RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
C11orf54-204ENST00000527003 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
C11orf54-204ENST00000527003 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
C11orf54-204ENST00000527003 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
C11orf54-204ENST00000527003 FOXD1Q16676 465 aa14.34□□□□□ -0.11
C11orf54-204ENST00000527003 POTEDQ86YR6 584 aa13.79□□□□□ -0.2
C11orf54-204ENST00000527003 MSH5O43196 834 aa13.6□□□□□ -0.23
C11orf54-204ENST00000527003 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-204ENST00000527003 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
C11orf54-204ENST00000527003 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
C11orf54-204ENST00000527003 ADRA2BP18089 450 aa13.07□□□□□ -0.32
C11orf54-204ENST00000527003 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
C11orf54-204ENST00000527003 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-204ENST00000527003 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
C11orf54-204ENST00000527003 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
C11orf54-204ENST00000527003 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
C11orf54-204ENST00000527003 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-204ENST00000527003 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
C11orf54-204ENST00000527003 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
C11orf54-204ENST00000527003 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
C11orf54-204ENST00000527003 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
C11orf54-204ENST00000527003 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
C11orf54-204ENST00000527003 DNAJC5BQ9UF47 199 aa11.29□□□□□ -0.6
C11orf54-204ENST00000527003 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
C11orf54-204ENST00000527003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
C11orf54-204ENST00000527003 NPM3O75607 178 aaKnown RBP10.82□□□□□ -0.68
C11orf54-204ENST00000527003 POTEHQ6S545 545 aa10.76□□□□□ -0.69
C11orf54-204ENST00000527003 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
C11orf54-204ENST00000527003 DSG3P32926 999 aa10.7□□□□□ -0.7
C11orf54-204ENST00000527003 CAPN15O75808 1086 aa10.67□□□□□ -0.7
C11orf54-204ENST00000527003 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
C11orf54-204ENST00000527003 APLP2Q06481 763 aa10.46□□□□□ -0.73
C11orf54-204ENST00000527003 ZNF219Q9P2Y4 722 aaPredicted RBP10.43□□□□□ -0.74
C11orf54-204ENST00000527003 SLC4A2P04920 1241 aa10.42□□□□□ -0.74
C11orf54-204ENST00000527003 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
C11orf54-204ENST00000527003 ABCB7O75027 752 aa10.38□□□□□ -0.75
C11orf54-204ENST00000527003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
C11orf54-204ENST00000527003 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
C11orf54-204ENST00000527003 KCNA4P22459 653 aa10.31□□□□□ -0.76
C11orf54-204ENST00000527003 SAMD1Q6SPF0 538 aaPredicted RBP10.29□□□□□ -0.76
C11orf54-204ENST00000527003 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
C11orf54-204ENST00000527003 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
C11orf54-204ENST00000527003 POLA2Q14181 598 aa10.06□□□□□ -0.8
C11orf54-204ENST00000527003 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
C11orf54-204ENST00000527003 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
C11orf54-204ENST00000527003 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
C11orf54-204ENST00000527003 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
C11orf54-204ENST00000527003 REM2Q8IYK8 340 aaPredicted RBP9.82□□□□□ -0.84
C11orf54-204ENST00000527003 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
C11orf54-204ENST00000527003 ATF5Q9Y2D1 282 aaPredicted RBP9.79□□□□□ -0.84
C11orf54-204ENST00000527003 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
C11orf54-204ENST00000527003 FOXD4L1Q9NU39 408 aa9.75□□□□□ -0.85
C11orf54-204ENST00000527003 HAX1O00165 279 aa9.72□□□□□ -0.85
C11orf54-204ENST00000527003 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
C11orf54-204ENST00000527003 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
C11orf54-204ENST00000527003 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
C11orf54-204ENST00000527003 SPDYE2BA6NHP3 402 aa9.55□□□□□ -0.88
C11orf54-204ENST00000527003 SPDYE6P0CI01 402 aa9.55□□□□□ -0.88
C11orf54-204ENST00000527003 SPDYE2Q495Y8 402 aa9.55□□□□□ -0.88
C11orf54-204ENST00000527003 EVX2Q03828 476 aa9.53□□□□□ -0.88
C11orf54-204ENST00000527003 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
C11orf54-204ENST00000527003 FBLN2P98095 1184 aa9.48□□□□□ -0.89
C11orf54-204ENST00000527003 ZBTB22O15209 634 aa9.47□□□□□ -0.89
C11orf54-204ENST00000527003 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.9
C11orf54-204ENST00000527003 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
C11orf54-204ENST00000527003 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
C11orf54-204ENST00000527003 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
C11orf54-204ENST00000527003 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
C11orf54-204ENST00000527003 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
C11orf54-204ENST00000527003 GABBR2O75899 941 aa9.33□□□□□ -0.92
C11orf54-204ENST00000527003 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-204ENST00000527003 LHX8Q68G74 356 aa9.3□□□□□ -0.92
C11orf54-204ENST00000527003 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
C11orf54-204ENST00000527003 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
C11orf54-204ENST00000527003 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
C11orf54-204ENST00000527003 CLCN6P51797 869 aa9.16□□□□□ -0.94
C11orf54-204ENST00000527003 CD44P16070 742 aaKnown RBP9.15□□□□□ -0.94
C11orf54-204ENST00000527003 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-204ENST00000527003 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
C11orf54-204ENST00000527003 DCBLD2Q96PD2 775 aa9.04□□□□□ -0.96
C11orf54-204ENST00000527003 ZNF579Q8NAF0 562 aaKnown RBP9.01□□□□□ -0.97
C11orf54-204ENST00000527003 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
C11orf54-204ENST00000527003 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
C11orf54-204ENST00000527003 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
C11orf54-204ENST00000527003 CREBZFQ9NS37 354 aa8.91□□□□□ -0.98
C11orf54-204ENST00000527003 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
C11orf54-204ENST00000527003 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
C11orf54-204ENST00000527003 CSRNP3Q8WYN3 585 aa8.88□□□□□ -0.99
C11orf54-204ENST00000527003 OTUD5Q96G74 571 aa8.86□□□□□ -0.99
C11orf54-204ENST00000527003 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-204ENST00000527003 POTEB2H3BUK9 544 aa8.81□□□□□ -1
C11orf54-204ENST00000527003 PHF12Q96QT6 1004 aa8.79□□□□□ -1
C11orf54-204ENST00000527003 POTEMA6NI47 508 aa8.77□□□□□ -1.01
C11orf54-204ENST00000527003 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
C11orf54-204ENST00000527003 SPDYE4A6NLX3 237 aa8.74□□□□□ -1.01
C11orf54-204ENST00000527003 NISCHQ9Y2I1 1504 aa8.74□□□□□ -1.01
C11orf54-204ENST00000527003 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
C11orf54-204ENST00000527003 PELP1Q8IZL8 1130 aaKnown RBP8.73□□□□□ -1.01
C11orf54-204ENST00000527003 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
C11orf54-204ENST00000527003 ASTLQ6HA08 431 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms