RNA–Protein interactions for RNA: YCL036W

GFD2, Transcript of Protein of unknown function, yeast

Gene GFD2, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GFD2	YCL036W	ACK1	Q07622	623 aa	Predicted RBP	13.8	□□□□□ -0.2
GFD2	YCL036W	HXK1	P04806	485 aa	Known RBP	13.79	□□□□□ -0.2
GFD2	YCL036W	ATE1	P16639	503 aa		13.79	□□□□□ -0.2
GFD2	YCL036W	MRPL10	P36520	322 aa		13.79	□□□□□ -0.2
GFD2	YCL036W	RXT2	P38255	430 aa		13.79	□□□□□ -0.2
GFD2	YCL036W	ALG2	P43636	503 aa		13.79	□□□□□ -0.2
GFD2	YCL036W	GET3	Q12154	354 aa	Known RBP	13.79	□□□□□ -0.2
GFD2	YCL036W	DIP2	Q12220	943 aa	Predicted RBP	13.79	□□□□□ -0.2
GFD2	YCL036W	MYO1	P08964	1928 aa		13.79	□□□□□ -0.2
GFD2	YCL036W	MCM2	P29469	868 aa		13.78	□□□□□ -0.2
GFD2	YCL036W	MCM4	P30665	933 aa	Known RBP	13.78	□□□□□ -0.2
GFD2	YCL036W	AFG2	P32794	780 aa		13.78	□□□□□ -0.2
GFD2	YCL036W	MIC60	P36112	540 aa		13.78	□□□□□ -0.2
GFD2	YCL036W	PCI8	P40512	444 aa		13.78	□□□□□ -0.2
GFD2	YCL036W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.78	□□□□□ -0.2	not detected
GFD2	YCL036W	TOP1	P04786	769 aa		13.78	□□□□□ -0.2
GFD2	YCL036W	GDE1	Q02979	1223 aa		13.78	□□□□□ -0.2
GFD2	YCL036W	RPT6	Q01939	405 aa	Known RBP	13.77	□□□□□ -0.21
GFD2	YCL036W	TAF13	P11747	167 aa		13.76	□□□□□ -0.21
GFD2	YCL036W	URA1	P28272	314 aa	Predicted RBP	13.76	□□□□□ -0.21
GFD2	YCL036W	VPS8	P39702	1274 aa		13.76	□□□□□ -0.21
GFD2	YCL036W	MET6	P05694	767 aa	Known RBP	13.76	□□□□□ -0.21
GFD2	YCL036W	YKT6	P36015	200 aa	Known RBP	13.75	□□□□□ -0.21
GFD2	YCL036W	FYV10	P40492	516 aa		13.75	□□□□□ -0.21
GFD2	YCL036W	FAR11	P53917	953 aa		13.75	□□□□□ -0.21
GFD2	YCL036W	SRP40	P32583	406 aa	Predicted RBP	13.74	□□□□□ -0.21
GFD2	YCL036W	SHC1	P39000	512 aa		13.74	□□□□□ -0.21
GFD2	YCL036W	YDR341C	Q05506	607 aa	Known RBP	13.74	□□□□□ -0.21
GFD2	YCL036W	ASF1	P32447	279 aa		13.73	□□□□□ -0.21
GFD2	YCL036W	RRM3	P38766	723 aa		13.73	□□□□□ -0.21
GFD2	YCL036W	CSC1	Q06538	782 aa		13.73	□□□□□ -0.21
GFD2	YCL036W	YJL171C	P46992	396 aa		13.73	□□□□□ -0.21
GFD2	YCL036W	PTC5	Q12511	572 aa		13.73	□□□□□ -0.21
GFD2	YCL036W	ACE2	P21192	770 aa		13.72	□□□□□ -0.21
GFD2	YCL036W	RPL8B	P29453	256 aa	Known RBP	13.72	□□□□□ -0.21
GFD2	YCL036W	MPE1	P35728	441 aa	Known RBP	13.72	□□□□□ -0.21
GFD2	YCL036W	TFC8	Q12308	588 aa		13.72	□□□□□ -0.21
GFD2	YCL036W	CIT1	P00890	479 aa		13.71	□□□□□ -0.21
GFD2	YCL036W	SRP54	P20424	541 aa	Known RBP	13.71	□□□□□ -0.21
GFD2	YCL036W	PRE8	P23639	250 aa		13.71	□□□□□ -0.21
GFD2	YCL036W	GSY2	P27472	705 aa		13.71	□□□□□ -0.21
GFD2	YCL036W	NAF1	P53919	492 aa	Known RBP	13.71	□□□□□ -0.21
GFD2	YCL036W	GIS4	Q04233	774 aa		13.71	□□□□□ -0.21
GFD2	YCL036W	PCL8	Q08966	492 aa		13.71	□□□□□ -0.21
GFD2	YCL036W	SES1	P07284	462 aa	Known RBP	13.7	□□□□□ -0.22
GFD2	YCL036W	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.7	□□□□□ -0.22	not detected
GFD2	YCL036W	CHS3	P29465	1165 aa		13.7	□□□□□ -0.22
GFD2	YCL036W	STV1	P37296	890 aa		13.7	□□□□□ -0.22
GFD2	YCL036W	YGL138C	P53122	345 aa		13.7	□□□□□ -0.22
GFD2	YCL036W	CUE3	P53137	624 aa	Known RBP	13.7	□□□□□ -0.22
GFD2	YCL036W	SRM1	P21827	482 aa		13.7	□□□□□ -0.22
GFD2	YCL036W	CEX1	Q12453	761 aa		13.7	□□□□□ -0.22
GFD2	YCL036W	NBL1	Q3E7Y6	73 aa		13.7	□□□□□ -0.22
GFD2	YCL036W	UTP7	P40055	554 aa	Known RBP	13.69	□□□□□ -0.22
GFD2	YCL036W	MTC3	P53077	123 aa		13.69	□□□□□ -0.22
GFD2	YCL036W	VPS30	Q02948	557 aa		13.69	□□□□□ -0.22
GFD2	YCL036W	EIS1	Q05050	843 aa	Known RBP	13.69	□□□□□ -0.22
GFD2	YCL036W	SKG3	Q06315	1026 aa		13.69	□□□□□ -0.22
GFD2	YCL036W	FOL1	P53848	824 aa		13.68	□□□□□ -0.22
GFD2	YCL036W	SEN54	Q02825	467 aa	Predicted RBP	13.68	□□□□□ -0.22
GFD2	YCL036W	DSE3	Q08729	430 aa		13.68	□□□□□ -0.22
GFD2	YCL036W	MCM3	P24279	971 aa	Known RBP	13.67	□□□□□ -0.22
GFD2	YCL036W	SPB4	P25808	606 aa	Predicted RBP	13.67	□□□□□ -0.22
GFD2	YCL036W	NOC2	P39744	710 aa	Known RBP	13.67	□□□□□ -0.22
GFD2	YCL036W	CTR9	P89105	1077 aa		13.67	□□□□□ -0.22
GFD2	YCL036W	CRF1	Q04930	467 aa		13.67	□□□□□ -0.22
GFD2	YCL036W	TOM71	P38825	639 aa	Known RBP	13.67	□□□□□ -0.22
GFD2	YCL036W	MDM1	Q01846	1127 aa		13.67	□□□□□ -0.22
GFD2	YCL036W	MMR1	Q06324	491 aa		13.67	□□□□□ -0.22
GFD2	YCL036W	YDL124W	Q07551	312 aa	Known RBP	13.67	□□□□□ -0.22
GFD2	YCL036W	YOR296W	Q08748	1289 aa		13.67	□□□□□ -0.22
GFD2	YCL036W	CLF1	Q12309	687 aa	Predicted RBP	13.67	□□□□□ -0.22
GFD2	YCL036W	RPL22A	P05749	121 aa	Known RBP	13.66	□□□□□ -0.22
GFD2	YCL036W	NUC1	P08466	329 aa		13.66	□□□□□ -0.22
GFD2	YCL036W	LYS14	P40971	790 aa		13.66	□□□□□ -0.22
GFD2	YCL036W	VPS4	P52917	437 aa		13.66	□□□□□ -0.22
GFD2	YCL036W	TRM44	Q02648	567 aa	Known RBP	13.66	□□□□□ -0.22
GFD2	YCL036W	ATG20	Q07528	640 aa		13.66	□□□□□ -0.22
GFD2	YCL036W	ALG1	P16661	449 aa		13.65	□□□□□ -0.22
GFD2	YCL036W	MAK11	P20484	414 aa	Known RBP	13.65	□□□□□ -0.22
GFD2	YCL036W	MSM1	P22438	575 aa		13.65	□□□□□ -0.22
GFD2	YCL036W	ADP1	P25371	1049 aa		13.65	□□□□□ -0.22
GFD2	YCL036W	BMH1	P29311	267 aa	Known RBP	13.65	□□□□□ -0.22
GFD2	YCL036W	TIM50	Q02776	476 aa		13.65	□□□□□ -0.22
GFD2	YCL036W	WAR1	Q03631	944 aa		13.65	□□□□□ -0.22
GFD2	YCL036W	TIP41	Q12199	356 aa		13.65	□□□□□ -0.22
GFD2	YCL036W	RPS9B	P05755	195 aa	Known RBP	13.64	□□□□□ -0.23
GFD2	YCL036W	KIN1	P13185	1064 aa		13.64	□□□□□ -0.23
GFD2	YCL036W	GAP1	P19145	602 aa	Predicted RBP	13.64	□□□□□ -0.23
GFD2	YCL036W	PSY4	P38193	441 aa		13.64	□□□□□ -0.23
GFD2	YCL036W	SAC6	P32599	642 aa	Known RBP	13.63	□□□□□ -0.23
GFD2	YCL036W	YBL028C	P38202	106 aa		13.63	□□□□□ -0.23
GFD2	YCL036W	SMD2	Q06217	110 aa	Known RBP	13.63	□□□□□ -0.23
GFD2	YCL036W	TUS1	Q06412	1307 aa		13.63	□□□□□ -0.23
GFD2	YCL036W	HIS4	P00815	799 aa	Known RBP	13.62	□□□□□ -0.23
GFD2	YCL036W	CYC8	P14922	966 aa		13.62	□□□□□ -0.23
GFD2	YCL036W	CST26	P38226	397 aa		13.62	□□□□□ -0.23
GFD2	YCL036W	SAM2	P19358	384 aa	Known RBP	13.61	□□□□□ -0.23
GFD2	YCL036W	CCT3	P39077	534 aa	Known RBP	13.61	□□□□□ -0.23
GFD2	YCL036W	TRS120	Q04183	1289 aa		13.61	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms