RNA–Protein interactions for RNA: ENST00000476941.5

TRPC1-203, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPC1, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-203ENST00000476941 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.78■■□□□ 1.4
TRPC1-203ENST00000476941 MYO5BQ9ULV0 1848 aa23.78■■□□□ 1.4
TRPC1-203ENST00000476941 DDIT3P35638 169 aa23.78■■□□□ 1.4
TRPC1-203ENST00000476941 SOX12O15370 315 aa23.78■■□□□ 1.4
TRPC1-203ENST00000476941 FOXD4L1Q9NU39 408 aa23.78■■□□□ 1.4
TRPC1-203ENST00000476941 PRDM4Q9UKN5 801 aa23.78■■□□□ 1.4
TRPC1-203ENST00000476941 IPO8O15397 1037 aaKnown RBP23.77■■□□□ 1.4
TRPC1-203ENST00000476941 TSPYL6Q8N831 410 aa23.77■■□□□ 1.4
TRPC1-203ENST00000476941 CT47B1P0C2W7 299 aaPredicted RBP23.76■■□□□ 1.39
TRPC1-203ENST00000476941 R3HCC1Q9Y3T6 440 aaKnown RBP23.76■■□□□ 1.39
TRPC1-203ENST00000476941 FCHSD2O94868 740 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 ARHGAP31Q2M1Z3 1444 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 PPP1R9BQ96SB3 815 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 CD163L1Q9NR16 1453 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 DCTN1Q14203 1278 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 USP32Q8NFA0 1604 aa23.75■■□□□ 1.39
TRPC1-203ENST00000476941 FAM83GA6ND36 823 aa23.74■■□□□ 1.39
TRPC1-203ENST00000476941 RAB3GAP1Q15042 981 aa23.74■■□□□ 1.39
TRPC1-203ENST00000476941 SMC5Q8IY18 1101 aa23.74■■□□□ 1.39
TRPC1-203ENST00000476941 CIZ1Q9ULV3 898 aaPredicted RBP23.74■■□□□ 1.39
TRPC1-203ENST00000476941 NCOA3Q9Y6Q9 1424 aa23.74■■□□□ 1.39
TRPC1-203ENST00000476941 ARID3AQ99856 593 aa23.73■■□□□ 1.39
TRPC1-203ENST00000476941 ZBTB40Q9NUA8 1239 aa23.73■■□□□ 1.39
TRPC1-203ENST00000476941 KIF16BQ96L93 1317 aa23.73■■□□□ 1.39
TRPC1-203ENST00000476941 ANKRD45Q5TZF3 282 aa23.72■■□□□ 1.39
TRPC1-203ENST00000476941 PTMSP20962 102 aa23.71■■□□□ 1.39
TRPC1-203ENST00000476941 ZFYVE9O95405 1425 aa23.71■■□□□ 1.39
TRPC1-203ENST00000476941 COL3A1P02461 1466 aaPredicted RBP23.71■■□□□ 1.39
TRPC1-203ENST00000476941 HDAC1Q13547 482 aaPredicted RBP23.71■■□□□ 1.39
TRPC1-203ENST00000476941 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
TRPC1-203ENST00000476941 SNX21Q969T3 373 aa23.7■■□□□ 1.39
TRPC1-203ENST00000476941 MAP7D2Q96T17 732 aa23.7■■□□□ 1.38
TRPC1-203ENST00000476941 NFE2L2Q16236 605 aa23.69■■□□□ 1.38
TRPC1-203ENST00000476941 IL16Q14005 1332 aa23.69■■□□□ 1.38
TRPC1-203ENST00000476941 DDX49Q9Y6V7 483 aaKnown RBP23.68■■□□□ 1.38
TRPC1-203ENST00000476941 ADGRB2O60241 1585 aa23.68■■□□□ 1.38
TRPC1-203ENST00000476941 GOLGA6L22H0YM25 854 aa23.68■■□□□ 1.38
TRPC1-203ENST00000476941 TERF1P54274 439 aa23.68■■□□□ 1.38
TRPC1-203ENST00000476941 TMEM131LA2VDJ0 1609 aa23.67■■□□□ 1.38
TRPC1-203ENST00000476941 ALKQ9UM73 1620 aa23.67■■□□□ 1.38
TRPC1-203ENST00000476941 RBM25P49756 843 aaKnown RBP23.67■■□□□ 1.38
TRPC1-203ENST00000476941 NCBP3Q53F19 620 aaKnown RBP23.67■■□□□ 1.38
TRPC1-203ENST00000476941 MBIPQ9NS73 344 aa23.67■■□□□ 1.38
TRPC1-203ENST00000476941 NUDT16Q96DE0 195 aaKnown RBP23.66■■□□□ 1.38
TRPC1-203ENST00000476941 COG3Q96JB2 828 aa23.66■■□□□ 1.38
TRPC1-203ENST00000476941 WASLO00401 505 aaPredicted RBP23.66■■□□□ 1.38
TRPC1-203ENST00000476941 VAMP4O75379 141 aa23.66■■□□□ 1.38
TRPC1-203ENST00000476941 A0A0U1RQG5 324 aaPredicted RBP23.65■■□□□ 1.38
TRPC1-203ENST00000476941 SSFA2P28290 1259 aa23.65■■□□□ 1.38
TRPC1-203ENST00000476941 PREX1Q8TCU6 1659 aa23.64■■□□□ 1.38
TRPC1-203ENST00000476941 UQCRHLA0A096LP55 91 aa23.64■■□□□ 1.38
TRPC1-203ENST00000476941 UQCRHP07919 91 aa23.64■■□□□ 1.38
TRPC1-203ENST00000476941 XPCQ01831 940 aaPredicted RBP23.64■■□□□ 1.38
TRPC1-203ENST00000476941 CHD1LQ86WJ1 897 aa23.64■■□□□ 1.38
TRPC1-203ENST00000476941 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.38
TRPC1-203ENST00000476941 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.38
TRPC1-203ENST00000476941 PNPLA6Q8IY17 1366 aa23.64■■□□□ 1.37
TRPC1-203ENST00000476941 TWISTNBQ3B726 338 aaPredicted RBP23.63■■□□□ 1.37
TRPC1-203ENST00000476941 RIMS2Q9UQ26 1411 aa23.63■■□□□ 1.37
TRPC1-203ENST00000476941 ALDH1L2Q3SY69 923 aa23.63■■□□□ 1.37
TRPC1-203ENST00000476941 RICTORQ6R327 1708 aa23.63■■□□□ 1.37
TRPC1-203ENST00000476941 APBB1O00213 710 aa23.62■■□□□ 1.37
TRPC1-203ENST00000476941 IL13P35225 146 aa23.62■■□□□ 1.37
TRPC1-203ENST00000476941 LRRC7Q96NW7 1537 aa23.62■■□□□ 1.37
TRPC1-203ENST00000476941 GNAI1P63096 354 aa23.62■■□□□ 1.37
TRPC1-203ENST00000476941 KRT24Q2M2I5 525 aa23.62■■□□□ 1.37
TRPC1-203ENST00000476941 PPIP5K1Q6PFW1 1433 aa23.62■■□□□ 1.37
TRPC1-203ENST00000476941 CD2BP2O95400 341 aaKnown RBP23.61■■□□□ 1.37
TRPC1-203ENST00000476941 NCLP19338 710 aaKnown RBP23.61■■□□□ 1.37
TRPC1-203ENST00000476941 NUCB1Q02818 461 aa23.61■■□□□ 1.37
TRPC1-203ENST00000476941 AEBP1Q8IUX7 1158 aa23.61■■□□□ 1.37
TRPC1-203ENST00000476941 MRPL50Q8N5N7 158 aaKnown RBP23.61■■□□□ 1.37
TRPC1-203ENST00000476941 KLHL40Q2TBA0 621 aa23.61■■□□□ 1.37
TRPC1-203ENST00000476941 METP08581 1390 aa23.61■■□□□ 1.37
TRPC1-203ENST00000476941 ZBTB7BO15156 539 aaPredicted RBP23.6■■□□□ 1.37
TRPC1-203ENST00000476941 TSPOAP1O95153 1857 aa23.6■■□□□ 1.37
TRPC1-203ENST00000476941 K7ELQ4 463 aaPredicted RBP23.58■■□□□ 1.37
TRPC1-203ENST00000476941 SULT6B1Q6IMI4 303 aa23.58■■□□□ 1.36
TRPC1-203ENST00000476941 NOL7Q9UMY1 257 aaKnown RBP23.58■■□□□ 1.36
TRPC1-203ENST00000476941 CCDC61Q9Y6R9 512 aa23.58■■□□□ 1.36
TRPC1-203ENST00000476941 FAM135BQ49AJ0 1406 aa23.57■■□□□ 1.36
TRPC1-203ENST00000476941 BAG4O95429 457 aaKnown RBP23.57■■□□□ 1.36
TRPC1-203ENST00000476941 PRDM10Q9NQV6 1147 aa23.57■■□□□ 1.36
TRPC1-203ENST00000476941 CAVIN1Q6NZI2 390 aaKnown RBP23.56■■□□□ 1.36
TRPC1-203ENST00000476941 ZNF500O60304 480 aaPredicted RBP23.56■■□□□ 1.36
TRPC1-203ENST00000476941 MCM10Q7L590 875 aa23.56■■□□□ 1.36
TRPC1-203ENST00000476941 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
TRPC1-203ENST00000476941 HS1BP3Q53T59 392 aa23.55■■□□□ 1.36
TRPC1-203ENST00000476941 SMAP1Q8IYB5 467 aaPredicted RBP23.55■■□□□ 1.36
TRPC1-203ENST00000476941 GAS2L2Q8NHY3 880 aa23.55■■□□□ 1.36
TRPC1-203ENST00000476941 KIF2CQ99661 725 aa23.55■■□□□ 1.36
TRPC1-203ENST00000476941 IFT57Q9NWB7 429 aa23.55■■□□□ 1.36
TRPC1-203ENST00000476941 IBTKQ9P2D0 1353 aaPredicted RBP23.55■■□□□ 1.36
TRPC1-203ENST00000476941 A2ML1A8K2U0 1454 aa23.55■■□□□ 1.36
TRPC1-203ENST00000476941 MED14O60244 1454 aa23.54■■□□□ 1.36
TRPC1-203ENST00000476941 SIRT2Q8IXJ6 389 aa23.54■■□□□ 1.36
TRPC1-203ENST00000476941 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
TRPC1-203ENST00000476941 MCTP1Q6DN14 999 aa23.53■■□□□ 1.36
TRPC1-203ENST00000476941 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms