RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
CMSS1-209ENST00000497345 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
CMSS1-209ENST00000497345 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
CMSS1-209ENST00000497345 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
CMSS1-209ENST00000497345 FOXD1Q16676 465 aa15.78■□□□□ 0.12
CMSS1-209ENST00000497345 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
CMSS1-209ENST00000497345 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
CMSS1-209ENST00000497345 ADRA2BP18089 450 aa14.83□□□□□ -0.04
CMSS1-209ENST00000497345 PIAS4Q8N2W9 510 aaPredicted RBP14.76□□□□□ -0.05
CMSS1-209ENST00000497345 MSH5O43196 834 aa14.71□□□□□ -0.05
CMSS1-209ENST00000497345 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
CMSS1-209ENST00000497345 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
CMSS1-209ENST00000497345 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
CMSS1-209ENST00000497345 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
CMSS1-209ENST00000497345 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
CMSS1-209ENST00000497345 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
CMSS1-209ENST00000497345 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
CMSS1-209ENST00000497345 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
CMSS1-209ENST00000497345 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
CMSS1-209ENST00000497345 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
CMSS1-209ENST00000497345 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
CMSS1-209ENST00000497345 KCNA4P22459 653 aa12.62□□□□□ -0.39
CMSS1-209ENST00000497345 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
CMSS1-209ENST00000497345 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
CMSS1-209ENST00000497345 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
CMSS1-209ENST00000497345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
CMSS1-209ENST00000497345 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
CMSS1-209ENST00000497345 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
CMSS1-209ENST00000497345 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
CMSS1-209ENST00000497345 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
CMSS1-209ENST00000497345 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
CMSS1-209ENST00000497345 CAPN15O75808 1086 aa11.92□□□□□ -0.5
CMSS1-209ENST00000497345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
CMSS1-209ENST00000497345 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
CMSS1-209ENST00000497345 APLP2Q06481 763 aa11.84□□□□□ -0.51
CMSS1-209ENST00000497345 DSG3P32926 999 aa11.82□□□□□ -0.52
CMSS1-209ENST00000497345 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-209ENST00000497345 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-209ENST00000497345 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-209ENST00000497345 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
CMSS1-209ENST00000497345 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
CMSS1-209ENST00000497345 ABCB7O75027 752 aa11.65□□□□□ -0.54
CMSS1-209ENST00000497345 ZBTB22O15209 634 aa11.6□□□□□ -0.55
CMSS1-209ENST00000497345 POLA2Q14181 598 aa11.5□□□□□ -0.57
CMSS1-209ENST00000497345 ATF5Q9Y2D1 282 aaPredicted RBP11.5□□□□□ -0.57
CMSS1-209ENST00000497345 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
CMSS1-209ENST00000497345 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
CMSS1-209ENST00000497345 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-209ENST00000497345 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
CMSS1-209ENST00000497345 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
CMSS1-209ENST00000497345 POTEHQ6S545 545 aa11.09□□□□□ -0.63
CMSS1-209ENST00000497345 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
CMSS1-209ENST00000497345 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
CMSS1-209ENST00000497345 FBLN2P98095 1184 aa11.04□□□□□ -0.64
CMSS1-209ENST00000497345 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-209ENST00000497345 CHRDL2Q6WN34 429 aa10.96□□□□□ -0.65
CMSS1-209ENST00000497345 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-209ENST00000497345 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
CMSS1-209ENST00000497345 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
CMSS1-209ENST00000497345 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
CMSS1-209ENST00000497345 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
CMSS1-209ENST00000497345 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
CMSS1-209ENST00000497345 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
CMSS1-209ENST00000497345 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
CMSS1-209ENST00000497345 FXR2P51116 673 aaKnown RBP eCLIP10.71□□□□□ -0.69
CMSS1-209ENST00000497345 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
CMSS1-209ENST00000497345 CLEC11AQ9Y240 323 aa10.68□□□□□ -0.7
CMSS1-209ENST00000497345 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
CMSS1-209ENST00000497345 NISCHQ9Y2I1 1504 aa10.66□□□□□ -0.7
CMSS1-209ENST00000497345 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
CMSS1-209ENST00000497345 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
CMSS1-209ENST00000497345 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
CMSS1-209ENST00000497345 HAX1O00165 279 aa10.52□□□□□ -0.73
CMSS1-209ENST00000497345 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
CMSS1-209ENST00000497345 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
CMSS1-209ENST00000497345 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
CMSS1-209ENST00000497345 EVX2Q03828 476 aa10.4□□□□□ -0.74
CMSS1-209ENST00000497345 C19orf67A6NJJ6 358 aa10.36□□□□□ -0.75
CMSS1-209ENST00000497345 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
CMSS1-209ENST00000497345 PROM2Q8N271 834 aa10.29□□□□□ -0.76
CMSS1-209ENST00000497345 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
CMSS1-209ENST00000497345 CD44P16070 742 aaKnown RBP10.21□□□□□ -0.77
CMSS1-209ENST00000497345 GABBR2O75899 941 aa10.18□□□□□ -0.78
CMSS1-209ENST00000497345 FKBP8Q14318 412 aa10.15□□□□□ -0.78
CMSS1-209ENST00000497345 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-209ENST00000497345 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
CMSS1-209ENST00000497345 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
CMSS1-209ENST00000497345 CLCN6P51797 869 aa10.08□□□□□ -0.8
CMSS1-209ENST00000497345 MIER1Q8N108 512 aa10.06□□□□□ -0.8
CMSS1-209ENST00000497345 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
CMSS1-209ENST00000497345 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-209ENST00000497345 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
CMSS1-209ENST00000497345 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
CMSS1-209ENST00000497345 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
CMSS1-209ENST00000497345 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
CMSS1-209ENST00000497345 GALR2O43603 387 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-209ENST00000497345 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
CMSS1-209ENST00000497345 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
CMSS1-209ENST00000497345 FBXO3Q9UK99 471 aa9.91□□□□□ -0.82
CMSS1-209ENST00000497345 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms