RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 MRE11P49959 708 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 GRPEL1Q9HAV7 217 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 ZFYVE9O95405 1425 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 FAM135BQ49AJ0 1406 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
DDB1-204ENST00000535147 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
DDB1-204ENST00000535147 ANKRD26Q9UPS8 1709 aa12.8□□□□□ -0.36
DDB1-204ENST00000535147 FAM83GA6ND36 823 aa12.8□□□□□ -0.36
DDB1-204ENST00000535147 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
DDB1-204ENST00000535147 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
DDB1-204ENST00000535147 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 RAB3GAP1Q15042 981 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 ARHGEF40Q8TER5 1519 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 DIP2CQ9Y2E4 1556 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
DDB1-204ENST00000535147 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
DDB1-204ENST00000535147 GNAI1P63096 354 aa12.78□□□□□ -0.36
DDB1-204ENST00000535147 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
DDB1-204ENST00000535147 NME9Q86XW9 330 aa12.78□□□□□ -0.36
DDB1-204ENST00000535147 GAS2L2Q8NHY3 880 aa12.78□□□□□ -0.36
DDB1-204ENST00000535147 ARHGAP45Q92619 1136 aa12.78□□□□□ -0.36
DDB1-204ENST00000535147 K7ELQ4 463 aaPredicted RBP12.77□□□□□ -0.36
DDB1-204ENST00000535147 GBP4Q96PP9 640 aa12.77□□□□□ -0.36
DDB1-204ENST00000535147 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
DDB1-204ENST00000535147 PTCH1Q13635 1447 aa12.77□□□□□ -0.37
DDB1-204ENST00000535147 ABCC4O15439 1325 aa12.77□□□□□ -0.37
DDB1-204ENST00000535147 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
DDB1-204ENST00000535147 SSFA2P28290 1259 aa12.77□□□□□ -0.37
DDB1-204ENST00000535147 IL13P35225 146 aa12.77□□□□□ -0.37
DDB1-204ENST00000535147 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
DDB1-204ENST00000535147 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
DDB1-204ENST00000535147 CLCN1P35523 988 aa12.76□□□□□ -0.37
DDB1-204ENST00000535147 RRS1Q15050 365 aaKnown RBP12.76□□□□□ -0.37
DDB1-204ENST00000535147 NAP1L5Q96NT1 182 aaPredicted RBP12.76□□□□□ -0.37
DDB1-204ENST00000535147 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
DDB1-204ENST00000535147 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
DDB1-204ENST00000535147 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
DDB1-204ENST00000535147 ERBB4Q15303 1308 aa12.76□□□□□ -0.37
DDB1-204ENST00000535147 CLTCQ00610 1675 aaKnown RBP12.75□□□□□ -0.37
DDB1-204ENST00000535147 C16orf71Q8IYS4 520 aaPredicted RBP12.75□□□□□ -0.37
DDB1-204ENST00000535147 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
DDB1-204ENST00000535147 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
DDB1-204ENST00000535147 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
DDB1-204ENST00000535147 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
DDB1-204ENST00000535147 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
DDB1-204ENST00000535147 CDC45O75419 566 aa12.75□□□□□ -0.37
DDB1-204ENST00000535147 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
DDB1-204ENST00000535147 PLCB2Q00722 1185 aa12.74□□□□□ -0.37
DDB1-204ENST00000535147 PLEKHM2Q8IWE5 1019 aa12.74□□□□□ -0.37
DDB1-204ENST00000535147 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
DDB1-204ENST00000535147 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
DDB1-204ENST00000535147 APBB1O00213 710 aa12.74□□□□□ -0.37
DDB1-204ENST00000535147 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
DDB1-204ENST00000535147 PREX1Q8TCU6 1659 aa12.73□□□□□ -0.37
DDB1-204ENST00000535147 NEO1Q92859 1461 aa12.73□□□□□ -0.37
DDB1-204ENST00000535147 ESPNB1AK53 854 aa12.72□□□□□ -0.37
DDB1-204ENST00000535147 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
DDB1-204ENST00000535147 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
DDB1-204ENST00000535147 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
DDB1-204ENST00000535147 SKOR2Q2VWA4 1001 aaPredicted RBP12.71□□□□□ -0.38
DDB1-204ENST00000535147 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.38
DDB1-204ENST00000535147 DCTPP1Q9H773 170 aa12.71□□□□□ -0.38
DDB1-204ENST00000535147 AK9Q5TCS8 1911 aa12.71□□□□□ -0.38
DDB1-204ENST00000535147 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
DDB1-204ENST00000535147 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
DDB1-204ENST00000535147 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
DDB1-204ENST00000535147 RIMS2Q9UQ26 1411 aa12.7□□□□□ -0.38
DDB1-204ENST00000535147 BAG4O95429 457 aaKnown RBP12.7□□□□□ -0.38
DDB1-204ENST00000535147 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
DDB1-204ENST00000535147 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
DDB1-204ENST00000535147 DDX49Q9Y6V7 483 aaKnown RBP12.7□□□□□ -0.38
DDB1-204ENST00000535147 ATP7BP35670 1465 aa12.7□□□□□ -0.38
DDB1-204ENST00000535147 PKP1Q13835 747 aa12.69□□□□□ -0.38
DDB1-204ENST00000535147 TXNDC2Q86VQ3 553 aa12.69□□□□□ -0.38
DDB1-204ENST00000535147 COG3Q96JB2 828 aa12.69□□□□□ -0.38
DDB1-204ENST00000535147 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
DDB1-204ENST00000535147 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
DDB1-204ENST00000535147 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
DDB1-204ENST00000535147 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
DDB1-204ENST00000535147 USP26Q9BXU7 913 aa12.68□□□□□ -0.38
DDB1-204ENST00000535147 EDC4Q6P2E9 1401 aaKnown RBP12.68□□□□□ -0.38
DDB1-204ENST00000535147 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
DDB1-204ENST00000535147 GOLGA6L22H0YM25 854 aa12.68□□□□□ -0.38
DDB1-204ENST00000535147 MCTP1Q6DN14 999 aa12.68□□□□□ -0.38
DDB1-204ENST00000535147 MCM10Q7L590 875 aa12.68□□□□□ -0.38
DDB1-204ENST00000535147 NUDT16Q96DE0 195 aaKnown RBP12.68□□□□□ -0.38
DDB1-204ENST00000535147 DLG5Q8TDM6 1919 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
DDB1-204ENST00000535147 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
DDB1-204ENST00000535147 SDSP20132 328 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 RABEP1Q15276 862 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 INTS3Q68E01 1043 aaKnown RBP12.67□□□□□ -0.38
DDB1-204ENST00000535147 SULT6B1Q6IMI4 303 aa12.67□□□□□ -0.38
DDB1-204ENST00000535147 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms