RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
TNIP1-202ENST00000389378 TWISTNBQ3B726 338 aaPredicted RBP20.24■□□□□ 0.83
TNIP1-202ENST00000389378 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
TNIP1-202ENST00000389378 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
TNIP1-202ENST00000389378 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
TNIP1-202ENST00000389378 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
TNIP1-202ENST00000389378 WAPLQ7Z5K2 1190 aa20.23■□□□□ 0.83
TNIP1-202ENST00000389378 CDC45O75419 566 aa20.23■□□□□ 0.83
TNIP1-202ENST00000389378 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
TNIP1-202ENST00000389378 NASPP49321 788 aaPredicted RBP20.23■□□□□ 0.83
TNIP1-202ENST00000389378 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
TNIP1-202ENST00000389378 FOXD4L5Q5VV16 416 aaPredicted RBP20.22■□□□□ 0.83
TNIP1-202ENST00000389378 FOXD4L4Q8WXT5 416 aaPredicted RBP20.22■□□□□ 0.83
TNIP1-202ENST00000389378 SMARCA5O60264 1052 aaPredicted RBP20.21■□□□□ 0.83
TNIP1-202ENST00000389378 NPM1P06748 294 aaKnown RBP eCLIP20.21■□□□□ 0.83
TNIP1-202ENST00000389378 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
TNIP1-202ENST00000389378 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
TNIP1-202ENST00000389378 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
TNIP1-202ENST00000389378 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.82
TNIP1-202ENST00000389378 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
TNIP1-202ENST00000389378 FBXO31Q5XUX0 539 aaPredicted RBP20.19■□□□□ 0.82
TNIP1-202ENST00000389378 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
TNIP1-202ENST00000389378 LRRC7Q96NW7 1537 aa20.19■□□□□ 0.82
TNIP1-202ENST00000389378 GNAI1P63096 354 aa20.19■□□□□ 0.82
TNIP1-202ENST00000389378 RRS1Q15050 365 aaKnown RBP20.19■□□□□ 0.82
TNIP1-202ENST00000389378 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
TNIP1-202ENST00000389378 FRMPD1Q5SYB0 1578 aa20.18■□□□□ 0.82
TNIP1-202ENST00000389378 ABCC3O15438 1527 aa20.18■□□□□ 0.82
TNIP1-202ENST00000389378 NME9Q86XW9 330 aa20.17■□□□□ 0.82
TNIP1-202ENST00000389378 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
TNIP1-202ENST00000389378 PNPLA6Q8IY17 1366 aa20.17■□□□□ 0.82
TNIP1-202ENST00000389378 ZGPATQ8N5A5 531 aaKnown RBP20.17■□□□□ 0.82
TNIP1-202ENST00000389378 CFAP74Q9C0B2 1584 aa20.17■□□□□ 0.82
TNIP1-202ENST00000389378 SIGLEC1Q9BZZ2 1709 aa20.16■□□□□ 0.82
TNIP1-202ENST00000389378 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
TNIP1-202ENST00000389378 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
TNIP1-202ENST00000389378 ABCC4O15439 1325 aa20.15■□□□□ 0.82
TNIP1-202ENST00000389378 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
TNIP1-202ENST00000389378 CHMP4BQ9H444 224 aaKnown RBP20.15■□□□□ 0.82
TNIP1-202ENST00000389378 RBM27Q9P2N5 1060 aaKnown RBP20.15■□□□□ 0.82
TNIP1-202ENST00000389378 KLHL40Q2TBA0 621 aa20.15■□□□□ 0.82
TNIP1-202ENST00000389378 IFT57Q9NWB7 429 aa20.15■□□□□ 0.82
TNIP1-202ENST00000389378 MED14O60244 1454 aa20.15■□□□□ 0.82
TNIP1-202ENST00000389378 FAM135BQ49AJ0 1406 aa20.14■□□□□ 0.82
TNIP1-202ENST00000389378 PRPF40AO75400 957 aaKnown RBP20.14■□□□□ 0.81
TNIP1-202ENST00000389378 CALD1Q05682 793 aaKnown RBP20.14■□□□□ 0.81
TNIP1-202ENST00000389378 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
TNIP1-202ENST00000389378 POGZQ7Z3K3 1410 aa20.14■□□□□ 0.81
TNIP1-202ENST00000389378 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
TNIP1-202ENST00000389378 TTC22Q5TAA0 569 aa20.13■□□□□ 0.81
TNIP1-202ENST00000389378 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
TNIP1-202ENST00000389378 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
TNIP1-202ENST00000389378 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
TNIP1-202ENST00000389378 CCDC173Q0VFZ6 552 aa20.13■□□□□ 0.81
TNIP1-202ENST00000389378 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
TNIP1-202ENST00000389378 RABEP1Q15276 862 aa20.12■□□□□ 0.81
TNIP1-202ENST00000389378 PTPRMP28827 1452 aa20.12■□□□□ 0.81
TNIP1-202ENST00000389378 SDSP20132 328 aa20.12■□□□□ 0.81
TNIP1-202ENST00000389378 IL13P35225 146 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 GLIPR1L2Q4G1C9 344 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 PTCH1Q13635 1447 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 ZNF853P0CG23 659 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 PTMSP20962 102 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 ZSCAN23Q3MJ62 389 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
TNIP1-202ENST00000389378 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
TNIP1-202ENST00000389378 RRP9O43818 475 aaKnown RBP20.1■□□□□ 0.81
TNIP1-202ENST00000389378 RBSNQ9H1K0 784 aa20.1■□□□□ 0.81
TNIP1-202ENST00000389378 HECW2Q9P2P5 1572 aa20.1■□□□□ 0.81
TNIP1-202ENST00000389378 MSNP26038 577 aaKnown RBP20.09■□□□□ 0.81
TNIP1-202ENST00000389378 TSHZ3Q63HK5 1081 aa20.09■□□□□ 0.81
TNIP1-202ENST00000389378 LMBRD1Q9NUN5 540 aa20.09■□□□□ 0.81
TNIP1-202ENST00000389378 SLC52A1Q9NWF4 448 aa20.09■□□□□ 0.81
TNIP1-202ENST00000389378 PRIM1P49642 420 aaKnown RBP20.09■□□□□ 0.81
TNIP1-202ENST00000389378 ZSCAN30Q86W11 494 aa20.09■□□□□ 0.81
TNIP1-202ENST00000389378 AEBP1Q8IUX7 1158 aa20.09■□□□□ 0.81
TNIP1-202ENST00000389378 FOXD4L6Q3SYB3 417 aaPredicted RBP20.09■□□□□ 0.81
TNIP1-202ENST00000389378 FOXD4L3Q6VB84 417 aaPredicted RBP20.09■□□□□ 0.81
TNIP1-202ENST00000389378 PIK3R4Q99570 1358 aa20.08■□□□□ 0.81
TNIP1-202ENST00000389378 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.81
TNIP1-202ENST00000389378 SOX12O15370 315 aa20.08■□□□□ 0.81
TNIP1-202ENST00000389378 INTS3Q68E01 1043 aaKnown RBP20.08■□□□□ 0.81
TNIP1-202ENST00000389378 MCM10Q7L590 875 aa20.08■□□□□ 0.81
TNIP1-202ENST00000389378 MIS18AQ9NYP9 233 aa20.08■□□□□ 0.81
TNIP1-202ENST00000389378 MEIS3Q99687 375 aa20.08■□□□□ 0.8
TNIP1-202ENST00000389378 RBM10P98175 930 aaKnown RBP20.07■□□□□ 0.8
TNIP1-202ENST00000389378 PPP1R9BQ96SB3 815 aa20.07■□□□□ 0.8
TNIP1-202ENST00000389378 NUCB2P80303 420 aa20.07■□□□□ 0.8
TNIP1-202ENST00000389378 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
TNIP1-202ENST00000389378 MLH3Q9UHC1 1453 aa20.06■□□□□ 0.8
TNIP1-202ENST00000389378 SLC4A10Q6U841 1118 aa20.06■□□□□ 0.8
TNIP1-202ENST00000389378 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
TNIP1-202ENST00000389378 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
TNIP1-202ENST00000389378 GPT2Q8TD30 523 aa20.06■□□□□ 0.8
TNIP1-202ENST00000389378 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
TNIP1-202ENST00000389378 CEP85Q6P2H3 762 aa20.05■□□□□ 0.8
TNIP1-202ENST00000389378 MYO5BQ9ULV0 1848 aa20.05■□□□□ 0.8
TNIP1-202ENST00000389378 ANKRD44Q8N8A2 993 aa20.05■□□□□ 0.8
TNIP1-202ENST00000389378 RNF214Q8ND24 703 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms