RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
VARS2-205ENST00000469358 NFE2L2Q16236 605 aa15.08■□□□□ 0.01
VARS2-205ENST00000469358 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0
VARS2-205ENST00000469358 YEATS2Q9ULM3 1422 aa15.08■□□□□ 0
VARS2-205ENST00000469358 DDX11L8A8MPP1 907 aa15.08■□□□□ 0
VARS2-205ENST00000469358 GSPT1P15170 499 aaKnown RBP15.08■□□□□ 0
VARS2-205ENST00000469358 PNPLA6Q8IY17 1366 aa15.07■□□□□ 0
VARS2-205ENST00000469358 PIK3C2BO00750 1634 aa15.07■□□□□ 0
VARS2-205ENST00000469358 MRE11P49959 708 aa15.07■□□□□ 0
VARS2-205ENST00000469358 SNX21Q969T3 373 aa15.07■□□□□ 0
VARS2-205ENST00000469358 NCOA3Q9Y6Q9 1424 aa15.06■□□□□ 0
VARS2-205ENST00000469358 SMARCA5O60264 1052 aaPredicted RBP15.06■□□□□ 0
VARS2-205ENST00000469358 CHAMP1Q96JM3 812 aa15.06■□□□□ 0
VARS2-205ENST00000469358 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
VARS2-205ENST00000469358 RAB3GAP1Q15042 981 aa15.05■□□□□ 0
VARS2-205ENST00000469358 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
VARS2-205ENST00000469358 MYO5BQ9ULV0 1848 aa15.05■□□□□ -0
VARS2-205ENST00000469358 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
VARS2-205ENST00000469358 K7ELQ4 463 aaPredicted RBP15.04■□□□□ -0
VARS2-205ENST00000469358 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
VARS2-205ENST00000469358 SOX12O15370 315 aa15.04■□□□□ -0
VARS2-205ENST00000469358 PKP1Q13835 747 aa15.04■□□□□ -0
VARS2-205ENST00000469358 GCC1Q96CN9 775 aa15.04■□□□□ -0
VARS2-205ENST00000469358 IL13P35225 146 aa15.04■□□□□ -0
VARS2-205ENST00000469358 NUTM2FA1L443 756 aa15.03■□□□□ -0
VARS2-205ENST00000469358 MLECQ14165 292 aa15.03■□□□□ -0
VARS2-205ENST00000469358 GNAI1P63096 354 aa15.02■□□□□ -0
VARS2-205ENST00000469358 PLEKHM2Q8IWE5 1019 aa15.02■□□□□ -0
VARS2-205ENST00000469358 GBP4Q96PP9 640 aa15.02■□□□□ -0
VARS2-205ENST00000469358 ABCC4O15439 1325 aa15.02□□□□□ -0.01
VARS2-205ENST00000469358 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 MCM10Q7L590 875 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 MED14O60244 1454 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 CDC45O75419 566 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 ZNF853P0CG23 659 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 CLCN1P35523 988 aa15.01□□□□□ -0.01
VARS2-205ENST00000469358 ARHGEF40Q8TER5 1519 aa15□□□□□ -0.01
VARS2-205ENST00000469358 NCLP19338 710 aaKnown RBP15□□□□□ -0.01
VARS2-205ENST00000469358 FOXD4L5Q5VV16 416 aaPredicted RBP15□□□□□ -0.01
VARS2-205ENST00000469358 FOXD4L4Q8WXT5 416 aaPredicted RBP15□□□□□ -0.01
VARS2-205ENST00000469358 AK9Q5TCS8 1911 aa15□□□□□ -0.01
VARS2-205ENST00000469358 ESPNB1AK53 854 aa14.99□□□□□ -0.01
VARS2-205ENST00000469358 CFAP74Q9C0B2 1584 aa14.99□□□□□ -0.01
VARS2-205ENST00000469358 TSHZ3Q63HK5 1081 aa14.99□□□□□ -0.01
VARS2-205ENST00000469358 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
VARS2-205ENST00000469358 MCTP1Q6DN14 999 aa14.98□□□□□ -0.01
VARS2-205ENST00000469358 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
VARS2-205ENST00000469358 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
VARS2-205ENST00000469358 PTCH1Q13635 1447 aa14.98□□□□□ -0.01
VARS2-205ENST00000469358 DIP2CQ9Y2E4 1556 aa14.98□□□□□ -0.01
VARS2-205ENST00000469358 BRPF1P55201 1214 aaPredicted RBP14.98□□□□□ -0.01
VARS2-205ENST00000469358 ZGPATQ8N5A5 531 aaKnown RBP14.98□□□□□ -0.01
VARS2-205ENST00000469358 BAG4O95429 457 aaKnown RBP14.98□□□□□ -0.01
VARS2-205ENST00000469358 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
VARS2-205ENST00000469358 TRIM44Q96DX7 344 aaPredicted RBP14.97□□□□□ -0.01
VARS2-205ENST00000469358 MEIS3Q99687 375 aa14.97□□□□□ -0.01
VARS2-205ENST00000469358 SULT6B1Q6IMI4 303 aa14.97□□□□□ -0.01
VARS2-205ENST00000469358 ZFYVE9O95405 1425 aa14.97□□□□□ -0.01
VARS2-205ENST00000469358 ALKQ9UM73 1620 aa14.97□□□□□ -0.01
VARS2-205ENST00000469358 TTC22Q5TAA0 569 aa14.96□□□□□ -0.01
VARS2-205ENST00000469358 PIK3R4Q99570 1358 aa14.96□□□□□ -0.01
VARS2-205ENST00000469358 SDSP20132 328 aa14.96□□□□□ -0.01
VARS2-205ENST00000469358 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
VARS2-205ENST00000469358 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
VARS2-205ENST00000469358 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 COG3Q96JB2 828 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
VARS2-205ENST00000469358 F6X3S4 739 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 UBE2Q2Q8WVN8 375 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
VARS2-205ENST00000469358 CAVIN1Q6NZI2 390 aaKnown RBP14.95□□□□□ -0.02
VARS2-205ENST00000469358 SLC4A10Q6U841 1118 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
VARS2-205ENST00000469358 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
VARS2-205ENST00000469358 ARHGAP31Q2M1Z3 1444 aa14.94□□□□□ -0.02
VARS2-205ENST00000469358 RIMS2Q9UQ26 1411 aa14.94□□□□□ -0.02
VARS2-205ENST00000469358 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
VARS2-205ENST00000469358 RBM27Q9P2N5 1060 aaKnown RBP14.94□□□□□ -0.02
VARS2-205ENST00000469358 FOXO3O43524 673 aa14.94□□□□□ -0.02
VARS2-205ENST00000469358 NOL8Q76FK4 1167 aaKnown RBP14.94□□□□□ -0.02
VARS2-205ENST00000469358 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
VARS2-205ENST00000469358 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
VARS2-205ENST00000469358 ANKRD26Q9UPS8 1709 aa14.93□□□□□ -0.02
VARS2-205ENST00000469358 NASPP49321 788 aaPredicted RBP14.93□□□□□ -0.02
VARS2-205ENST00000469358 G2E3Q7L622 706 aa14.92□□□□□ -0.02
VARS2-205ENST00000469358 MSH6P52701 1360 aa14.92□□□□□ -0.02
VARS2-205ENST00000469358 CPS1P31327 1500 aa14.92□□□□□ -0.02
VARS2-205ENST00000469358 EIF4A2Q14240 407 aaKnown RBP14.92□□□□□ -0.02
VARS2-205ENST00000469358 HSP90AB2PQ58FF8 381 aa14.92□□□□□ -0.02
VARS2-205ENST00000469358 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
VARS2-205ENST00000469358 METP08581 1390 aa14.92□□□□□ -0.02
VARS2-205ENST00000469358 SKOR2Q2VWA4 1001 aaPredicted RBP14.91□□□□□ -0.02
VARS2-205ENST00000469358 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
VARS2-205ENST00000469358 CHMP4BQ9H444 224 aaKnown RBP14.91□□□□□ -0.02
VARS2-205ENST00000469358 KIF20BQ96Q89 1820 aa14.91□□□□□ -0.02
VARS2-205ENST00000469358 PRPF40AO75400 957 aaKnown RBP14.91□□□□□ -0.02
VARS2-205ENST00000469358 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 416.4 ms