RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-210ENST00000555252 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 GBP4Q96PP9 640 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 TECPR2O15040 1411 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 KIF16BQ96L93 1317 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 WAPLQ7Z5K2 1190 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 SMC5Q8IY18 1101 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 TRIM44Q96DX7 344 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 SENP3Q9H4L4 574 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
MTHFD1-210ENST00000555252 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
MTHFD1-210ENST00000555252 PPIP5K1Q6PFW1 1433 aa13.37□□□□□ -0.27
MTHFD1-210ENST00000555252 LRRC7Q96NW7 1537 aa13.36□□□□□ -0.27
MTHFD1-210ENST00000555252 TERF1P54274 439 aa13.36□□□□□ -0.27
MTHFD1-210ENST00000555252 BRPF1P55201 1214 aaPredicted RBP13.36□□□□□ -0.27
MTHFD1-210ENST00000555252 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
MTHFD1-210ENST00000555252 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
MTHFD1-210ENST00000555252 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
MTHFD1-210ENST00000555252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
MTHFD1-210ENST00000555252 CPS1P31327 1500 aa13.35□□□□□ -0.27
MTHFD1-210ENST00000555252 TRIM27P14373 513 aa13.35□□□□□ -0.27
MTHFD1-210ENST00000555252 MLECQ14165 292 aa13.35□□□□□ -0.27
MTHFD1-210ENST00000555252 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
MTHFD1-210ENST00000555252 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-210ENST00000555252 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
MTHFD1-210ENST00000555252 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
MTHFD1-210ENST00000555252 GZF1Q9H116 711 aaPredicted RBP13.34□□□□□ -0.27
MTHFD1-210ENST00000555252 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
MTHFD1-210ENST00000555252 METP08581 1390 aa13.34□□□□□ -0.27
MTHFD1-210ENST00000555252 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.27
MTHFD1-210ENST00000555252 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.27
MTHFD1-210ENST00000555252 TNRQ92752 1358 aa13.33□□□□□ -0.28
MTHFD1-210ENST00000555252 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
MTHFD1-210ENST00000555252 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
MTHFD1-210ENST00000555252 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
MTHFD1-210ENST00000555252 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
MTHFD1-210ENST00000555252 MON2Q7Z3U7 1717 aa13.33□□□□□ -0.28
MTHFD1-210ENST00000555252 IL13P35225 146 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 COG3Q96JB2 828 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 PPP1R9BQ96SB3 815 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 PDCL3Q9H2J4 239 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 GNAI1P63096 354 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 ITPRIPQ8IWB1 547 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 ZMYND15Q9H091 742 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
MTHFD1-210ENST00000555252 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
MTHFD1-210ENST00000555252 TMEM2Q9UHN6 1383 aa13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 TXNDC2Q86VQ3 553 aa13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 HS1BP3Q53T59 392 aa13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-210ENST00000555252 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
MTHFD1-210ENST00000555252 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
MTHFD1-210ENST00000555252 NME9Q86XW9 330 aa13.29□□□□□ -0.28
MTHFD1-210ENST00000555252 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
MTHFD1-210ENST00000555252 C3P01024 1663 aa13.29□□□□□ -0.28
MTHFD1-210ENST00000555252 TMEM57Q8N5G2 664 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 ANP32BQ92688 251 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 ARXQ96QS3 562 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
MTHFD1-210ENST00000555252 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.28
MTHFD1-210ENST00000555252 ZNF853P0CG23 659 aa13.27□□□□□ -0.28
MTHFD1-210ENST00000555252 PIK3R4Q99570 1358 aa13.27□□□□□ -0.29
MTHFD1-210ENST00000555252 NUCB1Q02818 461 aa13.27□□□□□ -0.29
MTHFD1-210ENST00000555252 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.29
MTHFD1-210ENST00000555252 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
MTHFD1-210ENST00000555252 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
MTHFD1-210ENST00000555252 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
MTHFD1-210ENST00000555252 VAMP4O75379 141 aa13.26□□□□□ -0.29
MTHFD1-210ENST00000555252 OFD1O75665 1012 aa13.26□□□□□ -0.29
MTHFD1-210ENST00000555252 HMOX1P09601 288 aa13.26□□□□□ -0.29
MTHFD1-210ENST00000555252 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
MTHFD1-210ENST00000555252 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
MTHFD1-210ENST00000555252 KLHL40Q2TBA0 621 aa13.25□□□□□ -0.29
MTHFD1-210ENST00000555252 MRPL50Q8N5N7 158 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-210ENST00000555252 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
MTHFD1-210ENST00000555252 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
MTHFD1-210ENST00000555252 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
MTHFD1-210ENST00000555252 K7ELQ4 463 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-210ENST00000555252 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
MTHFD1-210ENST00000555252 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
MTHFD1-210ENST00000555252 FBLN1P23142 703 aa13.24□□□□□ -0.29
MTHFD1-210ENST00000555252 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms