RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
SND1-208ENST00000470463 RRS1Q15050 365 aaKnown RBP14.34□□□□□ -0.11
SND1-208ENST00000470463 CDCA7LQ96GN5 454 aa14.34□□□□□ -0.11
SND1-208ENST00000470463 MST1RQ04912 1400 aa14.33□□□□□ -0.11
SND1-208ENST00000470463 CT47B1P0C2W7 299 aaPredicted RBP14.33□□□□□ -0.12
SND1-208ENST00000470463 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
SND1-208ENST00000470463 SLAIN2Q9P270 581 aa14.33□□□□□ -0.12
SND1-208ENST00000470463 AMPHP49418 695 aa14.32□□□□□ -0.12
SND1-208ENST00000470463 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
SND1-208ENST00000470463 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
SND1-208ENST00000470463 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
SND1-208ENST00000470463 PPP4R2Q9NY27 417 aa14.31□□□□□ -0.12
SND1-208ENST00000470463 MAP3K19Q56UN5 1328 aa14.31□□□□□ -0.12
SND1-208ENST00000470463 NPHP3Q7Z494 1330 aa14.31□□□□□ -0.12
SND1-208ENST00000470463 ARHGEF10O15013 1369 aa14.31□□□□□ -0.12
SND1-208ENST00000470463 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
SND1-208ENST00000470463 EIF4A2Q14240 407 aaKnown RBP14.3□□□□□ -0.12
SND1-208ENST00000470463 ZNF772Q68DY9 489 aaPredicted RBP14.3□□□□□ -0.12
SND1-208ENST00000470463 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 FBLN1P23142 703 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 RIPK4P57078 832 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 NEUROD2Q15784 382 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 ORAI2Q96SN7 254 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 JCADQ9P266 1359 aa14.29□□□□□ -0.12
SND1-208ENST00000470463 FOXO3O43524 673 aa14.28□□□□□ -0.12
SND1-208ENST00000470463 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.13
SND1-208ENST00000470463 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.13
SND1-208ENST00000470463 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
SND1-208ENST00000470463 USP19O94966 1318 aa14.26□□□□□ -0.13
SND1-208ENST00000470463 HOXC9P31274 260 aa14.26□□□□□ -0.13
SND1-208ENST00000470463 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
SND1-208ENST00000470463 SLIT3O75094 1523 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 KDRP35968 1356 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 SPATA31A6Q5VVP1 1343 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 RGPD1P0DJD0 1748 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
SND1-208ENST00000470463 MARF1Q9Y4F3 1742 aaKnown RBP14.25□□□□□ -0.13
SND1-208ENST00000470463 HMOX1P09601 288 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 IP6K1Q92551 441 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 ZNF428Q96B54 188 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
SND1-208ENST00000470463 SULT6B1Q6IMI4 303 aa14.24□□□□□ -0.13
SND1-208ENST00000470463 NFAT5O94916 1531 aa14.24□□□□□ -0.13
SND1-208ENST00000470463 SOX12O15370 315 aa14.23□□□□□ -0.13
SND1-208ENST00000470463 HAP1P54257 671 aaPredicted RBP14.23□□□□□ -0.13
SND1-208ENST00000470463 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
SND1-208ENST00000470463 GCP02774 474 aa14.22□□□□□ -0.13
SND1-208ENST00000470463 RXRBP28702 533 aa14.22□□□□□ -0.13
SND1-208ENST00000470463 GNAI1P63096 354 aa14.22□□□□□ -0.13
SND1-208ENST00000470463 NUTM2GQ5VZR2 741 aa14.22□□□□□ -0.13
SND1-208ENST00000470463 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
SND1-208ENST00000470463 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
SND1-208ENST00000470463 HTATSF1O43719 755 aaKnown RBP14.21□□□□□ -0.13
SND1-208ENST00000470463 IFT57Q9NWB7 429 aa14.21□□□□□ -0.13
SND1-208ENST00000470463 TNS3Q68CZ2 1445 aa14.21□□□□□ -0.13
SND1-208ENST00000470463 ABCC6O95255 1503 aa14.2□□□□□ -0.14
SND1-208ENST00000470463 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
SND1-208ENST00000470463 XIRP1Q702N8 1843 aaKnown RBP14.2□□□□□ -0.14
SND1-208ENST00000470463 MS4A1P11836 297 aa14.2□□□□□ -0.14
SND1-208ENST00000470463 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
SND1-208ENST00000470463 AAMPQ13685 434 aa14.2□□□□□ -0.14
SND1-208ENST00000470463 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
SND1-208ENST00000470463 PHACTR3Q96KR7 559 aa14.2□□□□□ -0.14
SND1-208ENST00000470463 LTN1O94822 1766 aa14.19□□□□□ -0.14
SND1-208ENST00000470463 LMOD2Q6P5Q4 547 aa14.19□□□□□ -0.14
SND1-208ENST00000470463 EYA1Q99502 592 aa14.19□□□□□ -0.14
SND1-208ENST00000470463 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
SND1-208ENST00000470463 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
SND1-208ENST00000470463 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
SND1-208ENST00000470463 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
SND1-208ENST00000470463 PLEKHG2Q9H7P9 1386 aa14.18□□□□□ -0.14
SND1-208ENST00000470463 SPATA31A3Q5VYP0 1347 aa14.17□□□□□ -0.14
SND1-208ENST00000470463 BRINP3Q76B58 766 aa14.17□□□□□ -0.14
SND1-208ENST00000470463 PXDNQ92626 1479 aa14.17□□□□□ -0.14
SND1-208ENST00000470463 RARSP54136 660 aaKnown RBP14.16□□□□□ -0.14
SND1-208ENST00000470463 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
SND1-208ENST00000470463 AEBP1Q8IUX7 1158 aa14.16□□□□□ -0.14
SND1-208ENST00000470463 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
SND1-208ENST00000470463 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.14
SND1-208ENST00000470463 ZNF853P0CG23 659 aa14.15□□□□□ -0.14
SND1-208ENST00000470463 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.14
SND1-208ENST00000470463 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.14
SND1-208ENST00000470463 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
SND1-208ENST00000470463 BABAM1Q9NWV8 329 aa14.14□□□□□ -0.15
SND1-208ENST00000470463 KIF16BQ96L93 1317 aa14.14□□□□□ -0.15
SND1-208ENST00000470463 CPDO75976 1380 aa14.13□□□□□ -0.15
SND1-208ENST00000470463 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
SND1-208ENST00000470463 BRPF1P55201 1214 aaPredicted RBP14.13□□□□□ -0.15
SND1-208ENST00000470463 EXOSC9Q06265 439 aaKnown RBP14.13□□□□□ -0.15
SND1-208ENST00000470463 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
SND1-208ENST00000470463 NCAPD2Q15021 1401 aa14.13□□□□□ -0.15
SND1-208ENST00000470463 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
SND1-208ENST00000470463 NUTM2BA6NNL0 878 aaPredicted RBP14.12□□□□□ -0.15
SND1-208ENST00000470463 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
SND1-208ENST00000470463 NUTM2EB1AL46 878 aaPredicted RBP14.12□□□□□ -0.15
SND1-208ENST00000470463 NUTM2AQ8IVF1 878 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms