RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TRPM2O94759 1503 aa13.83□□□□□ -0.2
SNF8-211ENST00000512243 RNF40O75150 1001 aa13.82□□□□□ -0.2
SNF8-211ENST00000512243 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
SNF8-211ENST00000512243 TNRQ92752 1358 aa13.82□□□□□ -0.2
SNF8-211ENST00000512243 ZNF142P52746 1687 aaPredicted RBP13.82□□□□□ -0.2
SNF8-211ENST00000512243 NOS1P29475 1434 aa13.81□□□□□ -0.2
SNF8-211ENST00000512243 FCHSD2O94868 740 aa13.81□□□□□ -0.2
SNF8-211ENST00000512243 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
SNF8-211ENST00000512243 KIF1BO60333 1816 aa13.8□□□□□ -0.2
SNF8-211ENST00000512243 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
SNF8-211ENST00000512243 DHX57Q6P158 1386 aaKnown RBP13.8□□□□□ -0.2
SNF8-211ENST00000512243 PTPRTO14522 1441 aa13.8□□□□□ -0.2
SNF8-211ENST00000512243 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
SNF8-211ENST00000512243 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
SNF8-211ENST00000512243 NLRP1Q9C000 1473 aa13.79□□□□□ -0.2
SNF8-211ENST00000512243 PPP4CP60510 307 aa13.78□□□□□ -0.2
SNF8-211ENST00000512243 EYA1Q99502 592 aa13.78□□□□□ -0.2
SNF8-211ENST00000512243 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
SNF8-211ENST00000512243 CEP170BQ9Y4F5 1589 aaPredicted RBP13.78□□□□□ -0.2
SNF8-211ENST00000512243 MYO5BQ9ULV0 1848 aa13.78□□□□□ -0.2
SNF8-211ENST00000512243 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
SNF8-211ENST00000512243 NYAP1Q6ZVC0 841 aa13.77□□□□□ -0.21
SNF8-211ENST00000512243 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.21
SNF8-211ENST00000512243 KDM5AP29375 1690 aaKnown RBP13.76□□□□□ -0.21
SNF8-211ENST00000512243 ADGRB3O60242 1522 aa13.76□□□□□ -0.21
SNF8-211ENST00000512243 HDGFP51858 240 aaKnown RBP13.76□□□□□ -0.21
SNF8-211ENST00000512243 ADGRG1Q9Y653 693 aa13.76□□□□□ -0.21
SNF8-211ENST00000512243 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
SNF8-211ENST00000512243 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
SNF8-211ENST00000512243 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
SNF8-211ENST00000512243 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
SNF8-211ENST00000512243 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
SNF8-211ENST00000512243 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
SNF8-211ENST00000512243 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
SNF8-211ENST00000512243 GPR37O15354 613 aa13.72□□□□□ -0.21
SNF8-211ENST00000512243 HIC1Q14526 733 aa13.72□□□□□ -0.21
SNF8-211ENST00000512243 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
SNF8-211ENST00000512243 FECHP22830 423 aa13.71□□□□□ -0.21
SNF8-211ENST00000512243 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
SNF8-211ENST00000512243 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
SNF8-211ENST00000512243 DNAJB2P25686 324 aa13.69□□□□□ -0.22
SNF8-211ENST00000512243 IDI1Q13907 227 aa13.69□□□□□ -0.22
SNF8-211ENST00000512243 NEURL4Q96JN8 1562 aa13.69□□□□□ -0.22
SNF8-211ENST00000512243 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
SNF8-211ENST00000512243 GNPATO15228 680 aa13.68□□□□□ -0.22
SNF8-211ENST00000512243 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
SNF8-211ENST00000512243 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
SNF8-211ENST00000512243 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
SNF8-211ENST00000512243 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
SNF8-211ENST00000512243 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
SNF8-211ENST00000512243 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
SNF8-211ENST00000512243 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
SNF8-211ENST00000512243 PPLO60437 1756 aa13.66□□□□□ -0.22
SNF8-211ENST00000512243 APLP1P51693 650 aa13.66□□□□□ -0.22
SNF8-211ENST00000512243 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
SNF8-211ENST00000512243 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
SNF8-211ENST00000512243 SLIT1O75093 1534 aa13.64□□□□□ -0.23
SNF8-211ENST00000512243 KCNC4Q03721 635 aa13.64□□□□□ -0.23
SNF8-211ENST00000512243 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
SNF8-211ENST00000512243 A0A0G2JS52 829 aa13.63□□□□□ -0.23
SNF8-211ENST00000512243 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
SNF8-211ENST00000512243 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
SNF8-211ENST00000512243 PXYLP1Q8TE99 480 aa13.63□□□□□ -0.23
SNF8-211ENST00000512243 NEXMIFQ5QGS0 1516 aa13.63□□□□□ -0.23
SNF8-211ENST00000512243 ARHGAP23Q9P227 1491 aa13.62□□□□□ -0.23
SNF8-211ENST00000512243 RIMS2Q9UQ26 1411 aa13.62□□□□□ -0.23
SNF8-211ENST00000512243 TMEM2Q9UHN6 1383 aa13.61□□□□□ -0.23
SNF8-211ENST00000512243 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
SNF8-211ENST00000512243 OATP04181 439 aa13.61□□□□□ -0.23
SNF8-211ENST00000512243 NEUROD1Q13562 356 aa13.61□□□□□ -0.23
SNF8-211ENST00000512243 METTL3Q86U44 580 aaKnown RBP13.61□□□□□ -0.23
SNF8-211ENST00000512243 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
SNF8-211ENST00000512243 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
SNF8-211ENST00000512243 ZFYVE9O95405 1425 aa13.6□□□□□ -0.23
SNF8-211ENST00000512243 MTRQ99707 1265 aa13.6□□□□□ -0.23
SNF8-211ENST00000512243 STRCQ7RTU9 1775 aa13.6□□□□□ -0.23
SNF8-211ENST00000512243 HSPA2P54652 639 aa13.59□□□□□ -0.23
SNF8-211ENST00000512243 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
SNF8-211ENST00000512243 TJAP1Q5JTD0 557 aa13.59□□□□□ -0.23
SNF8-211ENST00000512243 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
SNF8-211ENST00000512243 IQGAP1P46940 1657 aa13.59□□□□□ -0.23
SNF8-211ENST00000512243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
SNF8-211ENST00000512243 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
SNF8-211ENST00000512243 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
SNF8-211ENST00000512243 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
SNF8-211ENST00000512243 MYOM2P54296 1465 aa13.57□□□□□ -0.24
SNF8-211ENST00000512243 PPP1R15AO75807 674 aaPredicted RBP13.57□□□□□ -0.24
SNF8-211ENST00000512243 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNF8-211ENST00000512243 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
SNF8-211ENST00000512243 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
SNF8-211ENST00000512243 COPS2P61201 443 aa13.55□□□□□ -0.24
SNF8-211ENST00000512243 TXNDC2Q86VQ3 553 aa13.55□□□□□ -0.24
SNF8-211ENST00000512243 ZNF516Q92618 1163 aa13.55□□□□□ -0.24
SNF8-211ENST00000512243 IL21Q9HBE4 155 aa13.54□□□□□ -0.24
SNF8-211ENST00000512243 PLEKHG1Q9ULL1 1385 aa13.54□□□□□ -0.24
SNF8-211ENST00000512243 MED14O60244 1454 aa13.54□□□□□ -0.24
SNF8-211ENST00000512243 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
SNF8-211ENST00000512243 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
SNF8-211ENST00000512243 LAMC1P11047 1609 aa13.53□□□□□ -0.24
SNF8-211ENST00000512243 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms