RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	ARP5	P53946	755 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	FRA1	Q07825	749 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	CTI6	Q08923	506 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	GIN4	Q12263	1142 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	GUT2	P32191	649 aa		5.67	□□□□□ -1.5
PAL1	YDR348C	SWI3	P32591	825 aa		5.67	□□□□□ -1.5
PAL1	YDR348C	PEP12	P32854	288 aa		5.67	□□□□□ -1.5
PAL1	YDR348C	PRX1	P34227	261 aa	Known RBP	5.67	□□□□□ -1.5
PAL1	YDR348C	TYS1	P36421	394 aa	Known RBP	5.67	□□□□□ -1.5
PAL1	YDR348C	DSD1	P53095	428 aa		5.67	□□□□□ -1.5
PAL1	YDR348C	SRT1	Q03175	343 aa		5.67	□□□□□ -1.5
PAL1	YDR348C	VPS72	Q03388	795 aa		5.67	□□□□□ -1.5
PAL1	YDR348C	RPL19A	P0CX82	189 aa	Known RBP	5.66	□□□□□ -1.5
PAL1	YDR348C	RPL19B	P0CX83	189 aa	Predicted RBP	5.66	□□□□□ -1.5
PAL1	YDR348C	HSP104	P31539	908 aa	Known RBP	5.66	□□□□□ -1.5
PAL1	YDR348C	OSW7	P43611	510 aa		5.66	□□□□□ -1.5
PAL1	YDR348C	ETT1	Q08421	412 aa	Known RBP	5.66	□□□□□ -1.5
PAL1	YDR348C	PUS1	Q12211	544 aa	Known RBP	5.66	□□□□□ -1.5
PAL1	YDR348C	APL6	P46682	809 aa		5.65	□□□□□ -1.5
PAL1	YDR348C	PEX14	P53112	341 aa		5.65	□□□□□ -1.5
PAL1	YDR348C	STE20	Q03497	939 aa	Known RBP	5.65	□□□□□ -1.5
PAL1	YDR348C	NOB1	Q08444	459 aa	Known RBP	5.65	□□□□□ -1.5
PAL1	YDR348C	YPL225W	Q08971	146 aa	Known RBP	5.65	□□□□□ -1.5
PAL1	YDR348C	HSP82	P02829	709 aa	Known RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	RPS19A	P07280	144 aa	Known RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	RPS19B	P07281	144 aa	Predicted RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	PET123	P17558	318 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	SSA4	P22202	642 aa	Known RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	GRX4	P32642	244 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	YBR287W	P38355	427 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	NNF2	P53253	936 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	RRB1	Q04225	511 aa	Known RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	YML083C	Q04526	418 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	SEC39	Q12745	709 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	RPO41	P13433	1351 aa	Known RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	PUP1	P25043	261 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	PPH3	P32345	308 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	SLD2	P34252	453 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	RGD1	P38339	666 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	AIM9	P40053	627 aa	Known RBP	5.64	□□□□□ -1.51
PAL1	YDR348C	FYV10	P40492	516 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	RIA1	P53893	1110 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	RCM1	P53972	490 aa		5.64	□□□□□ -1.51
PAL1	YDR348C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.63	□□□□□ -1.51
PAL1	YDR348C	CTK3	P46963	296 aa	Predicted RBP	5.63	□□□□□ -1.51
PAL1	YDR348C	CTF18	P49956	741 aa		5.63	□□□□□ -1.51
PAL1	YDR348C	TAN1	P53072	289 aa	Predicted RBP	5.63	□□□□□ -1.51
PAL1	YDR348C	CPA2	P03965	1118 aa	Known RBP	5.62	□□□□□ -1.51
PAL1	YDR348C	CDC4	P07834	779 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	GPA1	P08539	472 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	STE11	P23561	717 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	RAD24	P32641	659 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	IXR1	P33417	597 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	TGL4	P36165	910 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	AKL1	P38080	1108 aa	Known RBP	5.62	□□□□□ -1.51
PAL1	YDR348C	SAP1	P39955	897 aa	Known RBP	5.62	□□□□□ -1.51
PAL1	YDR348C	KTR7	P40504	517 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	YGR122W	P53272	402 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	YNL050C	P53952	270 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	HED1	Q03937	162 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	VMS1	Q04311	632 aa	Known RBP	5.62	□□□□□ -1.51
PAL1	YDR348C	MDM38	Q08179	573 aa		5.62	□□□□□ -1.51
PAL1	YDR348C	NOP8	Q08287	484 aa	Predicted RBP	5.62	□□□□□ -1.51
PAL1	YDR348C	DDP1	Q99321	188 aa	Known RBP	5.62	□□□□□ -1.51
PAL1	YDR348C	RAD51	P25454	400 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	KIP2	P28743	706 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	GCD7	P32502	381 aa	Predicted RBP	5.61	□□□□□ -1.51
PAL1	YDR348C	PCH2	P38126	564 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	SOH1	P38633	127 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	YER130C	P39959	443 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	ENT3	P47160	408 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	ZDS1	P50111	915 aa	Known RBP	5.61	□□□□□ -1.51
PAL1	YDR348C	RMD1	Q03441	430 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	WAR1	Q03631	944 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	RBA50	Q04418	439 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	PLP2	Q12017	286 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	APL4	Q12028	832 aa		5.61	□□□□□ -1.51
PAL1	YDR348C	RAD3	P06839	778 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	RDS1	P25611	832 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	SRP40	P32583	406 aa	Predicted RBP	5.6	□□□□□ -1.51
PAL1	YDR348C	AAP1	P37898	856 aa	Known RBP	5.6	□□□□□ -1.51
PAL1	YDR348C	RFC5	P38251	354 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	RRM3	P38766	723 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	HAL5	P38970	855 aa	Known RBP	5.6	□□□□□ -1.51
PAL1	YDR348C	IPL1	P38991	367 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	BRE2	P43132	505 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	YGL242C	P53066	181 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	APP1	P53933	587 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	OMS1	Q06668	471 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	ENV9	Q08651	330 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	APC1	P53886	1748 aa		5.6	□□□□□ -1.51
PAL1	YDR348C	LEU2	P04173	364 aa	Predicted RBP	5.59	□□□□□ -1.51
PAL1	YDR348C	SSA1	P10591	642 aa	Known RBP	5.59	□□□□□ -1.51
PAL1	YDR348C	UBC1	P21734	215 aa	Known RBP	5.59	□□□□□ -1.51
PAL1	YDR348C	CDC15	P27636	974 aa		5.59	□□□□□ -1.51
PAL1	YDR348C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
PAL1	YDR348C	MAM1	P40065	302 aa		5.59	□□□□□ -1.51
PAL1	YDR348C	RIO2	P40160	425 aa	Known RBP	5.59	□□□□□ -1.51
PAL1	YDR348C	APT1	P49435	187 aa	Known RBP	5.59	□□□□□ -1.51
PAL1	YDR348C	VPS30	Q02948	557 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms