RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 FYCO1Q9BQS8 1478 aa7.23□□□□□ -1.25
CMSS1-209ENST00000497345 PTPRGP23470 1445 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 SIAH2O43255 324 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 ALDH1A1P00352 501 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 SH3BP2P78314 561 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 UNC93B1Q9H1C4 597 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 SLC24A3Q9HC58 644 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 PLB1Q6P1J6 1458 aa7.22□□□□□ -1.25
CMSS1-209ENST00000497345 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
CMSS1-209ENST00000497345 LRRIQ1Q96JM4 1722 aa7.21□□□□□ -1.25
CMSS1-209ENST00000497345 C11orf95C9JLR9 678 aaPredicted RBP7.21□□□□□ -1.26
CMSS1-209ENST00000497345 HRCP23327 699 aa7.21□□□□□ -1.26
CMSS1-209ENST00000497345 BAP1Q92560 729 aa7.21□□□□□ -1.26
CMSS1-209ENST00000497345 CLASP1Q7Z460 1538 aa7.21□□□□□ -1.26
CMSS1-209ENST00000497345 MTUS2Q5JR59 1369 aa7.2□□□□□ -1.26
CMSS1-209ENST00000497345 HECW1Q76N89 1606 aa7.2□□□□□ -1.26
CMSS1-209ENST00000497345 LRRC9Q6ZRR7 1453 aa7.2□□□□□ -1.26
CMSS1-209ENST00000497345 FAM50AQ14320 339 aaKnown RBP7.2□□□□□ -1.26
CMSS1-209ENST00000497345 PRPF38BQ5VTL8 546 aaKnown RBP7.2□□□□□ -1.26
CMSS1-209ENST00000497345 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
CMSS1-209ENST00000497345 ZBTB3Q9H5J0 574 aa7.2□□□□□ -1.26
CMSS1-209ENST00000497345 ATP13A2Q9NQ11 1180 aa7.2□□□□□ -1.26
CMSS1-209ENST00000497345 RAPGEF6Q8TEU7 1601 aa7.19□□□□□ -1.26
CMSS1-209ENST00000497345 CFAP43Q8NDM7 1665 aa7.19□□□□□ -1.26
CMSS1-209ENST00000497345 CFAP99D6REC4 459 aa7.19□□□□□ -1.26
CMSS1-209ENST00000497345 EPRSP07814 1512 aaKnown RBP7.18□□□□□ -1.26
CMSS1-209ENST00000497345 CTHP32929 405 aa7.18□□□□□ -1.26
CMSS1-209ENST00000497345 LINC01559Q495D7 138 aa7.18□□□□□ -1.26
CMSS1-209ENST00000497345 CABLES1Q8TDN4 633 aa7.18□□□□□ -1.26
CMSS1-209ENST00000497345 SHROOM2Q13796 1616 aa7.18□□□□□ -1.26
CMSS1-209ENST00000497345 NUP153P49790 1475 aaKnown RBP7.17□□□□□ -1.26
CMSS1-209ENST00000497345 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 MYSM1Q5VVJ2 828 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 TREML4Q6UXN2 200 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 LIMD1Q9UGP4 676 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 WASF2Q9Y6W5 498 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 PHLDB1Q86UU1 1377 aa7.17□□□□□ -1.26
CMSS1-209ENST00000497345 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
CMSS1-209ENST00000497345 TUSC1Q2TAM9 212 aa7.16□□□□□ -1.26
CMSS1-209ENST00000497345 SENP2Q9HC62 589 aa7.16□□□□□ -1.26
CMSS1-209ENST00000497345 CCDC18Q5T9S5 1454 aa7.16□□□□□ -1.26
CMSS1-209ENST00000497345 MAP3K1Q13233 1512 aa7.16□□□□□ -1.26
CMSS1-209ENST00000497345 MAGI3Q5TCQ9 1506 aa7.16□□□□□ -1.26
CMSS1-209ENST00000497345 PLEKHD1A6NEE1 506 aa7.15□□□□□ -1.26
CMSS1-209ENST00000497345 NUTM2BA6NNL0 878 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-209ENST00000497345 NUTM2EB1AL46 878 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-209ENST00000497345 LILRB3O75022 631 aa7.15□□□□□ -1.26
CMSS1-209ENST00000497345 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-209ENST00000497345 NUTM2DQ5VT03 806 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-209ENST00000497345 NUTM2AQ8IVF1 878 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-209ENST00000497345 CDK11AQ9UQ88 783 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-209ENST00000497345 UACAQ9BZF9 1416 aa7.15□□□□□ -1.27
CMSS1-209ENST00000497345 ABCA8O94911 1581 aa7.15□□□□□ -1.27
CMSS1-209ENST00000497345 PLEKHG3A1L390 1219 aa7.14□□□□□ -1.27
CMSS1-209ENST00000497345 F12P00748 615 aaPredicted RBP7.14□□□□□ -1.27
CMSS1-209ENST00000497345 SNRPBP14678 240 aaKnown RBP7.14□□□□□ -1.27
CMSS1-209ENST00000497345 QPCTQ16769 361 aa7.14□□□□□ -1.27
CMSS1-209ENST00000497345 MPNDQ8N594 471 aa7.14□□□□□ -1.27
CMSS1-209ENST00000497345 TRIM47Q96LD4 638 aa7.14□□□□□ -1.27
CMSS1-209ENST00000497345 MAP10Q9P2G4 905 aa7.14□□□□□ -1.27
CMSS1-209ENST00000497345 ZNF777Q9ULD5 760 aaPredicted RBP7.14□□□□□ -1.27
CMSS1-209ENST00000497345 EHBP1L1Q8N3D4 1523 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 ATP10BO94823 1461 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 NCOA2Q15596 1464 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 CCNB3Q8WWL7 1395 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 CAPN5O15484 640 aaPredicted RBP7.13□□□□□ -1.27
CMSS1-209ENST00000497345 PER1O15534 1290 aaPredicted RBP7.13□□□□□ -1.27
CMSS1-209ENST00000497345 CYB5RLQ6IPT4 315 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 TSC1Q92574 1164 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 KIFC2Q96AC6 838 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 RSPH6AQ9H0K4 717 aa7.13□□□□□ -1.27
CMSS1-209ENST00000497345 SUPT6HQ7KZ85 1726 aaKnown RBP7.13□□□□□ -1.27
CMSS1-209ENST00000497345 TLL2Q9Y6L7 1015 aa7.12□□□□□ -1.27
CMSS1-209ENST00000497345 WFS1O76024 890 aa7.11□□□□□ -1.27
CMSS1-209ENST00000497345 RTL5Q5HYW3 569 aaPredicted RBP7.11□□□□□ -1.27
CMSS1-209ENST00000497345 FAM174AQ8TBP5 190 aa7.11□□□□□ -1.27
CMSS1-209ENST00000497345 CCER1Q8TC90 406 aaPredicted RBP7.11□□□□□ -1.27
CMSS1-209ENST00000497345 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
CMSS1-209ENST00000497345 POLR3EQ9NVU0 708 aa7.11□□□□□ -1.27
CMSS1-209ENST00000497345 KIF14Q15058 1648 aa7.11□□□□□ -1.27
CMSS1-209ENST00000497345 ZNF644Q9H582 1327 aaPredicted RBP7.1□□□□□ -1.27
CMSS1-209ENST00000497345 CLK2P49760 499 aaKnown RBP7.1□□□□□ -1.27
CMSS1-209ENST00000497345 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
CMSS1-209ENST00000497345 CHIC2Q9UKJ5 165 aa7.1□□□□□ -1.27
CMSS1-209ENST00000497345 ABCC2Q92887 1545 aa7.1□□□□□ -1.27
CMSS1-209ENST00000497345 TROQ12816 1431 aaPredicted RBP7.1□□□□□ -1.27
CMSS1-209ENST00000497345 RRBP1Q9P2E9 1410 aaKnown RBP7.1□□□□□ -1.27
CMSS1-209ENST00000497345 NNTQ13423 1086 aa7.09□□□□□ -1.27
CMSS1-209ENST00000497345 TRIM46Q7Z4K8 759 aa7.09□□□□□ -1.27
CMSS1-209ENST00000497345 CFDP1Q9UEE9 299 aaPredicted RBP7.09□□□□□ -1.27
CMSS1-209ENST00000497345 MYOM3Q5VTT5 1437 aa7.09□□□□□ -1.28
CMSS1-209ENST00000497345 FGD6Q6ZV73 1430 aa7.09□□□□□ -1.28
CMSS1-209ENST00000497345 ZCCHC11Q5TAX3 1644 aaKnown RBP7.09□□□□□ -1.28
CMSS1-209ENST00000497345 ARHGEF11O15085 1522 aa7.08□□□□□ -1.28
CMSS1-209ENST00000497345 TERTO14746 1132 aaKnown RBP7.08□□□□□ -1.28
CMSS1-209ENST00000497345 BMP1P13497 986 aa7.08□□□□□ -1.28
CMSS1-209ENST00000497345 AGERQ15109 404 aa7.08□□□□□ -1.28
CMSS1-209ENST00000497345 BPHLQ86WA6 291 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms