RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CFAP53Q96M91 514 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 ANKRD30BQ9BXX2 1392 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 ADCY5O95622 1261 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 CCDC172P0C7W6 258 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 MORC1Q86VD1 984 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 BRMS1Q9HCU9 246 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 MPHOSPH10O00566 681 aaKnown RBP9.13□□□□□ -0.95
VTI1A-201ENST00000393077 CASQ1P31415 396 aa9.13□□□□□ -0.95
VTI1A-201ENST00000393077 TMCO3Q6UWJ1 677 aa9.13□□□□□ -0.95
VTI1A-201ENST00000393077 LRRFIP2Q9Y608 721 aaKnown RBP9.13□□□□□ -0.95
VTI1A-201ENST00000393077 KIAA0556O60303 1618 aa9.13□□□□□ -0.95
VTI1A-201ENST00000393077 HNRNPH2P55795 449 aaKnown RBP9.13□□□□□ -0.95
VTI1A-201ENST00000393077 RNF20Q5VTR2 975 aa9.13□□□□□ -0.95
VTI1A-201ENST00000393077 RAPGEF6Q8TEU7 1601 aa9.13□□□□□ -0.95
VTI1A-201ENST00000393077 MAP2K2P36507 400 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 IGHDP01880 384 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 SKIDA1Q1XH10 827 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 CFAP70Q5T0N1 1121 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 TMEM132EQ6IEE7 984 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 CCAR2Q8N163 923 aaKnown RBP9.12□□□□□ -0.95
VTI1A-201ENST00000393077 CNKSR2Q8WXI2 1034 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 JRKLQ9Y4A0 524 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 NUP160Q12769 1436 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 ITPRIPQ8IWB1 547 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 PAXBP1Q9Y5B6 917 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-201ENST00000393077 CCDC141Q6ZP82 1450 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 BCAR3O75815 825 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-201ENST00000393077 LMAN1P49257 510 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 PDE3AQ14432 1141 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
VTI1A-201ENST00000393077 HSP90B2PQ58FF3 399 aa9.11□□□□□ -0.95
VTI1A-201ENST00000393077 CCDC146Q8IYE0 955 aa9.11□□□□□ -0.95
VTI1A-201ENST00000393077 NUTM2FA1L443 756 aa9.11□□□□□ -0.95
VTI1A-201ENST00000393077 NOL8Q76FK4 1167 aaKnown RBP9.11□□□□□ -0.95
VTI1A-201ENST00000393077 GTF3C6Q969F1 213 aa9.11□□□□□ -0.95
VTI1A-201ENST00000393077 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.11□□□□□ -0.95
VTI1A-201ENST00000393077 FEZ2Q9UHY8 353 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-201ENST00000393077 V9GYY5 206 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-201ENST00000393077 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
VTI1A-201ENST00000393077 TRIM5Q9C035 493 aa9.11□□□□□ -0.95
VTI1A-201ENST00000393077 KIF14Q15058 1648 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 RAD51AP2Q09MP3 1159 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 BCL2L13Q9BXK5 485 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 PBRM1Q86U86 1689 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 SMTNL1A8MU46 457 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 MCCP23508 829 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-201ENST00000393077 GORABQ5T7V8 394 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 RPAINQ86UA6 219 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 CWC22Q9HCG8 908 aaKnown RBP9.1□□□□□ -0.95
VTI1A-201ENST00000393077 PLEKHH2Q8IVE3 1493 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 ZNF853P0CG23 659 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 SATB1Q01826 763 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 PPP2R5AQ15172 486 aa9.1□□□□□ -0.95
VTI1A-201ENST00000393077 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
VTI1A-201ENST00000393077 PAIP2Q9BPZ3 127 aaKnown RBP9.09□□□□□ -0.95
VTI1A-201ENST00000393077 CLSTN1O94985 981 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
VTI1A-201ENST00000393077 UVSSAQ2YD98 709 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 EP400NLQ6ZTU2 488 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 UBXN4Q92575 508 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 GOLGA6L19H0YKK7 550 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 TPM1P09493 284 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 RABEP1Q15276 862 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 PTPN14Q15678 1187 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 MRVI1Q9Y6F6 885 aa9.09□□□□□ -0.95
VTI1A-201ENST00000393077 IVLP07476 585 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 E2F4Q16254 413 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 ZSCAN26Q16670 478 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
VTI1A-201ENST00000393077 NEK11Q8NG66 645 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 MAGI3Q5TCQ9 1506 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 KIF18AQ8NI77 898 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 LNPKQ9C0E8 428 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 ACBD3Q9H3P7 528 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-201ENST00000393077 SAMD9Q5K651 1589 aa9.08□□□□□ -0.96
VTI1A-201ENST00000393077 DDX41Q9UJV9 622 aaKnown RBP9.07□□□□□ -0.96
VTI1A-201ENST00000393077 CFAP43Q8NDM7 1665 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 SNX21Q969T3 373 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 KCNG1Q9UIX4 513 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 CD109Q6YHK3 1445 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 MYO1CO00159 1063 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 FKBP5Q13451 457 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-201ENST00000393077 SART3Q15020 963 aaKnown RBP9.07□□□□□ -0.96
VTI1A-201ENST00000393077 FILIP1Q7Z7B0 1213 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 ADRA2BP18089 450 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 CEP135Q66GS9 1140 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
VTI1A-201ENST00000393077 KIF2AO00139 706 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-201ENST00000393077 APAF1O14727 1248 aa9.06□□□□□ -0.96
VTI1A-201ENST00000393077 LIG1P18858 919 aa9.06□□□□□ -0.96
VTI1A-201ENST00000393077 CEP120Q8N960 986 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms