RNA–Protein interactions for RNA: YCR054C

CTR86, Transcript of Essential protein of unknown function, yeast

Gene CTR86, Length 1,692 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR86	YCR054C	TMA7	Q3E764	64 aa	Known RBP	4.97	□□□□□ -1.61
CTR86	YCR054C	Q0182	Q9ZZW1	134 aa		4.97	□□□□□ -1.61
CTR86	YCR054C	UGA4	P32837	571 aa		4.96	□□□□□ -1.61
CTR86	YCR054C	SQT1	P35184	431 aa		4.96	□□□□□ -1.61
CTR86	YCR054C	PBY1	P38254	753 aa		4.96	□□□□□ -1.61
CTR86	YCR054C	HLJ1	P48353	224 aa		4.96	□□□□□ -1.61
CTR86	YCR054C	MSH6	Q03834	1242 aa		4.96	□□□□□ -1.61
CTR86	YCR054C	THS1	P04801	734 aa	Known RBP	4.96	□□□□□ -1.62
CTR86	YCR054C	SBP1	P10080	294 aa	Known RBP	4.96	□□□□□ -1.62
CTR86	YCR054C	SCT1	P32784	759 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	FUI1	P38196	639 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	GIP1	P38229	639 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	XKS1	P42826	600 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	YGR237C	P50089	785 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	MON1	P53129	644 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	SAS4	Q04003	481 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	DFG5	Q05031	458 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	SLX4	Q12098	748 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	YPR015C	Q12531	247 aa		4.96	□□□□□ -1.62
CTR86	YCR054C	TRX2	P22803	104 aa	Known RBP	4.95	□□□□□ -1.62
CTR86	YCR054C	AIM46	P38885	310 aa		4.95	□□□□□ -1.62
CTR86	YCR054C	RSM26	P47141	266 aa		4.95	□□□□□ -1.62
CTR86	YCR054C	UTP8	P53276	713 aa	Known RBP	4.95	□□□□□ -1.62
CTR86	YCR054C	TFB2	Q02939	513 aa		4.95	□□□□□ -1.62
CTR86	YCR054C	PMT7	Q06644	662 aa		4.95	□□□□□ -1.62
CTR86	YCR054C	ATP4	P05626	244 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	PRP9	P19736	530 aa	Known RBP	4.94	□□□□□ -1.62
CTR86	YCR054C	KAP122	P32767	1081 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	MRT4	P33201	236 aa	Known RBP	4.94	□□□□□ -1.62
CTR86	YCR054C	VBA5	P36172	582 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	YBL086C	P38177	466 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	ERP2	P39704	215 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	YTA6	P40328	754 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	ENT3	P47160	408 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	GNP1	P48813	663 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	TAF8	Q03750	510 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	ESC2	Q06340	456 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	ATG13	Q06628	738 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	YDL124W	Q07551	312 aa	Known RBP	4.94	□□□□□ -1.62
CTR86	YCR054C	YOR378W	Q08902	515 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	TMA17	Q12513	150 aa		4.94	□□□□□ -1.62
CTR86	YCR054C	TRP2	P00899	507 aa	Known RBP	4.93	□□□□□ -1.62
CTR86	YCR054C	MLF3	P32047	452 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	LYP1	P32487	611 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	PEX6	P33760	1030 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	SNF7	P39929	240 aa	Known RBP	4.93	□□□□□ -1.62
CTR86	YCR054C	ALA1	P40825	983 aa	Known RBP	4.93	□□□□□ -1.62
CTR86	YCR054C	PFD1	P46988	109 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	CTR9	P89105	1077 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	YOR296W	Q08748	1289 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	NUP145	P49687	1317 aa		4.93	□□□□□ -1.62
CTR86	YCR054C	SEC23	P15303	768 aa	Known RBP	4.92	□□□□□ -1.62
CTR86	YCR054C	SAP155	P43612	1002 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	DAS1	P47005	663 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	TY4A-J	P47023	414 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	HSV2	P50079	448 aa	Predicted RBP	4.92	□□□□□ -1.62
CTR86	YCR054C	ATG16	Q03818	150 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	NYV1	Q12255	253 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	DPS1	P04802	557 aa	Known RBP	4.92	□□□□□ -1.62
CTR86	YCR054C	MRF1	P30775	413 aa	Predicted RBP	4.92	□□□□□ -1.62
CTR86	YCR054C	ABD1	P32783	436 aa	Predicted RBP	4.92	□□□□□ -1.62
CTR86	YCR054C	SEA4	P38164	1038 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	PEX28	P38848	579 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	RTA1	P53047	317 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	MDG1	P53885	366 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	YNL165W	P53891	406 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	SIW14	P53965	281 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	PUS5	Q06244	254 aa		4.92	□□□□□ -1.62
CTR86	YCR054C	BRE1	Q07457	700 aa	Known RBP	4.92	□□□□□ -1.62
CTR86	YCR054C	COB	P00163	385 aa		4.91	□□□□□ -1.62
CTR86	YCR054C	MFT1	P33441	392 aa	Known RBP	4.91	□□□□□ -1.62
CTR86	YCR054C	NOC2	P39744	710 aa	Known RBP	4.91	□□□□□ -1.62
CTR86	YCR054C	NIT1	P40447	199 aa		4.91	□□□□□ -1.62
CTR86	YCR054C	ALR2	P43553	858 aa		4.91	□□□□□ -1.62
CTR86	YCR054C	YGR021W	P53212	290 aa		4.91	□□□□□ -1.62
CTR86	YCR054C	GIC2	Q06648	383 aa		4.91	□□□□□ -1.62
CTR86	YCR054C	SRF1	Q12516	437 aa		4.91	□□□□□ -1.62
CTR86	YCR054C	RPC31	P17890	251 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
CTR86	YCR054C	RER2	P35196	286 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	BSD2	P38356	321 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	SHU2	P38957	223 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	GDH3	P39708	457 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	VPS27	P40343	622 aa	Known RBP	4.9	□□□□□ -1.62
CTR86	YCR054C	MTR4	P47047	1073 aa	Known RBP	4.9	□□□□□ -1.62
CTR86	YCR054C	YGL140C	P53120	1219 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	YNL193W	P53870	558 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	ALO1	P54783	526 aa	Known RBP	4.9	□□□□□ -1.62
CTR86	YCR054C	FRK1	Q03002	865 aa	Predicted RBP	4.9	□□□□□ -1.62
CTR86	YCR054C	UME1	Q03010	460 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	EMG1	Q06287	252 aa	Known RBP	4.9	□□□□□ -1.62
CTR86	YCR054C	HDA2	Q06629	674 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	THI73	Q07904	523 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	GYP1	Q08484	637 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	REC8	Q12188	680 aa		4.9	□□□□□ -1.62
CTR86	YCR054C	PYC2	P32327	1180 aa	Known RBP	4.89	□□□□□ -1.63
CTR86	YCR054C	CDC11	P32458	415 aa		4.89	□□□□□ -1.63
CTR86	YCR054C	NOG1	Q02892	647 aa	Known RBP	4.89	□□□□□ -1.63
CTR86	YCR054C	YLR225C	Q05948	407 aa	Known RBP	4.89	□□□□□ -1.63
CTR86	YCR054C	COG4	Q06096	861 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms