL213C CFT2Q12102 859 aaPredicted RBP5.59□□□□□ -1.51
DOA1YKL213C TRL1P09880 827 aaKnown RBP5.59□□□□□ -1.52
DOA1YKL213C MCM1P11746 286 aa5.59□□□□□ -1.52
DOA1YKL213C ADP1P25371 1049 aa5.59□□□□□ -1.52
DOA1YKL213C CRG1P38892 291 aaRIP-Chip data5.59□□□□□ -1.52not detected
DOA1YKL213C UFD2P54860 961 aa5.59□□□□□ -1.52
DOA1YKL213C MEH1Q02205 184 aa5.59□□□□□ -1.52
DOA1YKL213C MRD1Q06106 887 aaKnown RBP5.59□□□□□ -1.52
DOA1YKL213C PMA1P05030 918 aaKnown RBP5.58□□□□□ -1.52
DOA1YKL213C AIM9P40053 627 aaKnown RBP5.58□□□□□ -1.52
DOA1YKL213C SPO22P40511 975 aa5.58□□□□□ -1.52
DOA1YKL213C DJP1P40564 432 aa5.58□□□□□ -1.52
DOA1YKL213C RPS15Q01855 142 aaKnown RBP5.58□□□□□ -1.52
DOA1YKL213C SPN1Q06505 410 aaPredicted RBP5.58□□□□□ -1.52
DOA1YKL213C PGA3Q12746 312 aaKnown RBP5.58□□□□□ -1.52
DOA1YKL213C GAL11P19659 1081 aa5.57□□□□□ -1.52
DOA1YKL213C PEP3P27801 918 aa5.57□□□□□ -1.52
DOA1YKL213C IMP2'P32351 346 aa5.57□□□□□ -1.52
DOA1YKL213C CBF5P33322 483 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
DOA1YKL213C YDR341CQ05506 607 aaKnown RBP5.57□□□□□ -1.52
DOA1YKL213C PIB1Q06651 286 aa5.57□□□□□ -1.52
DOA1YKL213C PSK2Q08217 1101 aa5.57□□□□□ -1.52
DOA1YKL213C RAD61Q99359 647 aa5.57□□□□□ -1.52
DOA1YKL213C RNR2P09938 399 aaKnown RBP5.57□□□□□ -1.52
DOA1YKL213C KIN1P13185 1064 aa5.57□□□□□ -1.52
DOA1YKL213C MAC1P35192 417 aa5.57□□□□□ -1.52
DOA1YKL213C RER2P35196 286 aa5.57□□□□□ -1.52
DOA1YKL213C PAM1P37304 830 aaKnown RBP5.57□□□□□ -1.52
DOA1YKL213C YBL028CP38202 106 aa5.57□□□□□ -1.52
DOA1YKL213C VID27P40157 782 aa5.57□□□□□ -1.52
DOA1YKL213C SYH1Q02875 849 aaKnown RBP5.57□□□□□ -1.52
DOA1YKL213C SGD1Q06132 899 aa5.57□□□□□ -1.52
DOA1YKL213C PRE8P23639 250 aa5.56□□□□□ -1.52
DOA1YKL213C MYO3P36006 1272 aa5.56□□□□□ -1.52
DOA1YKL213C SPR3P41901 512 aa5.56□□□□□ -1.52
DOA1YKL213C ESF1Q06344 628 aaKnown RBP5.56□□□□□ -1.52
DOA1YKL213C YDL124WQ07551 312 aaKnown RBP5.56□□□□□ -1.52
DOA1YKL213C MPH3P0CE00 602 aa5.56□□□□□ -1.52
DOA1YKL213C SRM1P21827 482 aa5.56□□□□□ -1.52
DOA1YKL213C ANP1P32629 500 aa5.56□□□□□ -1.52
DOA1YKL213C ACA1P39970 489 aa5.56□□□□□ -1.52
DOA1YKL213C SEC27P41811 889 aaKnown RBP5.56□□□□□ -1.52
DOA1YKL213C YLR225CQ05948 407 aaKnown RBP5.56□□□□□ -1.52
DOA1YKL213C RIT1P23796 513 aa5.55□□□□□ -1.52
DOA1YKL213C PRO3P32263 286 aaKnown RBP5.55□□□□□ -1.52
DOA1YKL213C VPS8P39702 1274 aa5.55□□□□□ -1.52
DOA1YKL213C TAN1P53072 289 aaPredicted RBP5.55□□□□□ -1.52
DOA1YKL213C HDA1P53973 706 aa5.55□□□□□ -1.52
DOA1YKL213C EST2Q06163 884 aa5.55□□□□□ -1.52
DOA1YKL213C TUB2P02557 457 aaKnown RBP5.54□□□□□ -1.52
DOA1YKL213C RRP14P36080 434 aaKnown RBP5.54□□□□□ -1.52
DOA1YKL213C CST26P38226 397 aa5.54□□□□□ -1.52
DOA1YKL213C SLX8P40072 274 aa5.54□□□□□ -1.52
DOA1YKL213C VID28P40547 921 aa5.54□□□□□ -1.52
DOA1YKL213C FAP1P53971 965 aa5.54□□□□□ -1.52
DOA1YKL213C SKG3Q06315 1026 aa5.54□□□□□ -1.52
DOA1YKL213C SRS2P12954 1174 aa5.54□□□□□ -1.52
DOA1YKL213C IXR1P33417 597 aa5.54□□□□□ -1.52
DOA1YKL213C OCT1P35999 772 aa5.54□□□□□ -1.52
DOA1YKL213C ERG7P38604 731 aa5.54□□□□□ -1.52
DOA1YKL213C PTK2P47116 818 aaKnown RBP5.54□□□□□ -1.52
DOA1YKL213C ECM23Q02710 187 aa5.54□□□□□ -1.52
DOA1YKL213C TFC6Q06339 672 aa5.54□□□□□ -1.52
DOA1YKL213C YLL054CQ12244 843 aa5.54□□□□□ -1.52
DOA1YKL213C YDJ1P25491 409 aaKnown RBP5.53□□□□□ -1.52
DOA1YKL213C FBP26P32604 452 aa5.53□□□□□ -1.52
DOA1YKL213C LTV1P34078 463 aa5.53□□□□□ -1.52
DOA1YKL213C LEM3P42838 414 aa5.53□□□□□ -1.52
DOA1YKL213C NET1P47035 1189 aa5.53□□□□□ -1.52
DOA1YKL213C YGL081WP53156 320 aa5.53□□□□□ -1.52
DOA1YKL213C ARP5P53946 755 aa5.53□□□□□ -1.52
DOA1YKL213C CEF1Q03654 590 aaPredicted RBP5.53□□□□□ -1.52
DOA1YKL213C YLR257WQ06146 321 aaKnown RBP5.53□□□□□ -1.52
DOA1YKL213C LAP2Q10740 671 aa5.53□□□□□ -1.52
DOA1YKL213C MATALPHA2P0CY08 210 aa5.53□□□□□ -1.52
DOA1YKL213C HMLALPHA2P0CY09 210 aa5.53□□□□□ -1.52
DOA1YKL213C PCT1P13259 424 aa5.53□□□□□ -1.52
DOA1YKL213C MAK31P23059 88 aa5.53□□□□□ -1.52
DOA1YKL213C RAD51P25454 400 aa5.53□□□□□ -1.52
DOA1YKL213C CHS3P29465 1165 aa5.53□□□□□ -1.52
DOA1YKL213C TAF1P46677 1066 aa5.53□□□□□ -1.52
DOA1YKL213C TSR3Q12094 313 aaKnown RBP5.53□□□□□ -1.52
DOA1YKL213C CLF1Q12309 687 aaPredicted RBP5.53□□□□□ -1.52
DOA1YKL213C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
DOA1YKL213C CLC1P17891 233 aa5.52□□□□□ -1.53
DOA1YKL213C MFT1P33441 392 aaKnown RBP5.52□□□□□ -1.53
DOA1YKL213C MPE1P35728 441 aaKnown RBP5.52□□□□□ -1.53
DOA1YKL213C MCD4P36051 919 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms