RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 PTC5Q12511 572 aa11.58□□□□□ -0.56
RDN18-1RDN18-1 VID27P40157 782 aa11.58□□□□□ -0.56
RDN18-1RDN18-1 GSM1P42950 618 aa11.58□□□□□ -0.56
RDN18-1RDN18-1 PIP2P52960 996 aa11.58□□□□□ -0.56
RDN18-1RDN18-1 CUE3P53137 624 aaKnown RBP11.58□□□□□ -0.56
RDN18-1RDN18-1 CSC1Q06538 782 aa11.58□□□□□ -0.56
RDN18-1RDN18-1 RNR3P21672 869 aaKnown RBP11.57□□□□□ -0.56
RDN18-1RDN18-1 EBP2P36049 427 aaKnown RBP11.57□□□□□ -0.56
RDN18-1RDN18-1 YPL260WQ08977 551 aa11.57□□□□□ -0.56
RDN18-1RDN18-1 RAD61Q99359 647 aa11.57□□□□□ -0.56
RDN18-1RDN18-1 MET6P05694 767 aaKnown RBP11.56□□□□□ -0.56
RDN18-1RDN18-1 GAS5Q08193 484 aa11.56□□□□□ -0.56
RDN18-1RDN18-1 TMA16Q08687 178 aa11.56□□□□□ -0.56
RDN18-1RDN18-1 PSF3Q12146 194 aa11.56□□□□□ -0.56
RDN18-1RDN18-1 GDE1Q02979 1223 aa11.56□□□□□ -0.56
RDN18-1RDN18-1 UBX2Q04228 584 aa11.56□□□□□ -0.56
RDN18-1RDN18-1 EIS1Q05050 843 aaKnown RBP11.55□□□□□ -0.56
RDN18-1RDN18-1 GSC2P40989 1895 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 ARG82P07250 355 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 LYS14P40971 790 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 FAR11P53917 953 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 MMR1Q06324 491 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 AFT2Q08957 416 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 MYO1P08964 1928 aa11.54□□□□□ -0.56
RDN18-1RDN18-1 STI1P15705 589 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56not detected
RDN18-1RDN18-1 MCM3P24279 971 aaKnown RBP11.53□□□□□ -0.56
RDN18-1RDN18-1 GIS4Q04233 774 aa11.53□□□□□ -0.56
RDN18-1RDN18-1 RPL22AP05749 121 aaKnown RBP11.53□□□□□ -0.56
RDN18-1RDN18-1 SAC6P32599 642 aaKnown RBP11.53□□□□□ -0.56
RDN18-1RDN18-1 TFG2P41896 400 aaPredicted RBP11.53□□□□□ -0.56
RDN18-1RDN18-1 APL6P46682 809 aa11.53□□□□□ -0.56
RDN18-1RDN18-1 STR2P47164 639 aa11.53□□□□□ -0.56
RDN18-1RDN18-1 RPT6Q01939 405 aaKnown RBP11.53□□□□□ -0.56
RDN18-1RDN18-1 NOP58Q12499 511 aaKnown RBP11.53□□□□□ -0.56
RDN18-1RDN18-1 ASF1P32447 279 aa11.52□□□□□ -0.57
RDN18-1RDN18-1 GTT3P39996 337 aa11.52□□□□□ -0.57
RDN18-1RDN18-1 ALG2P43636 503 aa11.52□□□□□ -0.57
RDN18-1RDN18-1 YGL138CP53122 345 aa11.52□□□□□ -0.57
RDN18-1RDN18-1 PRP42Q03776 544 aaKnown RBP11.52□□□□□ -0.57
RDN18-1RDN18-1 YDR341CQ05506 607 aaKnown RBP11.52□□□□□ -0.57
RDN18-1RDN18-1 BMH1P29311 267 aaKnown RBP11.51□□□□□ -0.57
RDN18-1RDN18-1 ERT1P38140 529 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 TPM2P40414 161 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 PUS6P53294 404 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 HOS3Q02959 697 aaKnown RBP11.51□□□□□ -0.57
RDN18-1RDN18-1 FLO11P08640 1367 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 SRP54P20424 541 aaKnown RBP11.51□□□□□ -0.57
RDN18-1RDN18-1 ACE2P21192 770 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 CDC15P27636 974 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 KEL3Q08979 651 aaPredicted RBP11.51□□□□□ -0.57
RDN18-1RDN18-1 APL4Q12028 832 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 NBL1Q3E7Y6 73 aa11.51□□□□□ -0.57
RDN18-1RDN18-1 PRI1P10363 409 aa11.5□□□□□ -0.57
RDN18-1RDN18-1 RPS7AP26786 190 aaKnown RBP11.5□□□□□ -0.57
RDN18-1RDN18-1 ADE17P38009 592 aaKnown RBP11.49□□□□□ -0.57
RDN18-1RDN18-1 LEO1P38439 464 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 VPS8P39702 1274 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 MSN5P52918 1224 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 VPS75P53853 264 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 NAF1P53919 492 aaKnown RBP11.49□□□□□ -0.57
RDN18-1RDN18-1 YOR296WQ08748 1289 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 CEX1Q12453 761 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 HIS4P00815 799 aaKnown RBP11.49□□□□□ -0.57
RDN18-1RDN18-1 ALG1P16661 449 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 PSR2Q07949 397 aa11.49□□□□□ -0.57
RDN18-1RDN18-1 PDC1P06169 563 aaKnown RBP11.48□□□□□ -0.57
RDN18-1RDN18-1 UGA2P38067 497 aa11.48□□□□□ -0.57
RDN18-1RDN18-1 PCH2P38126 564 aa11.48□□□□□ -0.57
RDN18-1RDN18-1 HCR1Q05775 265 aaKnown RBP11.48□□□□□ -0.57
RDN18-1RDN18-1 CIT1P00890 479 aa11.47□□□□□ -0.57
RDN18-1RDN18-1 RPL8BP29453 256 aaKnown RBP11.47□□□□□ -0.57
RDN18-1RDN18-1 PXL1P36166 706 aa11.47□□□□□ -0.57
RDN18-1RDN18-1 RTT107P38850 1070 aa11.47□□□□□ -0.57
RDN18-1RDN18-1 OSW7P43611 510 aa11.47□□□□□ -0.57
RDN18-1RDN18-1 JSN1P47135 1091 aaKnown RBP RIP-Chip data11.47□□□□□ -0.57not detected
RDN18-1RDN18-1 GFD1Q04839 188 aaKnown RBP11.47□□□□□ -0.57
RDN18-1RDN18-1 YGR237CP50089 785 aa11.46□□□□□ -0.57
RDN18-1RDN18-1 LSC2P53312 427 aa11.46□□□□□ -0.57
RDN18-1RDN18-1 DSE3Q08729 430 aa11.46□□□□□ -0.57
RDN18-1RDN18-1 PHO13P19881 312 aa11.46□□□□□ -0.58
RDN18-1RDN18-1 CHS3P29465 1165 aa11.46□□□□□ -0.58
RDN18-1RDN18-1 EAF6P47128 113 aa11.46□□□□□ -0.58
RDN18-1RDN18-1 TIP41Q12199 356 aa11.46□□□□□ -0.58
RDN18-1RDN18-1 GRX6Q12438 231 aa11.46□□□□□ -0.58
RDN18-1RDN18-1 ICL1P28240 557 aaPredicted RBP11.45□□□□□ -0.58
RDN18-1RDN18-1 HIR1P32479 840 aa11.45□□□□□ -0.58
RDN18-1RDN18-1 YKU70P32807 602 aa11.45□□□□□ -0.58
RDN18-1RDN18-1 SHM1P37292 490 aaPredicted RBP11.45□□□□□ -0.58
RDN18-1RDN18-1 MGA2P40578 1113 aa11.45□□□□□ -0.58
RDN18-1RDN18-1 DAK2P43550 591 aa11.45□□□□□ -0.58
RDN18-1RDN18-1 KIN4Q01919 800 aa11.45□□□□□ -0.58
RDN18-1RDN18-1 TRS120Q04183 1289 aa11.45□□□□□ -0.58
RDN18-1RDN18-1 YET1P35723 206 aa11.44□□□□□ -0.58
RDN18-1RDN18-1 YKL222CP35995 705 aa11.44□□□□□ -0.58
RDN18-1RDN18-1 STT3P39007 718 aaKnown RBP11.44□□□□□ -0.58
RDN18-1RDN18-1 VPS30Q02948 557 aa11.44□□□□□ -0.58
RDN18-1RDN18-1 MSH3P25336 1018 aa11.44□□□□□ -0.58
RDN18-1RDN18-1 SPB4P25808 606 aaPredicted RBP11.44□□□□□ -0.58
RDN18-1RDN18-1 SEC65P29478 273 aa11.44□□□□□ -0.58
RDN18-1RDN18-1 ERG7P38604 731 aa11.44□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms