RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	YHL008C	P38750	627 aa		4.79	□□□□□ -1.64
SWF1	YDR126W	RCM1	P53972	490 aa		4.79	□□□□□ -1.64
SWF1	YDR126W	PMT7	Q06644	662 aa		4.79	□□□□□ -1.64
SWF1	YDR126W	ARL1	P38116	183 aa	Known RBP	4.78	□□□□□ -1.64
SWF1	YDR126W	POL12	P38121	705 aa	Predicted RBP	4.78	□□□□□ -1.64
SWF1	YDR126W	REI1	P38344	393 aa	Predicted RBP	4.78	□□□□□ -1.64
SWF1	YDR126W	NIT1	P40447	199 aa		4.78	□□□□□ -1.64
SWF1	YDR126W	OYE3	P41816	400 aa	Predicted RBP	4.78	□□□□□ -1.64
SWF1	YDR126W	ALT1	P52893	592 aa		4.78	□□□□□ -1.64
SWF1	YDR126W	DFG16	Q99234	619 aa		4.78	□□□□□ -1.64
SWF1	YDR126W	RPS4A	P0CX35	261 aa	Known RBP	4.77	□□□□□ -1.65
SWF1	YDR126W	RPS4B	P0CX36	261 aa	Known RBP	4.77	□□□□□ -1.65
SWF1	YDR126W	CDC3	P32457	520 aa	Known RBP	4.77	□□□□□ -1.65
SWF1	YDR126W	SEG2	P34250	1132 aa		4.77	□□□□□ -1.65
SWF1	YDR126W	MSH4	P40965	878 aa	Predicted RBP	4.77	□□□□□ -1.65
SWF1	YDR126W	NUT1	P53114	1132 aa		4.77	□□□□□ -1.65
SWF1	YDR126W	YAF9	P53930	226 aa		4.77	□□□□□ -1.65
SWF1	YDR126W	RNQ1	P25367	405 aa		4.76	□□□□□ -1.65
SWF1	YDR126W	UBP5	P39944	805 aa		4.76	□□□□□ -1.65
SWF1	YDR126W	HSP78	P33416	811 aa		4.75	□□□□□ -1.65
SWF1	YDR126W	GRS1	P38088	690 aa	Known RBP	4.75	□□□□□ -1.65
SWF1	YDR126W	ALG6	Q12001	544 aa	Known RBP	4.75	□□□□□ -1.65
SWF1	YDR126W	SMY2	P32909	740 aa	Known RBP	4.74	□□□□□ -1.65
SWF1	YDR126W	ERP5	P38819	212 aa		4.74	□□□□□ -1.65
SWF1	YDR126W	RVS167	P39743	482 aa	Known RBP	4.74	□□□□□ -1.65
SWF1	YDR126W	MDJ2	P42834	146 aa		4.74	□□□□□ -1.65
SWF1	YDR126W	PRP43	P53131	767 aa	Known RBP	4.74	□□□□□ -1.65
SWF1	YDR126W	ORC3	P54790	616 aa		4.74	□□□□□ -1.65
SWF1	YDR126W	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
SWF1	YDR126W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-DR6	P0CX70	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-ER1	P0CX71	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-LR2	P0CX72	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-PL	P0CX73	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-JR1	P0CX74	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-LR3	P0CX75	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-ML2	P0CX76	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	ADP1	P25371	1049 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	NFS1	P25374	497 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	MCM5	P29496	775 aa	Known RBP	4.73	□□□□□ -1.65
SWF1	YDR126W	NNK1	P36003	928 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	YGR045C	P53229	120 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	EAR1	Q03212	550 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-GR1	Q12085	440 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	YVC1	Q12324	675 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.73	□□□□□ -1.65
SWF1	YDR126W	YBL113C	Q7M4S9	792 aa		4.73	□□□□□ -1.65
SWF1	YDR126W	TY1A-OL	Q92392	440 aa	Known RBP	4.73	□□□□□ -1.65
SWF1	YDR126W	SHU2	P38957	223 aa		4.72	□□□□□ -1.65
SWF1	YDR126W	ELA1	P53861	379 aa	Predicted RBP	4.72	□□□□□ -1.65
SWF1	YDR126W	NUT2	Q06213	157 aa		4.72	□□□□□ -1.65
SWF1	YDR126W	GPI13	Q07830	1017 aa		4.72	□□□□□ -1.65
SWF1	YDR126W	NOC3	Q07896	663 aa	Predicted RBP	4.72	□□□□□ -1.65
SWF1	YDR126W	AVO1	Q08236	1176 aa		4.72	□□□□□ -1.65
SWF1	YDR126W	TRE1	Q08919	783 aa		4.72	□□□□□ -1.65
SWF1	YDR126W	FRT1	Q99332	602 aa		4.72	□□□□□ -1.65
SWF1	YDR126W	GAS1	P22146	559 aa	Known RBP	4.71	□□□□□ -1.66
SWF1	YDR126W	YKL077W	P36081	392 aa		4.71	□□□□□ -1.66
SWF1	YDR126W	GEF1	P37020	779 aa		4.71	□□□□□ -1.66
SWF1	YDR126W	EXO5	P38289	585 aa		4.71	□□□□□ -1.66
SWF1	YDR126W	PEX7	P39108	375 aa		4.71	□□□□□ -1.66
SWF1	YDR126W	SAM37	P50110	327 aa		4.71	□□□□□ -1.66
SWF1	YDR126W	MON1	P53129	644 aa		4.71	□□□□□ -1.66
SWF1	YDR126W	SSY1	Q03770	852 aa		4.7	□□□□□ -1.66
SWF1	YDR126W	CDA2	Q06703	312 aa		4.7	□□□□□ -1.66
SWF1	YDR126W	TSA1	P34760	196 aa	Known RBP	4.69	□□□□□ -1.66
SWF1	YDR126W	CIC1	P38779	376 aa	Known RBP	4.69	□□□□□ -1.66
SWF1	YDR126W	NOG1	Q02892	647 aa	Known RBP	4.69	□□□□□ -1.66
SWF1	YDR126W	YCS4	Q06156	1176 aa		4.69	□□□□□ -1.66
SWF1	YDR126W	HAT1	Q12341	374 aa		4.69	□□□□□ -1.66
SWF1	YDR126W	LPX1	Q12405	387 aa	Known RBP	4.69	□□□□□ -1.66
SWF1	YDR126W	NEM1	P38757	446 aa		4.68	□□□□□ -1.66
SWF1	YDR126W	SLS1	P42900	643 aa		4.68	□□□□□ -1.66
SWF1	YDR126W	PUS7	Q08647	676 aa	Known RBP	4.68	□□□□□ -1.66
SWF1	YDR126W	PRO1	P32264	428 aa		4.67	□□□□□ -1.66
SWF1	YDR126W	MTR4	P47047	1073 aa	Known RBP	4.67	□□□□□ -1.66
SWF1	YDR126W	YCR015C	P25616	317 aa		4.66	□□□□□ -1.66
SWF1	YDR126W	PTC7	P38797	343 aa		4.66	□□□□□ -1.66
SWF1	YDR126W	YAR028W	P39548	234 aa		4.66	□□□□□ -1.66
SWF1	YDR126W	TPP1	Q03796	238 aa		4.66	□□□□□ -1.66
SWF1	YDR126W	GCD6	P32501	712 aa	Known RBP	4.64	□□□□□ -1.67
SWF1	YDR126W	UTP5	Q04177	643 aa	Known RBP	4.64	□□□□□ -1.67
SWF1	YDR126W	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
SWF1	YDR126W	ESC8	Q08119	714 aa		4.64	□□□□□ -1.67
SWF1	YDR126W	PRP6	P19735	899 aa	Predicted RBP	4.63	□□□□□ -1.67
SWF1	YDR126W	RET1	P22276	1149 aa	Known RBP	4.63	□□□□□ -1.67
SWF1	YDR126W	MSH3	P25336	1018 aa		4.63	□□□□□ -1.67
SWF1	YDR126W	PRP40	P33203	583 aa	Known RBP	4.63	□□□□□ -1.67
SWF1	YDR126W	VPS35	P34110	944 aa		4.63	□□□□□ -1.67
SWF1	YDR126W	THI80	P35202	319 aa		4.63	□□□□□ -1.67
SWF1	YDR126W	HSE1	P38753	452 aa		4.63	□□□□□ -1.67
SWF1	YDR126W	GTS1	P40956	396 aa		4.63	□□□□□ -1.67
SWF1	YDR126W	HRK1	Q08732	759 aa	Known RBP	4.63	□□□□□ -1.67
SWF1	YDR126W	PHO4	P07270	312 aa	Known RBP	4.62	□□□□□ -1.67
SWF1	YDR126W	SAM35	P14693	329 aa		4.62	□□□□□ -1.67
SWF1	YDR126W	KAR2	P16474	682 aa	Known RBP	4.62	□□□□□ -1.67
SWF1	YDR126W	VMA4	P22203	233 aa	Known RBP	4.62	□□□□□ -1.67
SWF1	YDR126W	YKL222C	P35995	705 aa		4.62	□□□□□ -1.67
SWF1	YDR126W	YHL012W	P38709	493 aa		4.62	□□□□□ -1.67
SWF1	YDR126W	YHL050C	P38721	697 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms