RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
TRA2B-216ENST00000493864 IL21Q9HBE4 155 aa9.92□□□□□ -0.82
TRA2B-216ENST00000493864 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
TRA2B-216ENST00000493864 COL17A1Q9UMD9 1497 aaPredicted RBP9.91□□□□□ -0.82
TRA2B-216ENST00000493864 FGD6Q6ZV73 1430 aa9.91□□□□□ -0.82
TRA2B-216ENST00000493864 TLL1O43897 1013 aa9.91□□□□□ -0.82
TRA2B-216ENST00000493864 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
TRA2B-216ENST00000493864 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
TRA2B-216ENST00000493864 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
TRA2B-216ENST00000493864 TTC37Q6PGP7 1564 aa9.91□□□□□ -0.82
TRA2B-216ENST00000493864 CD109Q6YHK3 1445 aa9.9□□□□□ -0.82
TRA2B-216ENST00000493864 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.82
TRA2B-216ENST00000493864 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
TRA2B-216ENST00000493864 AP1G2O75843 785 aa9.9□□□□□ -0.82
TRA2B-216ENST00000493864 PRR7Q8TB68 274 aa9.9□□□□□ -0.82
TRA2B-216ENST00000493864 SPSB2Q99619 263 aa9.9□□□□□ -0.82
TRA2B-216ENST00000493864 USB1Q9BQ65 265 aaKnown RBP9.9□□□□□ -0.82
TRA2B-216ENST00000493864 ITGAEP38570 1179 aa9.89□□□□□ -0.83
TRA2B-216ENST00000493864 TMEM259Q4ZIN3 620 aa9.89□□□□□ -0.83
TRA2B-216ENST00000493864 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
TRA2B-216ENST00000493864 TEX14Q8IWB6 1497 aa9.89□□□□□ -0.83
TRA2B-216ENST00000493864 PLCH2O75038 1416 aa9.89□□□□□ -0.83
TRA2B-216ENST00000493864 MIA2Q96PC5 1412 aa9.89□□□□□ -0.83
TRA2B-216ENST00000493864 CDC42BPAQ5VT25 1732 aa9.88□□□□□ -0.83
TRA2B-216ENST00000493864 HNRNPMP52272 730 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRA2B-216ENST00000493864 HELBQ8NG08 1087 aaPredicted RBP9.87□□□□□ -0.83
TRA2B-216ENST00000493864 CDC42BPBQ9Y5S2 1711 aa9.87□□□□□ -0.83
TRA2B-216ENST00000493864 ADH1BP00325 375 aa9.86□□□□□ -0.83
TRA2B-216ENST00000493864 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
TRA2B-216ENST00000493864 MYO5CQ9NQX4 1742 aa9.86□□□□□ -0.83
TRA2B-216ENST00000493864 PTPN23Q9H3S7 1636 aa9.85□□□□□ -0.83
TRA2B-216ENST00000493864 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
TRA2B-216ENST00000493864 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
TRA2B-216ENST00000493864 FAM160A2Q8N612 972 aaPredicted RBP9.85□□□□□ -0.83
TRA2B-216ENST00000493864 ITSN2Q9NZM3 1697 aa9.85□□□□□ -0.83
TRA2B-216ENST00000493864 ARHGAP5Q13017 1502 aa9.85□□□□□ -0.83
TRA2B-216ENST00000493864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRA2B-216ENST00000493864 PREX2Q70Z35 1606 aa9.85□□□□□ -0.83
TRA2B-216ENST00000493864 KCNC4Q03721 635 aa9.84□□□□□ -0.83
TRA2B-216ENST00000493864 BANK1Q8NDB2 785 aa9.84□□□□□ -0.83
TRA2B-216ENST00000493864 CAMSAP2Q08AD1 1489 aa9.84□□□□□ -0.83
TRA2B-216ENST00000493864 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
TRA2B-216ENST00000493864 USP17L8P0C7I0 530 aa9.83□□□□□ -0.84
TRA2B-216ENST00000493864 FLIIQ13045 1269 aa9.83□□□□□ -0.84
TRA2B-216ENST00000493864 MSS51Q4VC12 460 aa9.83□□□□□ -0.84
TRA2B-216ENST00000493864 PRDM9Q9NQV7 894 aa9.83□□□□□ -0.84
TRA2B-216ENST00000493864 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
TRA2B-216ENST00000493864 FRMPD1Q5SYB0 1578 aa9.83□□□□□ -0.84
TRA2B-216ENST00000493864 RICTORQ6R327 1708 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 JUNDP17535 347 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 MCM6Q14566 821 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 FANCAO15360 1455 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
TRA2B-216ENST00000493864 SAMD9LQ8IVG5 1584 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
TRA2B-216ENST00000493864 DESI1Q6ICB0 168 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 SLC6A16Q9GZN6 736 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 ABCC5O15440 1437 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 AKNAQ7Z591 1439 aa9.81□□□□□ -0.84
TRA2B-216ENST00000493864 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
TRA2B-216ENST00000493864 MBD5Q9P267 1494 aa9.8□□□□□ -0.84
TRA2B-216ENST00000493864 AFAP1Q8N556 730 aa9.8□□□□□ -0.84
TRA2B-216ENST00000493864 LRRN4Q8WUT4 740 aa9.8□□□□□ -0.84
TRA2B-216ENST00000493864 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
TRA2B-216ENST00000493864 PLEKHH2Q8IVE3 1493 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 NEO1Q92859 1461 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 DXOO77932 396 aaKnown RBP9.79□□□□□ -0.84
TRA2B-216ENST00000493864 S1PR4O95977 384 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 DAPK1P53355 1430 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 KIAA1107Q9UPP5 1409 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 TRAPPC8Q9Y2L5 1435 aa9.79□□□□□ -0.84
TRA2B-216ENST00000493864 RAPGEF3O95398 923 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 TSPY4P0CV99 314 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 TSPY10P0CW01 314 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 MMP16P51512 607 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 RRP7BPQ9NSQ0 103 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 ADGRL1O94910 1474 aa9.78□□□□□ -0.84
TRA2B-216ENST00000493864 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.84
TRA2B-216ENST00000493864 HMX1Q9NP08 348 aaPredicted RBP9.77□□□□□ -0.85
TRA2B-216ENST00000493864 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.85
TRA2B-216ENST00000493864 ABCC1P33527 1531 aa9.77□□□□□ -0.85
TRA2B-216ENST00000493864 SIGLEC1Q9BZZ2 1709 aa9.76□□□□□ -0.85
TRA2B-216ENST00000493864 ARHGEF5Q12774 1597 aa9.76□□□□□ -0.85
TRA2B-216ENST00000493864 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
TRA2B-216ENST00000493864 PTPRNQ16849 979 aa9.76□□□□□ -0.85
TRA2B-216ENST00000493864 CCDC141Q6ZP82 1450 aa9.75□□□□□ -0.85
TRA2B-216ENST00000493864 NUDT12Q9BQG2 462 aa9.75□□□□□ -0.85
TRA2B-216ENST00000493864 SPAG9O60271 1321 aaKnown RBP9.75□□□□□ -0.85
TRA2B-216ENST00000493864 C9orf84Q5VXU9 1444 aa9.74□□□□□ -0.85
TRA2B-216ENST00000493864 CCNYL3P0C7X3 344 aa9.74□□□□□ -0.85
TRA2B-216ENST00000493864 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
TRA2B-216ENST00000493864 DENND4BO75064 1496 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-216ENST00000493864 ARHGEF40Q8TER5 1519 aa9.73□□□□□ -0.85
TRA2B-216ENST00000493864 APBB1O00213 710 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms