RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PDE4CQ08493 712 aa22.55■■□□□ 1.2
SNAPC3-205ENST00000467062 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
SNAPC3-205ENST00000467062 MTERF4Q7Z6M4 381 aaKnown RBP22.55■■□□□ 1.2
SNAPC3-205ENST00000467062 WASLO00401 505 aaPredicted RBP22.53■■□□□ 1.2
SNAPC3-205ENST00000467062 RWDD1Q9H446 243 aaPredicted RBP22.53■■□□□ 1.2
SNAPC3-205ENST00000467062 TMEM57Q8N5G2 664 aa22.52■■□□□ 1.2
SNAPC3-205ENST00000467062 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
SNAPC3-205ENST00000467062 ZSCAN30Q86W11 494 aa22.52■■□□□ 1.2
SNAPC3-205ENST00000467062 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.19
SNAPC3-205ENST00000467062 FCHSD2O94868 740 aa22.51■■□□□ 1.19
SNAPC3-205ENST00000467062 CCDC173Q0VFZ6 552 aa22.51■■□□□ 1.19
SNAPC3-205ENST00000467062 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
SNAPC3-205ENST00000467062 DIP2BQ9P265 1576 aa22.51■■□□□ 1.19
SNAPC3-205ENST00000467062 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
SNAPC3-205ENST00000467062 ADGRB2O60241 1585 aa22.5■■□□□ 1.19
SNAPC3-205ENST00000467062 FAM13BQ9NYF5 915 aa22.49■■□□□ 1.19
SNAPC3-205ENST00000467062 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
SNAPC3-205ENST00000467062 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
SNAPC3-205ENST00000467062 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
SNAPC3-205ENST00000467062 ZMYM3Q14202 1370 aa22.49■■□□□ 1.19
SNAPC3-205ENST00000467062 TSPYL6Q8N831 410 aa22.48■■□□□ 1.19
SNAPC3-205ENST00000467062 MSNP26038 577 aaKnown RBP22.48■■□□□ 1.19
SNAPC3-205ENST00000467062 PPIP5K1Q6PFW1 1433 aa22.48■■□□□ 1.19
SNAPC3-205ENST00000467062 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
SNAPC3-205ENST00000467062 FAM83GA6ND36 823 aa22.47■■□□□ 1.19
SNAPC3-205ENST00000467062 SOX12O15370 315 aa22.47■■□□□ 1.19
SNAPC3-205ENST00000467062 NCLP19338 710 aaKnown RBP22.46■■□□□ 1.19
SNAPC3-205ENST00000467062 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
SNAPC3-205ENST00000467062 SPRYD3Q8NCJ5 442 aa22.46■■□□□ 1.19
SNAPC3-205ENST00000467062 PPP6R1Q9UPN7 881 aa22.46■■□□□ 1.19
SNAPC3-205ENST00000467062 ANP32BQ92688 251 aaKnown RBP22.45■■□□□ 1.19
SNAPC3-205ENST00000467062 PPP1R9BQ96SB3 815 aa22.45■■□□□ 1.19
SNAPC3-205ENST00000467062 CT47B1P0C2W7 299 aaPredicted RBP22.45■■□□□ 1.18
SNAPC3-205ENST00000467062 MED14O60244 1454 aa22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 IL13P35225 146 aa22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 CEBPAP49715 358 aaPredicted RBP22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 SKOR2Q2VWA4 1001 aaPredicted RBP22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 UTP14CQ5TAP6 766 aaKnown RBP22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 CCDC61Q9Y6R9 512 aa22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 PTMSP20962 102 aa22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 DDX19BQ9UMR2 479 aa22.44■■□□□ 1.18
SNAPC3-205ENST00000467062 IL16Q14005 1332 aa22.43■■□□□ 1.18
SNAPC3-205ENST00000467062 COG3Q96JB2 828 aa22.43■■□□□ 1.18
SNAPC3-205ENST00000467062 NFE2L2Q16236 605 aa22.43■■□□□ 1.18
SNAPC3-205ENST00000467062 C1orf115Q9H7X2 142 aa22.42■■□□□ 1.18
SNAPC3-205ENST00000467062 PRR36Q9H6K5 1346 aa22.42■■□□□ 1.18
SNAPC3-205ENST00000467062 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
SNAPC3-205ENST00000467062 GAS2L3Q86XJ1 694 aa22.41■■□□□ 1.18
SNAPC3-205ENST00000467062 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
SNAPC3-205ENST00000467062 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
SNAPC3-205ENST00000467062 ZBTB40Q9NUA8 1239 aa22.4■■□□□ 1.18
SNAPC3-205ENST00000467062 R3HCC1Q9Y3T6 440 aaKnown RBP22.4■■□□□ 1.18
SNAPC3-205ENST00000467062 AEBP1Q8IUX7 1158 aa22.39■■□□□ 1.17
SNAPC3-205ENST00000467062 MBIPQ9NS73 344 aa22.39■■□□□ 1.17
SNAPC3-205ENST00000467062 VAMP4O75379 141 aa22.39■■□□□ 1.17
SNAPC3-205ENST00000467062 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
SNAPC3-205ENST00000467062 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
SNAPC3-205ENST00000467062 FAM135BQ49AJ0 1406 aa22.38■■□□□ 1.17
SNAPC3-205ENST00000467062 AGLP35573 1532 aa22.38■■□□□ 1.17
SNAPC3-205ENST00000467062 DYNC1I1O14576 645 aa22.38■■□□□ 1.17
SNAPC3-205ENST00000467062 LTKP29376 864 aa22.38■■□□□ 1.17
SNAPC3-205ENST00000467062 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 CPS1P31327 1500 aa22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 DMTNQ08495 405 aa22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 GBP4Q96PP9 640 aa22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 LNPKQ9C0E8 428 aa22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 ZHX1Q9UKY1 873 aaPredicted RBP22.37■■□□□ 1.17
SNAPC3-205ENST00000467062 ATP7BP35670 1465 aa22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 HS1BP3Q53T59 392 aa22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 KIF16BQ96L93 1317 aa22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 ROBO2Q9HCK4 1378 aa22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 UQCRHLA0A096LP55 91 aa22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 UQCRHP07919 91 aa22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 NASPP49321 788 aaPredicted RBP22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 MFAP1P55081 439 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-205ENST00000467062 HDAC1Q13547 482 aaPredicted RBP22.35■■□□□ 1.17
SNAPC3-205ENST00000467062 KRT24Q2M2I5 525 aa22.34■■□□□ 1.17
SNAPC3-205ENST00000467062 HSCBQ8IWL3 235 aa22.34■■□□□ 1.17
SNAPC3-205ENST00000467062 DLC1Q96QB1 1528 aa22.33■■□□□ 1.17
SNAPC3-205ENST00000467062 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.16
SNAPC3-205ENST00000467062 SULT6B1Q6IMI4 303 aa22.33■■□□□ 1.16
SNAPC3-205ENST00000467062 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.16
SNAPC3-205ENST00000467062 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.16
SNAPC3-205ENST00000467062 TNRQ92752 1358 aa22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 MAP2P11137 1827 aaKnown RBP22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 ANKRD26Q9UPS8 1709 aa22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 ZNF500O60304 480 aaPredicted RBP22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 HDGFP51858 240 aaKnown RBP22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 C22orf23Q9BZE7 217 aa22.32■■□□□ 1.16
SNAPC3-205ENST00000467062 ACEP12821 1306 aa22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 SMC5Q8IY18 1101 aa22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 BBXQ8WY36 941 aaPredicted RBP22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 KIF20BQ96Q89 1820 aa22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 GNAI1P63096 354 aa22.31■■□□□ 1.16
SNAPC3-205ENST00000467062 CSPP1Q1MSJ5 1256 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms