RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 LRRCC1Q9C099 1032 aa9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 FANCAO15360 1455 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 XRCC6P12956 609 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 CCDC39Q9UFE4 941 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 EMILIN1Q9Y6C2 1016 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 H3BQV1 296 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 TPM2P07951 284 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 CLASRPQ8N2M8 674 aaKnown RBP9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 FAM184AQ8NB25 1140 aa9.93□□□□□ -0.82
PRKAB1-207ENST00000542698 SSFA2P28290 1259 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 GNL2Q13823 731 aaKnown RBP9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 RNF20Q5VTR2 975 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 SMC5Q8IY18 1101 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 ANKRD36BQ8N2N9 1353 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 NEXNQ0ZGT2 675 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 G3BP1Q13283 466 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 GORABQ5T7V8 394 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 ARHGAP45Q92619 1136 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 PUS7Q96PZ0 661 aaKnown RBP9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 CNTROBQ8N137 903 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 KDM5CP41229 1560 aa9.92□□□□□ -0.82
PRKAB1-207ENST00000542698 FBLN1P23142 703 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 NUTM2GQ5VZR2 741 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 NME9Q86XW9 330 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 GOLGA6L19H0YKK7 550 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 ZSCAN30Q86W11 494 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 ZBTB40Q9NUA8 1239 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 SMARCA5O60264 1052 aaPredicted RBP9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 MCM10Q7L590 875 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 BECN2A8MW95 431 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 SF3A1Q15459 793 aaKnown RBP9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 SRCIN1Q9C0H9 1055 aa9.91□□□□□ -0.82
PRKAB1-207ENST00000542698 ADCY10Q96PN6 1610 aa9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 DDX58O95786 925 aaKnown RBP9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 HDGFL1Q5TGJ6 251 aa9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 PANK2Q9BZ23 570 aa9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 TRMT2AQ8IZ69 625 aaKnown RBP9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 SNX21Q969T3 373 aa9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 MBIPQ9NS73 344 aa9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 MIS18AQ9NYP9 233 aa9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 ZNF330Q9Y3S2 320 aaPredicted RBP9.9□□□□□ -0.82
PRKAB1-207ENST00000542698 WDR33Q9C0J8 1336 aaKnown RBP9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 BICD2Q8TD16 824 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 MAP7D2Q96T17 732 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 ZNF521Q96K83 1311 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 ADGBQ8N7X0 1667 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 MBD5Q9P267 1494 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 TPM4P67936 248 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 CCDC9Q9Y3X0 531 aaKnown RBP9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 FIBPO43427 364 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 LETM1O95202 739 aaPredicted RBP9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 BAG4O95429 457 aaKnown RBP9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 IL1RAPL2Q9NP60 686 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 ABCA8O94911 1581 aa9.89□□□□□ -0.83
PRKAB1-207ENST00000542698 PSME1Q06323 249 aa9.88□□□□□ -0.83
PRKAB1-207ENST00000542698 ABTB2Q8N961 1025 aa9.88□□□□□ -0.83
PRKAB1-207ENST00000542698 UPF3BQ9BZI7 483 aaKnown RBP9.88□□□□□ -0.83
PRKAB1-207ENST00000542698 FAM83GA6ND36 823 aa9.88□□□□□ -0.83
PRKAB1-207ENST00000542698 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
PRKAB1-207ENST00000542698 MAGI2Q86UL8 1455 aa9.88□□□□□ -0.83
PRKAB1-207ENST00000542698 SYCE3A1L190 88 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 WASLO00401 505 aaPredicted RBP9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 RRP9O43818 475 aaKnown RBP9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 VAMP4O75379 141 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 KLHL40Q2TBA0 621 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 CHMP4CQ96CF2 233 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 RBM42Q9BTD8 480 aaKnown RBP9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 F6X3S4 739 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 TAF7LQ5H9L4 462 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 PDCP20941 246 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 PSMA5P28066 241 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 CLCN1P35523 988 aa9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 AIMP1Q12904 312 aaKnown RBP9.87□□□□□ -0.83
PRKAB1-207ENST00000542698 SRGAP3O43295 1099 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 SASS6Q6UVJ0 657 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 POLKQ9UBT6 870 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 MX1P20591 662 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 TTC22Q5TAA0 569 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 MPNDQ8N594 471 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 MRPL50Q8N5N7 158 aaKnown RBP9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 TSPYL6Q8N831 410 aa9.86□□□□□ -0.83
PRKAB1-207ENST00000542698 MAP4K4O95819 1239 aaPredicted RBP9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 CROCC2H7BZ55 1655 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 PTPRCP08575 1304 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 SLC26A8Q96RN1 970 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 HMGN5P82970 282 aaKnown RBP9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 FSD1Q9BTV5 496 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 CYP46A1Q9Y6A2 500 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms