RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 SNX21Q969T3 373 aa25.88■■□□□ 1.73
TRIM3-202ENST00000359518 GCC1Q96CN9 775 aa25.88■■□□□ 1.73
TRIM3-202ENST00000359518 APBB1O00213 710 aa25.88■■□□□ 1.73
TRIM3-202ENST00000359518 DDIT3P35638 169 aa25.88■■□□□ 1.73
TRIM3-202ENST00000359518 GNAI1P63096 354 aa25.87■■□□□ 1.73
TRIM3-202ENST00000359518 GRPEL1Q9HAV7 217 aa25.87■■□□□ 1.73
TRIM3-202ENST00000359518 FAM135BQ49AJ0 1406 aa25.86■■□□□ 1.73
TRIM3-202ENST00000359518 MRE11P49959 708 aa25.85■■□□□ 1.73
TRIM3-202ENST00000359518 ZFYVE9O95405 1425 aa25.85■■□□□ 1.73
TRIM3-202ENST00000359518 KRT24Q2M2I5 525 aa25.84■■□□□ 1.73
TRIM3-202ENST00000359518 C16orf71Q8IYS4 520 aaPredicted RBP25.84■■□□□ 1.73
TRIM3-202ENST00000359518 GAS2L3Q86XJ1 694 aa25.84■■□□□ 1.73
TRIM3-202ENST00000359518 IL13P35225 146 aa25.83■■□□□ 1.73
TRIM3-202ENST00000359518 DIP2CQ9Y2E4 1556 aa25.83■■□□□ 1.73
TRIM3-202ENST00000359518 GAS2L2Q8NHY3 880 aa25.83■■□□□ 1.73
TRIM3-202ENST00000359518 IFT57Q9NWB7 429 aa25.83■■□□□ 1.73
TRIM3-202ENST00000359518 MED14O60244 1454 aa25.83■■□□□ 1.73
TRIM3-202ENST00000359518 GBP4Q96PP9 640 aa25.82■■□□□ 1.72
TRIM3-202ENST00000359518 ARHGAP31Q2M1Z3 1444 aa25.82■■□□□ 1.72
TRIM3-202ENST00000359518 SSFA2P28290 1259 aa25.82■■□□□ 1.72
TRIM3-202ENST00000359518 ZNF428Q96B54 188 aa25.82■■□□□ 1.72
TRIM3-202ENST00000359518 NCOA3Q9Y6Q9 1424 aa25.82■■□□□ 1.72
TRIM3-202ENST00000359518 ARHGEF40Q8TER5 1519 aa25.82■■□□□ 1.72
TRIM3-202ENST00000359518 K7ELQ4 463 aaPredicted RBP25.82■■□□□ 1.72
TRIM3-202ENST00000359518 CFAP74Q9C0B2 1584 aa25.81■■□□□ 1.72
TRIM3-202ENST00000359518 MLECQ14165 292 aa25.81■■□□□ 1.72
TRIM3-202ENST00000359518 RAB3GAP1Q15042 981 aa25.81■■□□□ 1.72
TRIM3-202ENST00000359518 CALD1Q05682 793 aaKnown RBP25.81■■□□□ 1.72
TRIM3-202ENST00000359518 ARHGAP45Q92619 1136 aa25.81■■□□□ 1.72
TRIM3-202ENST00000359518 NAP1L5Q96NT1 182 aaPredicted RBP25.81■■□□□ 1.72
TRIM3-202ENST00000359518 GSPT1P15170 499 aaKnown RBP25.8■■□□□ 1.72
TRIM3-202ENST00000359518 BRPF1P55201 1214 aaPredicted RBP25.8■■□□□ 1.72
TRIM3-202ENST00000359518 ABCC4O15439 1325 aa25.79■■□□□ 1.72
TRIM3-202ENST00000359518 TXNDC2Q86VQ3 553 aa25.79■■□□□ 1.72
TRIM3-202ENST00000359518 OTUD7AQ8TE49 926 aaPredicted RBP25.79■■□□□ 1.72
TRIM3-202ENST00000359518 CHMP4BQ9H444 224 aaKnown RBP25.79■■□□□ 1.72
TRIM3-202ENST00000359518 ZNF853P0CG23 659 aa25.78■■□□□ 1.72
TRIM3-202ENST00000359518 CDC45O75419 566 aa25.78■■□□□ 1.72
TRIM3-202ENST00000359518 CFAP44Q96MT7 982 aa25.78■■□□□ 1.72
TRIM3-202ENST00000359518 TMEM131LA2VDJ0 1609 aa25.78■■□□□ 1.72
TRIM3-202ENST00000359518 ALKQ9UM73 1620 aa25.77■■□□□ 1.72
TRIM3-202ENST00000359518 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
TRIM3-202ENST00000359518 MAP2P11137 1827 aaKnown RBP25.77■■□□□ 1.72
TRIM3-202ENST00000359518 AEBP1Q8IUX7 1158 aa25.77■■□□□ 1.72
TRIM3-202ENST00000359518 PLEKHM2Q8IWE5 1019 aa25.76■■□□□ 1.71
TRIM3-202ENST00000359518 CIZ1Q9ULV3 898 aaPredicted RBP25.76■■□□□ 1.71
TRIM3-202ENST00000359518 PTCH1Q13635 1447 aa25.75■■□□□ 1.71
TRIM3-202ENST00000359518 SOX12O15370 315 aa25.75■■□□□ 1.71
TRIM3-202ENST00000359518 SMARCA5O60264 1052 aaPredicted RBP25.75■■□□□ 1.71
TRIM3-202ENST00000359518 API5Q9BZZ5 524 aaKnown RBP25.75■■□□□ 1.71
TRIM3-202ENST00000359518 COG3Q96JB2 828 aa25.75■■□□□ 1.71
TRIM3-202ENST00000359518 NUTM2FA1L443 756 aa25.74■■□□□ 1.71
TRIM3-202ENST00000359518 NEO1Q92859 1461 aa25.73■■□□□ 1.71
TRIM3-202ENST00000359518 PIK3R4Q99570 1358 aa25.72■■□□□ 1.71
TRIM3-202ENST00000359518 MCM10Q7L590 875 aa25.72■■□□□ 1.71
TRIM3-202ENST00000359518 KIF20BQ96Q89 1820 aa25.72■■□□□ 1.71
TRIM3-202ENST00000359518 WASLO00401 505 aaPredicted RBP25.72■■□□□ 1.71
TRIM3-202ENST00000359518 ERBB4Q15303 1308 aa25.71■■□□□ 1.71
TRIM3-202ENST00000359518 NUDT16Q96DE0 195 aaKnown RBP25.71■■□□□ 1.71
TRIM3-202ENST00000359518 AK9Q5TCS8 1911 aa25.71■■□□□ 1.71
TRIM3-202ENST00000359518 SULT6B1Q6IMI4 303 aa25.71■■□□□ 1.71
TRIM3-202ENST00000359518 PREX1Q8TCU6 1659 aa25.71■■□□□ 1.71
TRIM3-202ENST00000359518 CLCN1P35523 988 aa25.7■■□□□ 1.71
TRIM3-202ENST00000359518 LMOD3Q0VAK6 560 aa25.69■■□□□ 1.7
TRIM3-202ENST00000359518 TRIM44Q96DX7 344 aaPredicted RBP25.69■■□□□ 1.7
TRIM3-202ENST00000359518 NCLP19338 710 aaKnown RBP25.69■■□□□ 1.7
TRIM3-202ENST00000359518 DCTPP1Q9H773 170 aa25.69■■□□□ 1.7
TRIM3-202ENST00000359518 MIS18AQ9NYP9 233 aa25.69■■□□□ 1.7
TRIM3-202ENST00000359518 DDX49Q9Y6V7 483 aaKnown RBP25.69■■□□□ 1.7
TRIM3-202ENST00000359518 CLTCQ00610 1675 aaKnown RBP25.68■■□□□ 1.7
TRIM3-202ENST00000359518 RIMS2Q9UQ26 1411 aa25.68■■□□□ 1.7
TRIM3-202ENST00000359518 TTC22Q5TAA0 569 aa25.68■■□□□ 1.7
TRIM3-202ENST00000359518 ESPNB1AK53 854 aa25.67■■□□□ 1.7
TRIM3-202ENST00000359518 PKP1Q13835 747 aa25.67■■□□□ 1.7
TRIM3-202ENST00000359518 BAG4O95429 457 aaKnown RBP25.66■■□□□ 1.7
TRIM3-202ENST00000359518 SKOR2Q2VWA4 1001 aaPredicted RBP25.66■■□□□ 1.7
TRIM3-202ENST00000359518 CDC42BPGQ6DT37 1551 aa25.66■■□□□ 1.7
TRIM3-202ENST00000359518 MCTP1Q6DN14 999 aa25.66■■□□□ 1.7
TRIM3-202ENST00000359518 UBE2Q2Q8WVN8 375 aa25.66■■□□□ 1.7
TRIM3-202ENST00000359518 MEIS3Q99687 375 aa25.66■■□□□ 1.7
TRIM3-202ENST00000359518 GOLGA6L22H0YM25 854 aa25.65■■□□□ 1.7
TRIM3-202ENST00000359518 SDSP20132 328 aa25.64■■□□□ 1.69
TRIM3-202ENST00000359518 SLC4A10Q6U841 1118 aa25.63■■□□□ 1.69
TRIM3-202ENST00000359518 USP26Q9BXU7 913 aa25.63■■□□□ 1.69
TRIM3-202ENST00000359518 ATP7BP35670 1465 aa25.63■■□□□ 1.69
TRIM3-202ENST00000359518 CCDC61Q9Y6R9 512 aa25.63■■□□□ 1.69
TRIM3-202ENST00000359518 EDC4Q6P2E9 1401 aaKnown RBP25.63■■□□□ 1.69
TRIM3-202ENST00000359518 CEP85Q6P2H3 762 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 ANKRD44Q8N8A2 993 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 CHAMP1Q96JM3 812 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 RIMBP3CA6NJZ7 1639 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 RIMBP3BA6NNM3 1639 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 RIMBP3Q9UFD9 1639 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 METP08581 1390 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 RABEP1Q15276 862 aa25.62■■□□□ 1.69
TRIM3-202ENST00000359518 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
TRIM3-202ENST00000359518 FOXD4L5Q5VV16 416 aaPredicted RBP25.61■■□□□ 1.69
TRIM3-202ENST00000359518 INTS3Q68E01 1043 aaKnown RBP25.61■■□□□ 1.69
TRIM3-202ENST00000359518 FOXD4L4Q8WXT5 416 aaPredicted RBP25.61■■□□□ 1.69
TRIM3-202ENST00000359518 ZGPATQ8N5A5 531 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms