RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C MSH4P40965 878 aaPredicted RBP7.32□□□□□ -1.24
YPT1YFL038C ALD2P47771 506 aa7.32□□□□□ -1.24
YPT1YFL038C MYO5Q04439 1219 aaKnown RBP7.32□□□□□ -1.24
YPT1YFL038C HCR1Q05775 265 aaKnown RBP7.32□□□□□ -1.24
YPT1YFL038C MRD1Q06106 887 aaKnown RBP7.32□□□□□ -1.24
YPT1YFL038C MMR1Q06324 491 aa7.32□□□□□ -1.24
YPT1YFL038C RIX7Q07844 837 aaKnown RBP7.32□□□□□ -1.24
YPT1YFL038C SFI1Q12369 946 aa7.32□□□□□ -1.24
YPT1YFL038C SNF3P10870 884 aa7.31□□□□□ -1.24
YPT1YFL038C PHO13P19881 312 aa7.31□□□□□ -1.24
YPT1YFL038C MRPL32P25348 183 aa7.31□□□□□ -1.24
YPT1YFL038C RPT3P33298 428 aaKnown RBP7.31□□□□□ -1.24
YPT1YFL038C YHL050CP38721 697 aa7.31□□□□□ -1.24
YPT1YFL038C STR2P47164 639 aa7.31□□□□□ -1.24
YPT1YFL038C VPS60Q03390 229 aa7.31□□□□□ -1.24
YPT1YFL038C SAS4Q04003 481 aa7.31□□□□□ -1.24
YPT1YFL038C GFD1Q04839 188 aaKnown RBP7.31□□□□□ -1.24
YPT1YFL038C TOS4Q06266 489 aa7.31□□□□□ -1.24
YPT1YFL038C CSC1Q06538 782 aa7.31□□□□□ -1.24
YPT1YFL038C YCG1Q06680 1035 aa7.31□□□□□ -1.24
YPT1YFL038C IRC3Q06683 689 aa7.31□□□□□ -1.24
YPT1YFL038C TMA16Q08687 178 aa7.31□□□□□ -1.24
YPT1YFL038C PTC5Q12511 572 aa7.31□□□□□ -1.24
YPT1YFL038C NBL1Q3E7Y6 73 aa7.31□□□□□ -1.24
YPT1YFL038C YOR111WQ99210 232 aa7.31□□□□□ -1.24
YPT1YFL038C RAD61Q99359 647 aa7.31□□□□□ -1.24
YPT1YFL038C LTV1P34078 463 aa7.3□□□□□ -1.24
YPT1YFL038C SAP190P36123 1033 aa7.3□□□□□ -1.24
YPT1YFL038C JJJ2P46997 583 aa7.3□□□□□ -1.24
YPT1YFL038C PIP2P52960 996 aa7.3□□□□□ -1.24
YPT1YFL038C NAF1P53919 492 aaKnown RBP7.3□□□□□ -1.24
YPT1YFL038C HPC2Q01448 625 aa7.3□□□□□ -1.24
YPT1YFL038C COG4Q06096 861 aa7.3□□□□□ -1.24
YPT1YFL038C ALG1P16661 449 aa7.29□□□□□ -1.24
YPT1YFL038C RIT1P23796 513 aa7.29□□□□□ -1.24
YPT1YFL038C SAC6P32599 642 aaKnown RBP7.29□□□□□ -1.24
YPT1YFL038C MDL2P33311 773 aa7.29□□□□□ -1.24
YPT1YFL038C PFF1P38244 976 aa7.29□□□□□ -1.24
YPT1YFL038C BCD1P38772 366 aa7.29□□□□□ -1.24
YPT1YFL038C CSM2P40465 213 aa7.29□□□□□ -1.24
YPT1YFL038C DAK2P43550 591 aa7.29□□□□□ -1.24
YPT1YFL038C YGL138CP53122 345 aa7.29□□□□□ -1.24
YPT1YFL038C RTC4P53850 401 aa7.29□□□□□ -1.24
YPT1YFL038C EIS1Q05050 843 aaKnown RBP7.29□□□□□ -1.24
YPT1YFL038C YOR296WQ08748 1289 aa7.29□□□□□ -1.24
YPT1YFL038C YPL260WQ08977 551 aa7.29□□□□□ -1.24
YPT1YFL038C WRS1Q12109 432 aaKnown RBP7.29□□□□□ -1.24
YPT1YFL038C TIP41Q12199 356 aa7.29□□□□□ -1.24
YPT1YFL038C MET6P05694 767 aaKnown RBP7.28□□□□□ -1.24
YPT1YFL038C PDC1P06169 563 aaKnown RBP7.28□□□□□ -1.24
YPT1YFL038C CAF20P12962 161 aaKnown RBP7.28□□□□□ -1.24
YPT1YFL038C BUD31P25337 157 aaPredicted RBP7.28□□□□□ -1.24
YPT1YFL038C CDC15P27636 974 aa7.28□□□□□ -1.24
YPT1YFL038C HIR1P32479 840 aa7.28□□□□□ -1.24
YPT1YFL038C VID27P40157 782 aa7.28□□□□□ -1.24
YPT1YFL038C ALF1P53904 254 aa7.28□□□□□ -1.24
YPT1YFL038C RPT6Q01939 405 aaKnown RBP7.28□□□□□ -1.24
YPT1YFL038C YDR341CQ05506 607 aaKnown RBP7.28□□□□□ -1.24
YPT1YFL038C AFT2Q08957 416 aa7.28□□□□□ -1.24
YPT1YFL038C APL4Q12028 832 aa7.28□□□□□ -1.24
YPT1YFL038C HIS4P00815 799 aaKnown RBP7.27□□□□□ -1.25
YPT1YFL038C STE11P23561 717 aa7.27□□□□□ -1.25
YPT1YFL038C MRC1P25588 1096 aa7.27□□□□□ -1.25
YPT1YFL038C PCH2P38126 564 aa7.27□□□□□ -1.25
YPT1YFL038C TOM71P38825 639 aaKnown RBP7.27□□□□□ -1.25
YPT1YFL038C GTT3P39996 337 aa7.27□□□□□ -1.25
YPT1YFL038C MGA2P40578 1113 aa7.27□□□□□ -1.25
YPT1YFL038C LYS14P40971 790 aa7.27□□□□□ -1.25
YPT1YFL038C ERO1Q03103 563 aa7.27□□□□□ -1.25
YPT1YFL038C CLF1Q12309 687 aaPredicted RBP7.27□□□□□ -1.25
YPT1YFL038C MSH3P25336 1018 aa7.26□□□□□ -1.25
YPT1YFL038C PRO3P32263 286 aaKnown RBP7.26□□□□□ -1.25
YPT1YFL038C CIN4P39110 191 aa7.26□□□□□ -1.25
YPT1YFL038C APL6P46682 809 aa7.26□□□□□ -1.25
YPT1YFL038C YGR237CP50089 785 aa7.26□□□□□ -1.25
YPT1YFL038C RET3P53600 189 aa7.26□□□□□ -1.25
YPT1YFL038C FOB1O13329 566 aa7.25□□□□□ -1.25
YPT1YFL038C QCR6P00127 147 aa7.25□□□□□ -1.25
YPT1YFL038C GLN1P32288 370 aaKnown RBP7.25□□□□□ -1.25
YPT1YFL038C YET1P35723 206 aa7.25□□□□□ -1.25
YPT1YFL038C EFM2P38347 419 aa7.25□□□□□ -1.25
YPT1YFL038C CTM1P38818 585 aa7.25□□□□□ -1.25
YPT1YFL038C CCC2P38995 1004 aa7.25□□□□□ -1.25
YPT1YFL038C THI6P41835 540 aa7.25□□□□□ -1.25
YPT1YFL038C NSG2P53898 299 aa7.25□□□□□ -1.25
YPT1YFL038C VPS38Q05919 439 aa7.25□□□□□ -1.25
YPT1YFL038C DSE3Q08729 430 aa7.25□□□□□ -1.25
YPT1YFL038C FLO1P32768 1537 aa7.25□□□□□ -1.25
YPT1YFL038C PMD1P32634 1753 aa7.25□□□□□ -1.25
YPT1YFL038C CDC37P06101 506 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C ARG82P07250 355 aa7.24□□□□□ -1.25
YPT1YFL038C STI1P15705 589 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
YPT1YFL038C THR4P16120 514 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C PET123P17558 318 aa7.24□□□□□ -1.25
YPT1YFL038C RET1P22276 1149 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C SPO11P23179 398 aa7.24□□□□□ -1.25
YPT1YFL038C RPL8BP29453 256 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C STT3P39007 718 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C CCT3P39077 534 aaKnown RBP7.24□□□□□ -1.25
YPT1YFL038C CAJ1P39101 391 aa7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms