RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A MED7Q08278 222 aa5.6□□□□□ -1.51
YGR109W-AYGR109W-A YLL054CQ12244 843 aa5.6□□□□□ -1.51
YGR109W-AYGR109W-A GLT1Q12680 2145 aaKnown RBP5.59□□□□□ -1.51
YGR109W-AYGR109W-A YKR073CP36153 106 aa5.59□□□□□ -1.51
YGR109W-AYGR109W-A INP52P50942 1183 aa5.59□□□□□ -1.51
YGR109W-AYGR109W-A MEC3Q02574 474 aa5.59□□□□□ -1.51
YGR109W-AYGR109W-A WHI5Q12416 295 aa5.59□□□□□ -1.51
YGR109W-AYGR109W-A VPS35P34110 944 aa5.58□□□□□ -1.52
YGR109W-AYGR109W-A GPT2P36148 743 aa5.58□□□□□ -1.52
YGR109W-AYGR109W-A DOT1Q04089 582 aaKnown RBP5.58□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-LR4P0C2I8 440 aaKnown RBP5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-DR6P0CX70 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-ER1P0CX71 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-LR2P0CX72 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-PLP0CX73 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-JR1P0CX74 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-LR3P0CX75 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-ML2P0CX76 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A GCD6P32501 712 aaKnown RBP5.57□□□□□ -1.52
YGR109W-AYGR109W-A THI12P42883 340 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A THI5P43534 340 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A THI11P47183 340 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A THI13Q07748 340 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A ALG6Q12001 544 aaKnown RBP5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-GR1Q12085 440 aa5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-PR3Q6Q5H1 440 aaKnown RBP5.57□□□□□ -1.52
YGR109W-AYGR109W-A TY1A-OLQ92392 440 aaKnown RBP5.57□□□□□ -1.52
YGR109W-AYGR109W-A SEC20P28791 383 aa5.56□□□□□ -1.52
YGR109W-AYGR109W-A TOS1P38288 455 aa5.56□□□□□ -1.52
YGR109W-AYGR109W-A REI1P38344 393 aaPredicted RBP5.56□□□□□ -1.52
YGR109W-AYGR109W-A IPL1P38991 367 aa5.56□□□□□ -1.52
YGR109W-AYGR109W-A SPO74P45819 413 aa5.56□□□□□ -1.52
YGR109W-AYGR109W-A SEN54Q02825 467 aaPredicted RBP5.56□□□□□ -1.52
YGR109W-AYGR109W-A CYC7P00045 113 aa5.55□□□□□ -1.52
YGR109W-AYGR109W-A MSB1P21339 1137 aaKnown RBP5.55□□□□□ -1.52
YGR109W-AYGR109W-A PRP40P33203 583 aaKnown RBP5.55□□□□□ -1.52
YGR109W-AYGR109W-A DAK2P43550 591 aa5.55□□□□□ -1.52
YGR109W-AYGR109W-A UGA4P32837 571 aa5.54□□□□□ -1.52
YGR109W-AYGR109W-A YKL077WP36081 392 aa5.54□□□□□ -1.52
YGR109W-AYGR109W-A EXO5P38289 585 aa5.54□□□□□ -1.52
YGR109W-AYGR109W-A DAL4Q04895 635 aa5.54□□□□□ -1.52
YGR109W-AYGR109W-A TOS4Q06266 489 aa5.54□□□□□ -1.52
YGR109W-AYGR109W-A ARL1P38116 183 aaKnown RBP5.53□□□□□ -1.52
YGR109W-AYGR109W-A SHU2P38957 223 aa5.53□□□□□ -1.52
YGR109W-AYGR109W-A MMM1P41800 426 aa5.53□□□□□ -1.52
YGR109W-AYGR109W-A SLS1P42900 643 aa5.53□□□□□ -1.52
YGR109W-AYGR109W-A CTH1P47976 325 aa5.53□□□□□ -1.52
YGR109W-AYGR109W-A NOG1Q02892 647 aaKnown RBP5.53□□□□□ -1.52
YGR109W-AYGR109W-A PUB1P32588 453 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
YGR109W-AYGR109W-A LIP5P32875 414 aa5.52□□□□□ -1.53
YGR109W-AYGR109W-A WHI3P34761 661 aaKnown RBP5.52□□□□□ -1.53
YGR109W-AYGR109W-A YGR045CP53229 120 aa5.52□□□□□ -1.53
YGR109W-AYGR109W-A ULP1Q02724 621 aa5.52□□□□□ -1.53
YGR109W-AYGR109W-A OXR1Q08952 273 aa5.52□□□□□ -1.53
YGR109W-AYGR109W-A KAR2P16474 682 aaKnown RBP5.51□□□□□ -1.53
YGR109W-AYGR109W-A NEM1P38757 446 aa5.51□□□□□ -1.53
YGR109W-AYGR109W-A MSH4P40965 878 aaPredicted RBP5.51□□□□□ -1.53
YGR109W-AYGR109W-A ELA1P53861 379 aaPredicted RBP5.51□□□□□ -1.53
YGR109W-AYGR109W-A BRE4Q07660 1125 aa5.51□□□□□ -1.53
YGR109W-AYGR109W-A RPS4AP0CX35 261 aaKnown RBP5.5□□□□□ -1.53
YGR109W-AYGR109W-A RPS4BP0CX36 261 aaKnown RBP5.5□□□□□ -1.53
YGR109W-AYGR109W-A MSH3P25336 1018 aa5.5□□□□□ -1.53
YGR109W-AYGR109W-A RPT1P33299 467 aaKnown RBP5.5□□□□□ -1.53
YGR109W-AYGR109W-A SLD2P34252 453 aa5.5□□□□□ -1.53
YGR109W-AYGR109W-A CIT3P43635 486 aa5.5□□□□□ -1.53
YGR109W-AYGR109W-A PEX13P80667 386 aa5.5□□□□□ -1.53
YGR109W-AYGR109W-A MAG2Q06436 670 aaKnown RBP5.5□□□□□ -1.53
YGR109W-AYGR109W-A AVO1Q08236 1176 aa5.5□□□□□ -1.53
YGR109W-AYGR109W-A GCD1P09032 578 aaPredicted RBP5.49□□□□□ -1.53
YGR109W-AYGR109W-A RSM26P47141 266 aa5.49□□□□□ -1.53
YGR109W-AYGR109W-A YML020WQ03722 664 aa5.49□□□□□ -1.53
YGR109W-AYGR109W-A NFS1P25374 497 aa5.48□□□□□ -1.53
YGR109W-AYGR109W-A FAA3P39002 694 aa5.48□□□□□ -1.53
YGR109W-AYGR109W-A MTR4P47047 1073 aaKnown RBP5.48□□□□□ -1.53
YGR109W-AYGR109W-A ALT1P52893 592 aa5.48□□□□□ -1.53
YGR109W-AYGR109W-A RCM1P53972 490 aa5.48□□□□□ -1.53
YGR109W-AYGR109W-A SDH1Q00711 640 aa5.48□□□□□ -1.53
YGR109W-AYGR109W-A EAR1Q03212 550 aa5.48□□□□□ -1.53
YGR109W-AYGR109W-A HXK1P04806 485 aaKnown RBP5.47□□□□□ -1.53
YGR109W-AYGR109W-A SMY2P32909 740 aaKnown RBP5.47□□□□□ -1.53
YGR109W-AYGR109W-A SQT1P35184 431 aa5.47□□□□□ -1.53
YGR109W-AYGR109W-A SEA4P38164 1038 aa5.47□□□□□ -1.53
YGR109W-AYGR109W-A PEX28P38848 579 aa5.47□□□□□ -1.53
YGR109W-AYGR109W-A YPL109CQ02981 657 aa5.47□□□□□ -1.53
YGR109W-AYGR109W-A ADI1Q03677 179 aa5.47□□□□□ -1.53
YGR109W-AYGR109W-A UTP5Q04177 643 aaKnown RBP5.47□□□□□ -1.53
YGR109W-AYGR109W-A YOR059CQ08448 450 aaKnown RBP5.47□□□□□ -1.53
YGR109W-AYGR109W-A NNK1P36003 928 aa5.46□□□□□ -1.54
YGR109W-AYGR109W-A VMA4P22203 233 aaKnown RBP5.45□□□□□ -1.54
YGR109W-AYGR109W-A YAR028WP39548 234 aa5.45□□□□□ -1.54
YGR109W-AYGR109W-A OYE3P41816 400 aaPredicted RBP5.45□□□□□ -1.54
YGR109W-AYGR109W-A XKS1P42826 600 aa5.45□□□□□ -1.54
YGR109W-AYGR109W-A NOP8Q08287 484 aaPredicted RBP5.45□□□□□ -1.54
YGR109W-AYGR109W-A NSI1Q12457 570 aa5.45□□□□□ -1.54
YGR109W-AYGR109W-A YGL140CP53120 1219 aa5.44□□□□□ -1.54
YGR109W-AYGR109W-A HEM13P11353 328 aaKnown RBP5.43□□□□□ -1.54
YGR109W-AYGR109W-A RDH54P38086 958 aa5.43□□□□□ -1.54
YGR109W-AYGR109W-A PIC2P40035 300 aa5.43□□□□□ -1.54
YGR109W-AYGR109W-A POL32P47110 350 aa5.43□□□□□ -1.54
YGR109W-AYGR109W-A YVC1Q12324 675 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms