RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 RPIAP49247 311 aa9.16□□□□□ -0.94
HNRNPC-233ENST00000557768 PROCA1Q8NCQ7 364 aaPredicted RBP9.16□□□□□ -0.94
HNRNPC-233ENST00000557768 PDZRN3Q9UPQ7 1066 aa9.16□□□□□ -0.94
HNRNPC-233ENST00000557768 LILRB3O75022 631 aa9.15□□□□□ -0.94
HNRNPC-233ENST00000557768 TUSC1Q2TAM9 212 aa9.15□□□□□ -0.94
HNRNPC-233ENST00000557768 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
HNRNPC-233ENST00000557768 FBXO31Q5XUX0 539 aaPredicted RBP9.15□□□□□ -0.94
HNRNPC-233ENST00000557768 CCNYL3P0C7X3 344 aa9.14□□□□□ -0.95
HNRNPC-233ENST00000557768 FOXC1Q12948 553 aa9.14□□□□□ -0.95
HNRNPC-233ENST00000557768 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
HNRNPC-233ENST00000557768 TNFRSF10AO00220 468 aa9.13□□□□□ -0.95
HNRNPC-233ENST00000557768 PTPRNQ16849 979 aa9.13□□□□□ -0.95
HNRNPC-233ENST00000557768 DESI1Q6ICB0 168 aa9.13□□□□□ -0.95
HNRNPC-233ENST00000557768 PRXQ9BXM0 1461 aa9.13□□□□□ -0.95
HNRNPC-233ENST00000557768 TRIM32Q13049 653 aa9.12□□□□□ -0.95
HNRNPC-233ENST00000557768 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-233ENST00000557768 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
HNRNPC-233ENST00000557768 ABCA9Q8IUA7 1624 aa9.12□□□□□ -0.95
HNRNPC-233ENST00000557768 LYPD8Q6UX82 237 aa9.11□□□□□ -0.95
HNRNPC-233ENST00000557768 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
HNRNPC-233ENST00000557768 ATP10BO94823 1461 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 RAPGEF6Q8TEU7 1601 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 CTHP32929 405 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 LAPTM4AQ15012 233 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 EVA1BQ9NVM1 165 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 SAMD9Q5K651 1589 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
HNRNPC-233ENST00000557768 NRG2O14511 850 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-233ENST00000557768 PER1O15534 1290 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-233ENST00000557768 Q6ZNB5 142 aa9.09□□□□□ -0.95
HNRNPC-233ENST00000557768 HELBQ8NG08 1087 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-233ENST00000557768 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
HNRNPC-233ENST00000557768 ADAMTSL3P82987 1691 aa9.09□□□□□ -0.95
HNRNPC-233ENST00000557768 GDF9O60383 454 aa9.08□□□□□ -0.96
HNRNPC-233ENST00000557768 KCNH2Q12809 1159 aa9.08□□□□□ -0.96
HNRNPC-233ENST00000557768 PCMTD1Q96MG8 357 aaPredicted RBP9.08□□□□□ -0.96
HNRNPC-233ENST00000557768 UNC93B1Q9H1C4 597 aa9.07□□□□□ -0.96
HNRNPC-233ENST00000557768 MAP10Q9P2G4 905 aa9.07□□□□□ -0.96
HNRNPC-233ENST00000557768 BCORL1Q5H9F3 1711 aa9.07□□□□□ -0.96
HNRNPC-233ENST00000557768 FRMPD1Q5SYB0 1578 aa9.07□□□□□ -0.96
HNRNPC-233ENST00000557768 PRR20EP86478 221 aa9.06□□□□□ -0.96
HNRNPC-233ENST00000557768 PRR20CP86479 221 aa9.06□□□□□ -0.96
HNRNPC-233ENST00000557768 PRR20DP86480 221 aa9.06□□□□□ -0.96
HNRNPC-233ENST00000557768 PRR20BP86481 221 aa9.06□□□□□ -0.96
HNRNPC-233ENST00000557768 PRR20AP86496 221 aa9.06□□□□□ -0.96
HNRNPC-233ENST00000557768 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
HNRNPC-233ENST00000557768 MADDQ8WXG6 1647 aa9.05□□□□□ -0.96
HNRNPC-233ENST00000557768 RICTORQ6R327 1708 aa9.05□□□□□ -0.96
HNRNPC-233ENST00000557768 RAPGEF3O95398 923 aa9.05□□□□□ -0.96
HNRNPC-233ENST00000557768 SKOR1P84550 965 aa9.05□□□□□ -0.96
HNRNPC-233ENST00000557768 CTDSPL2Q05D32 466 aa9.05□□□□□ -0.96
HNRNPC-233ENST00000557768 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
HNRNPC-233ENST00000557768 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-233ENST00000557768 PTPRMP28827 1452 aa9.04□□□□□ -0.96
HNRNPC-233ENST00000557768 WNT7AO00755 349 aa9.04□□□□□ -0.96
HNRNPC-233ENST00000557768 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
HNRNPC-233ENST00000557768 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
HNRNPC-233ENST00000557768 BAP1Q92560 729 aa9.04□□□□□ -0.96
HNRNPC-233ENST00000557768 NEO1Q92859 1461 aa9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 AP1G2O75843 785 aa9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 RANGAP1P46060 587 aaPredicted RBP9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 WNT7BP56706 349 aa9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 CYP4X1Q8N118 509 aa9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 MRGPRX2Q96LB1 330 aa9.03□□□□□ -0.96
HNRNPC-233ENST00000557768 NUP153P49790 1475 aaKnown RBP9.02□□□□□ -0.96
HNRNPC-233ENST00000557768 PHLDB1Q86UU1 1377 aa9.02□□□□□ -0.97
HNRNPC-233ENST00000557768 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
HNRNPC-233ENST00000557768 RFC5P40937 340 aa9.02□□□□□ -0.97
HNRNPC-233ENST00000557768 SIGLEC1Q9BZZ2 1709 aa9.02□□□□□ -0.97
HNRNPC-233ENST00000557768 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 SH3BP2P78314 561 aa9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 EHBP1Q8NDI1 1231 aa9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 LRRN4Q8WUT4 740 aa9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 CFAP74Q9C0B2 1584 aa9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 ZMYND15Q9H091 742 aa9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 ARID4BQ4LE39 1312 aaPredicted RBP9.01□□□□□ -0.97
HNRNPC-233ENST00000557768 ARHGEF40Q8TER5 1519 aa9□□□□□ -0.97
HNRNPC-233ENST00000557768 TTC37Q6PGP7 1564 aa9□□□□□ -0.97
HNRNPC-233ENST00000557768 FHOD3Q2V2M9 1422 aa9□□□□□ -0.97
HNRNPC-233ENST00000557768 PCF11O94913 1555 aaKnown RBP8.99□□□□□ -0.97
HNRNPC-233ENST00000557768 ZNF511Q8NB15 262 aa8.99□□□□□ -0.97
HNRNPC-233ENST00000557768 TOR4AQ9NXH8 423 aa8.99□□□□□ -0.97
HNRNPC-233ENST00000557768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.99□□□□□ -0.971e-13■■■□□ 15.2
HNRNPC-233ENST00000557768 FER1L4A9Z1Z3 1794 aa8.99□□□□□ -0.97
HNRNPC-233ENST00000557768 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
HNRNPC-233ENST00000557768 TRAF7Q6Q0C0 670 aa8.98□□□□□ -0.97
HNRNPC-233ENST00000557768 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
HNRNPC-233ENST00000557768 FANCAO15360 1455 aa8.97□□□□□ -0.97
HNRNPC-233ENST00000557768 DENND4BO75064 1496 aaPredicted RBP8.97□□□□□ -0.97
HNRNPC-233ENST00000557768 DGAT1O75907 488 aa8.97□□□□□ -0.97
HNRNPC-233ENST00000557768 FBXO41Q8TF61 875 aa8.97□□□□□ -0.97
HNRNPC-233ENST00000557768 AKNAQ7Z591 1439 aa8.97□□□□□ -0.97
HNRNPC-233ENST00000557768 ZMYM4Q5VZL5 1548 aa8.96□□□□□ -0.97
HNRNPC-233ENST00000557768 PLEKHD1A6NEE1 506 aa8.96□□□□□ -0.98
HNRNPC-233ENST00000557768 USP17L8P0C7I0 530 aa8.96□□□□□ -0.98
HNRNPC-233ENST00000557768 AGERQ15109 404 aa8.96□□□□□ -0.98
HNRNPC-233ENST00000557768 FOXJ1Q92949 421 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms