RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 PTPRGP23470 1445 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 SOBPA7XYQ1 873 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 ADH1CP00326 375 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 TIMP2P16035 220 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 ARAP1Q96P48 1450 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 DISP1Q96F81 1524 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 SAMD9Q5K651 1589 aa5.93□□□□□ -1.46
C11orf54-204ENST00000527003 FHOD3Q2V2M9 1422 aa5.92□□□□□ -1.46
C11orf54-204ENST00000527003 CCNYL3P0C7X3 344 aa5.92□□□□□ -1.46
C11orf54-204ENST00000527003 WDR4P57081 412 aaKnown RBP5.92□□□□□ -1.46
C11orf54-204ENST00000527003 SHROOM2Q13796 1616 aa5.92□□□□□ -1.46
C11orf54-204ENST00000527003 CASKIN1Q8WXD9 1431 aa5.91□□□□□ -1.46
C11orf54-204ENST00000527003 MAN1A2O60476 641 aa5.91□□□□□ -1.46
C11orf54-204ENST00000527003 PPFIA3O75145 1194 aa5.91□□□□□ -1.46
C11orf54-204ENST00000527003 MS4A1P11836 297 aa5.91□□□□□ -1.46
C11orf54-204ENST00000527003 VARSP26640 1264 aaKnown RBP5.91□□□□□ -1.46
C11orf54-204ENST00000527003 KRI1Q8N9T8 703 aaKnown RBP5.91□□□□□ -1.46
C11orf54-204ENST00000527003 SYMPKQ92797 1274 aaKnown RBP5.91□□□□□ -1.46
C11orf54-204ENST00000527003 UNC93B1Q9H1C4 597 aa5.91□□□□□ -1.46
C11orf54-204ENST00000527003 CDK11AQ9UQ88 783 aaPredicted RBP5.91□□□□□ -1.46
C11orf54-204ENST00000527003 KIAA0556O60303 1618 aa5.9□□□□□ -1.46
C11orf54-204ENST00000527003 IGHA1P01876 353 aa5.9□□□□□ -1.46
C11orf54-204ENST00000527003 GUCA2AQ02747 115 aa5.9□□□□□ -1.46
C11orf54-204ENST00000527003 KLF16Q9BXK1 252 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-204ENST00000527003 GPCPD1Q9NPB8 672 aa5.9□□□□□ -1.46
C11orf54-204ENST00000527003 ADAMTS8Q9UP79 889 aa5.9□□□□□ -1.46
C11orf54-204ENST00000527003 FYCO1Q9BQS8 1478 aa5.9□□□□□ -1.47
C11orf54-204ENST00000527003 PTPRNQ16849 979 aa5.89□□□□□ -1.47
C11orf54-204ENST00000527003 ZNF511Q8NB15 262 aa5.89□□□□□ -1.47
C11orf54-204ENST00000527003 FAM217BQ9NTX9 383 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-204ENST00000527003 EVA1BQ9NVM1 165 aa5.89□□□□□ -1.47
C11orf54-204ENST00000527003 ATP1B4Q9UN42 357 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-204ENST00000527003 DNMT3AQ9Y6K1 912 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-204ENST00000527003 UACAQ9BZF9 1416 aa5.89□□□□□ -1.47
C11orf54-204ENST00000527003 MAP3K1Q13233 1512 aa5.89□□□□□ -1.47
C11orf54-204ENST00000527003 CLCN1P35523 988 aa5.88□□□□□ -1.47
C11orf54-204ENST00000527003 TTLL12Q14166 644 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-204ENST00000527003 BAP1Q92560 729 aa5.88□□□□□ -1.47
C11orf54-204ENST00000527003 CCDC18Q5T9S5 1454 aa5.88□□□□□ -1.47
C11orf54-204ENST00000527003 KRT76Q01546 638 aa5.87□□□□□ -1.47
C11orf54-204ENST00000527003 AMHR2Q16671 573 aa5.87□□□□□ -1.47
C11orf54-204ENST00000527003 LINC01559Q495D7 138 aa5.87□□□□□ -1.47
C11orf54-204ENST00000527003 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
C11orf54-204ENST00000527003 BCANQ96GW7 911 aa5.87□□□□□ -1.47
C11orf54-204ENST00000527003 TTBK1Q5TCY1 1321 aaPredicted RBP5.87□□□□□ -1.47
C11orf54-204ENST00000527003 UHRF1BP1LA0JNW5 1464 aa5.87□□□□□ -1.47
C11orf54-204ENST00000527003 PLEKHD1A6NEE1 506 aa5.86□□□□□ -1.47
C11orf54-204ENST00000527003 TRIM66O15016 1216 aa5.86□□□□□ -1.47
C11orf54-204ENST00000527003 FOXK2Q01167 660 aa5.86□□□□□ -1.47
C11orf54-204ENST00000527003 KCNH2Q12809 1159 aa5.86□□□□□ -1.47
C11orf54-204ENST00000527003 C6orf118Q5T5N4 469 aa5.86□□□□□ -1.47
C11orf54-204ENST00000527003 SLC24A3Q9HC58 644 aa5.86□□□□□ -1.47
C11orf54-204ENST00000527003 ARHGEF11O15085 1522 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 PLB1Q6P1J6 1458 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 C6orf229H3BNL8 230 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 UPP2O95045 317 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
C11orf54-204ENST00000527003 PARP9Q8IXQ6 854 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 FAM174AQ8TBP5 190 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 CNTNAP3BQ96NU0 1288 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 CDK15Q96Q40 435 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 CNTNAP3Q9BZ76 1288 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 ZFAND3Q9H8U3 227 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 HECW1Q76N89 1606 aa5.85□□□□□ -1.47
C11orf54-204ENST00000527003 ABCA8O94911 1581 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 EPRSP07814 1512 aaKnown RBP5.84□□□□□ -1.47
C11orf54-204ENST00000527003 NUP153P49790 1475 aaKnown RBP5.84□□□□□ -1.47
C11orf54-204ENST00000527003 MTUS2Q5JR59 1369 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 ZIC2O95409 532 aaPredicted RBP5.84□□□□□ -1.47
C11orf54-204ENST00000527003 FDX1P10109 184 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 SSTR3P32745 418 aaPredicted RBP5.84□□□□□ -1.47
C11orf54-204ENST00000527003 CYB5RLQ6IPT4 315 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 NUTM1Q86Y26 1132 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 ITPKCQ96DU7 683 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 AK7Q96M32 723 aa5.84□□□□□ -1.47
C11orf54-204ENST00000527003 ABCC2Q92887 1545 aa5.84□□□□□ -1.48
C11orf54-204ENST00000527003 SOS2Q07890 1332 aaPredicted RBP5.83□□□□□ -1.48
C11orf54-204ENST00000527003 BMP2P12643 396 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 NR5A1Q13285 461 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 XP32Q5T750 250 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 ZNF385CQ66K41 422 aaPredicted RBP5.83□□□□□ -1.48
C11orf54-204ENST00000527003 KANK3Q6NY19 840 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 LINC00528Q8N1L1 170 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 SVOPQ8N4V2 548 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 MEIOBQ8N635 442 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 DNMT3LQ9UJW3 386 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 PCDHGC3Q9UN70 934 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 RAPGEF6Q8TEU7 1601 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 ERCC6L2Q5T890 1561 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 KDM5BQ9UGL1 1544 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 ATP10BO94823 1461 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 LRRC9Q6ZRR7 1453 aa5.83□□□□□ -1.48
C11orf54-204ENST00000527003 PCF11O94913 1555 aaKnown RBP5.82□□□□□ -1.48
C11orf54-204ENST00000527003 IRS1P35568 1242 aa5.82□□□□□ -1.48
C11orf54-204ENST00000527003 KANK4Q5T7N3 995 aaPredicted RBP5.82□□□□□ -1.48
C11orf54-204ENST00000527003 DESI1Q6ICB0 168 aa5.82□□□□□ -1.48
C11orf54-204ENST00000527003 GPR161Q8N6U8 529 aaKnown RBP5.82□□□□□ -1.48
C11orf54-204ENST00000527003 COL25A1Q9BXS0 654 aaPredicted RBP5.82□□□□□ -1.48
C11orf54-204ENST00000527003 TROQ12816 1431 aaPredicted RBP5.82□□□□□ -1.48
C11orf54-204ENST00000527003 TIAM1Q13009 1591 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms