RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C NAB2P32505 525 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
RPB7YDR404C MCX1P38323 520 aaPredicted RBP6.48□□□□□ -1.37
RPB7YDR404C ITC1P53125 1264 aa6.48□□□□□ -1.37
RPB7YDR404C RSC2Q06488 889 aa6.48□□□□□ -1.37
RPB7YDR404C MCM2P29469 868 aa6.47□□□□□ -1.37
RPB7YDR404C RPT1P33299 467 aaKnown RBP6.47□□□□□ -1.37
RPB7YDR404C PGM2P37012 569 aaKnown RBP6.47□□□□□ -1.37
RPB7YDR404C HXT8P40886 569 aa6.47□□□□□ -1.37
RPB7YDR404C NUP170P38181 1502 aa6.46□□□□□ -1.37
RPB7YDR404C IDI1P15496 288 aa6.46□□□□□ -1.38
RPB7YDR404C MSN1P22148 382 aa6.46□□□□□ -1.38
RPB7YDR404C OCA5P38738 679 aa6.46□□□□□ -1.38
RPB7YDR404C YER156CP40093 338 aaKnown RBP6.46□□□□□ -1.38
RPB7YDR404C DAK2P43550 591 aa6.46□□□□□ -1.38
RPB7YDR404C YNL011CP53980 444 aa6.45□□□□□ -1.38
RPB7YDR404C SPR28Q04921 423 aa6.45□□□□□ -1.38
RPB7YDR404C MAG2Q06436 670 aaKnown RBP6.45□□□□□ -1.38
RPB7YDR404C YTA7P40340 1379 aa6.44□□□□□ -1.38
RPB7YDR404C CDC55Q00362 526 aa6.44□□□□□ -1.38
RPB7YDR404C GIS4Q04233 774 aa6.44□□□□□ -1.38
RPB7YDR404C SPO14P36126 1683 aa6.44□□□□□ -1.38
RPB7YDR404C NAR1P23503 491 aaKnown RBP6.43□□□□□ -1.38
RPB7YDR404C GCD6P32501 712 aaKnown RBP6.43□□□□□ -1.38
RPB7YDR404C SMC1P32908 1225 aa6.43□□□□□ -1.38
RPB7YDR404C VPS35P34110 944 aa6.43□□□□□ -1.38
RPB7YDR404C SKN7P38889 622 aa6.43□□□□□ -1.38
RPB7YDR404C TAT1P38085 619 aa6.42□□□□□ -1.38
RPB7YDR404C AIM46P38885 310 aa6.42□□□□□ -1.38
RPB7YDR404C YIL165CP40446 119 aa6.42□□□□□ -1.38
RPB7YDR404C YJL181WP46987 611 aa6.42□□□□□ -1.38
RPB7YDR404C NNF1P47149 201 aa6.42□□□□□ -1.38
RPB7YDR404C SAM37P50110 327 aa6.42□□□□□ -1.38
RPB7YDR404C PPT1P53043 513 aa6.42□□□□□ -1.38
RPB7YDR404C YDR215CQ12240 137 aa6.42□□□□□ -1.38
RPB7YDR404C SPP41P38904 1435 aa6.42□□□□□ -1.38
RPB7YDR404C RAD55P38953 406 aa6.41□□□□□ -1.38
RPB7YDR404C CCT8P47079 568 aaKnown RBP6.41□□□□□ -1.38
RPB7YDR404C RSC4Q02206 625 aa6.41□□□□□ -1.38
RPB7YDR404C NAP1P25293 417 aaKnown RBP6.4□□□□□ -1.38
RPB7YDR404C RPS26AP39938 119 aaKnown RBP6.4□□□□□ -1.38
RPB7YDR404C RPS26BP39939 119 aaKnown RBP6.4□□□□□ -1.38
RPB7YDR404C VTH1P40438 1549 aa6.4□□□□□ -1.39
RPB7YDR404C VTH2P40890 1549 aa6.4□□□□□ -1.39
RPB7YDR404C MRP10O75012 95 aa6.39□□□□□ -1.39
RPB7YDR404C PEP7P32609 515 aa6.39□□□□□ -1.39
RPB7YDR404C SLN1P39928 1220 aaPredicted RBP6.39□□□□□ -1.39
RPB7YDR404C RMD1Q03441 430 aa6.39□□□□□ -1.39
RPB7YDR404C TOS4Q06266 489 aa6.39□□□□□ -1.39
RPB7YDR404C NOC3Q07896 663 aaPredicted RBP6.39□□□□□ -1.39
RPB7YDR404C SLP1Q12232 587 aa6.39□□□□□ -1.39
RPB7YDR404C YCK2P23292 546 aaKnown RBP6.38□□□□□ -1.39
RPB7YDR404C CIC1P38779 376 aaKnown RBP6.38□□□□□ -1.39
RPB7YDR404C NTA1P40354 457 aa6.38□□□□□ -1.39
RPB7YDR404C RGD2P43556 714 aa6.38□□□□□ -1.39
RPB7YDR404C PRY1P47032 299 aa6.38□□□□□ -1.39
RPB7YDR404C BSC2Q05611 235 aa6.38□□□□□ -1.39
RPB7YDR404C EMG1Q06287 252 aaKnown RBP6.38□□□□□ -1.39
RPB7YDR404C OXR1Q08952 273 aa6.38□□□□□ -1.39
RPB7YDR404C ULS1Q08562 1619 aa6.37□□□□□ -1.39
RPB7YDR404C TSC11P40061 1430 aa6.37□□□□□ -1.39
RPB7YDR404C SBP1P10080 294 aaKnown RBP6.37□□□□□ -1.39
RPB7YDR404C RRM3P38766 723 aa6.37□□□□□ -1.39
RPB7YDR404C YGR122WP53272 402 aa6.37□□□□□ -1.39
RPB7YDR404C ALD6P54115 500 aaKnown RBP6.37□□□□□ -1.39
RPB7YDR404C CYC8P14922 966 aa6.36□□□□□ -1.39
RPB7YDR404C VAC8P39968 578 aa6.36□□□□□ -1.39
RPB7YDR404C MAD1P40957 749 aa6.36□□□□□ -1.39
RPB7YDR404C ALD3P54114 506 aa6.36□□□□□ -1.39
RPB7YDR404C VPS16Q03308 798 aa6.36□□□□□ -1.39
RPB7YDR404C PIN2Q12057 282 aa6.36□□□□□ -1.39
RPB7YDR404C TIF6Q12522 245 aaKnown RBP6.36□□□□□ -1.39
RPB7YDR404C IRS4P36115 615 aaKnown RBP6.35□□□□□ -1.39
RPB7YDR404C PSY2P40164 858 aa6.35□□□□□ -1.39
RPB7YDR404C SOK2P53438 785 aaPredicted RBP6.35□□□□□ -1.39
RPB7YDR404C ESF1Q06344 628 aaKnown RBP6.35□□□□□ -1.39
RPB7YDR404C MCA1Q08601 432 aa6.35□□□□□ -1.39
RPB7YDR404C HXK1P04806 485 aaKnown RBP6.34□□□□□ -1.39
RPB7YDR404C RAD2P07276 1031 aa6.34□□□□□ -1.39
RPB7YDR404C CLN2P20438 545 aa6.34□□□□□ -1.39
RPB7YDR404C FAA3P39002 694 aa6.34□□□□□ -1.39
RPB7YDR404C GIP2P40036 548 aa6.34□□□□□ -1.39
RPB7YDR404C TED1P40533 473 aa6.34□□□□□ -1.39
RPB7YDR404C INP51P40559 946 aaKnown RBP6.34□□□□□ -1.39
RPB7YDR404C BUD9P53226 547 aa6.34□□□□□ -1.39
RPB7YDR404C INP54Q08227 384 aaKnown RBP6.34□□□□□ -1.39
RPB7YDR404C FUS1P11710 512 aa6.33□□□□□ -1.4
RPB7YDR404C SMC4Q12267 1418 aa6.33□□□□□ -1.4
RPB7YDR404C LSB6P42951 607 aa6.32□□□□□ -1.4
RPB7YDR404C DAL4Q04895 635 aa6.32□□□□□ -1.4
RPB7YDR404C FPR4Q06205 392 aaPredicted RBP6.32□□□□□ -1.4
RPB7YDR404C YOL098CQ12496 1037 aa6.32□□□□□ -1.4
RPB7YDR404C POL1P13382 1468 aa6.32□□□□□ -1.4
RPB7YDR404C YOR1P53049 1477 aa6.32□□□□□ -1.4
RPB7YDR404C SNT2P53127 1403 aa6.32□□□□□ -1.4
RPB7YDR404C FLP1P03870 423 aa6.31□□□□□ -1.4
RPB7YDR404C PET112P33893 541 aa6.31□□□□□ -1.4
RPB7YDR404C YHL008CP38750 627 aa6.31□□□□□ -1.4
RPB7YDR404C YCS4Q06156 1176 aa6.31□□□□□ -1.4
RPB7YDR404C GAS5Q08193 484 aa6.31□□□□□ -1.4
RPB7YDR404C AI3P03877 415 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms