RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A OXR1Q08952 273 aa5.55□□□□□ -1.52
SFT1YKL006C-A YOR223WQ12015 292 aa5.55□□□□□ -1.52
SFT1YKL006C-A VPS35P34110 944 aa5.54□□□□□ -1.52
SFT1YKL006C-A SAP155P43612 1002 aa5.54□□□□□ -1.52
SFT1YKL006C-A GCV1P48015 400 aa5.54□□□□□ -1.52
SFT1YKL006C-A YGR130CP53278 816 aa5.54□□□□□ -1.52
SFT1YKL006C-A YIG1Q08956 461 aa5.54□□□□□ -1.52
SFT1YKL006C-A YLR122CQ12312 125 aa5.54□□□□□ -1.52
SFT1YKL006C-A PHO4P07270 312 aaKnown RBP5.53□□□□□ -1.52
SFT1YKL006C-A MET4P32389 672 aa5.53□□□□□ -1.52
SFT1YKL006C-A OMA1P36163 345 aa5.53□□□□□ -1.52
SFT1YKL006C-A REI1P38344 393 aaPredicted RBP5.53□□□□□ -1.52
SFT1YKL006C-A MEC3Q02574 474 aa5.53□□□□□ -1.52
SFT1YKL006C-A DOT1Q04089 582 aaKnown RBP5.53□□□□□ -1.52
SFT1YKL006C-A MED7Q08278 222 aa5.53□□□□□ -1.52
SFT1YKL006C-A ALG6Q12001 544 aaKnown RBP5.53□□□□□ -1.52
SFT1YKL006C-A SHU2P38957 223 aa5.52□□□□□ -1.53
SFT1YKL006C-A NRD1P53617 575 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53 RIP-Chip
SFT1YKL006C-A DAL4Q04895 635 aa5.52□□□□□ -1.53
SFT1YKL006C-A WHI5Q12416 295 aa5.52□□□□□ -1.53
SFT1YKL006C-A TRP3P00937 484 aa5.51□□□□□ -1.53
SFT1YKL006C-A KAR2P16474 682 aaKnown RBP5.51□□□□□ -1.53
SFT1YKL006C-A GPT2P36148 743 aa5.51□□□□□ -1.53
SFT1YKL006C-A DAK2P43550 591 aa5.51□□□□□ -1.53
SFT1YKL006C-A PRP40P33203 583 aaKnown RBP5.5□□□□□ -1.53
SFT1YKL006C-A PEX13P80667 386 aa5.5□□□□□ -1.53
SFT1YKL006C-A YML020WQ03722 664 aa5.5□□□□□ -1.53
SFT1YKL006C-A AVO1Q08236 1176 aa5.5□□□□□ -1.53
SFT1YKL006C-A CYC7P00045 113 aa5.49□□□□□ -1.53
SFT1YKL006C-A RPT1P33299 467 aaKnown RBP5.49□□□□□ -1.53
SFT1YKL006C-A RSM26P47141 266 aa5.49□□□□□ -1.53
SFT1YKL006C-A MSB1P21339 1137 aaKnown RBP5.48□□□□□ -1.53
SFT1YKL006C-A SQT1P35184 431 aa5.48□□□□□ -1.53
SFT1YKL006C-A ATG14P38270 344 aa5.48□□□□□ -1.53
SFT1YKL006C-A SPO74P45819 413 aa5.48□□□□□ -1.53
SFT1YKL006C-A SEN54Q02825 467 aaPredicted RBP5.48□□□□□ -1.53
SFT1YKL006C-A UGA4P32837 571 aa5.47□□□□□ -1.53
SFT1YKL006C-A LIP5P32875 414 aa5.47□□□□□ -1.53
SFT1YKL006C-A TOS1P38288 455 aa5.47□□□□□ -1.53
SFT1YKL006C-A MMM1P41800 426 aa5.47□□□□□ -1.53
SFT1YKL006C-A ELA1P53861 379 aaPredicted RBP5.47□□□□□ -1.53
SFT1YKL006C-A ULP1Q02724 621 aa5.47□□□□□ -1.53
SFT1YKL006C-A TY1A-LR4P0C2I8 440 aaKnown RBP5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-DR6P0CX70 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-ER1P0CX71 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-LR2P0CX72 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-PLP0CX73 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-JR1P0CX74 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-LR3P0CX75 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-ML2P0CX76 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A MSH3P25336 1018 aa5.46□□□□□ -1.54
SFT1YKL006C-A WHI3P34761 661 aaKnown RBP5.46□□□□□ -1.54
SFT1YKL006C-A YKR073CP36153 106 aa5.46□□□□□ -1.54
SFT1YKL006C-A ARL1P38116 183 aaKnown RBP5.46□□□□□ -1.54
SFT1YKL006C-A EXO5P38289 585 aa5.46□□□□□ -1.54
SFT1YKL006C-A SLS1P42900 643 aa5.46□□□□□ -1.54
SFT1YKL006C-A MTR4P47047 1073 aaKnown RBP5.46□□□□□ -1.54
SFT1YKL006C-A INP52P50942 1183 aa5.46□□□□□ -1.54
SFT1YKL006C-A YGR045CP53229 120 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-GR1Q12085 440 aa5.46□□□□□ -1.54
SFT1YKL006C-A NSI1Q12457 570 aa5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-PR3Q6Q5H1 440 aaKnown RBP5.46□□□□□ -1.54
SFT1YKL006C-A TY1A-OLQ92392 440 aaKnown RBP5.46□□□□□ -1.54
SFT1YKL006C-A RPS4AP0CX35 261 aaKnown RBP5.45□□□□□ -1.54
SFT1YKL006C-A RPS4BP0CX36 261 aaKnown RBP5.45□□□□□ -1.54
SFT1YKL006C-A MGE1P38523 228 aa5.45□□□□□ -1.54
SFT1YKL006C-A MSH4P40965 878 aaPredicted RBP5.45□□□□□ -1.54
SFT1YKL006C-A NOG1Q02892 647 aaKnown RBP5.45□□□□□ -1.54
SFT1YKL006C-A CIT3P43635 486 aa5.44□□□□□ -1.54
SFT1YKL006C-A POL32P47110 350 aa5.44□□□□□ -1.54
SFT1YKL006C-A RCM1P53972 490 aa5.44□□□□□ -1.54
SFT1YKL006C-A TOS4Q06266 489 aa5.44□□□□□ -1.54
SFT1YKL006C-A NFS1P25374 497 aa5.43□□□□□ -1.54
SFT1YKL006C-A HEM3P28789 327 aa5.43□□□□□ -1.54
SFT1YKL006C-A PEX28P38848 579 aa5.43□□□□□ -1.54
SFT1YKL006C-A YNR063WP53749 607 aa5.43□□□□□ -1.54
SFT1YKL006C-A ADI1Q03677 179 aa5.43□□□□□ -1.54
SFT1YKL006C-A YOR059CQ08448 450 aaKnown RBP5.43□□□□□ -1.54
SFT1YKL006C-A PUB1P32588 453 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SFT1YKL006C-A NNK1P36003 928 aa5.42□□□□□ -1.54
SFT1YKL006C-A NEM1P38757 446 aa5.42□□□□□ -1.54
SFT1YKL006C-A BRE4Q07660 1125 aa5.42□□□□□ -1.54
SFT1YKL006C-A LAP2Q10740 671 aa5.42□□□□□ -1.54
SFT1YKL006C-A VMA4P22203 233 aaKnown RBP5.41□□□□□ -1.54
SFT1YKL006C-A SMY2P32909 740 aaKnown RBP5.41□□□□□ -1.54
SFT1YKL006C-A FAA3P39002 694 aa5.41□□□□□ -1.54
SFT1YKL006C-A YAR028WP39548 234 aa5.41□□□□□ -1.54
SFT1YKL006C-A MRPS18P42847 217 aa5.41□□□□□ -1.54
SFT1YKL006C-A UTP5Q04177 643 aaKnown RBP5.41□□□□□ -1.54
SFT1YKL006C-A HXK1P04806 485 aaKnown RBP5.4□□□□□ -1.54
SFT1YKL006C-A PRE9P23638 258 aaKnown RBP5.4□□□□□ -1.54
SFT1YKL006C-A HSE1P38753 452 aa5.4□□□□□ -1.54
SFT1YKL006C-A XKS1P42826 600 aa5.4□□□□□ -1.54
SFT1YKL006C-A SDH1Q00711 640 aa5.4□□□□□ -1.54
SFT1YKL006C-A YPL109CQ02981 657 aa5.4□□□□□ -1.54
SFT1YKL006C-A GCD1P09032 578 aaPredicted RBP5.39□□□□□ -1.55
SFT1YKL006C-A ALT1P52893 592 aa5.39□□□□□ -1.55
SFT1YKL006C-A EAR1Q03212 550 aa5.39□□□□□ -1.55
SFT1YKL006C-A NOP8Q08287 484 aaPredicted RBP5.39□□□□□ -1.55
SFT1YKL006C-A ATE1P16639 503 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms