RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PDIA4P13667 645 aaKnown RBP20.51■□□□□ 0.87
CDC42EP4-201ENST00000335793 FAM13BQ9NYF5 915 aa20.51■□□□□ 0.87
CDC42EP4-201ENST00000335793 MYO3AQ8NEV4 1616 aa20.51■□□□□ 0.87
CDC42EP4-201ENST00000335793 BBXQ8WY36 941 aaPredicted RBP20.51■□□□□ 0.87
CDC42EP4-201ENST00000335793 MBIPQ9NS73 344 aa20.51■□□□□ 0.87
CDC42EP4-201ENST00000335793 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
CDC42EP4-201ENST00000335793 DDX11L8A8MPP1 907 aa20.5■□□□□ 0.87
CDC42EP4-201ENST00000335793 ZBTB7BO15156 539 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP4-201ENST00000335793 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
CDC42EP4-201ENST00000335793 RBM42Q9BTD8 480 aaKnown RBP20.49■□□□□ 0.87
CDC42EP4-201ENST00000335793 GBP4Q96PP9 640 aa20.49■□□□□ 0.87
CDC42EP4-201ENST00000335793 MRPL50Q8N5N7 158 aaKnown RBP20.48■□□□□ 0.87
CDC42EP4-201ENST00000335793 C8orf58Q8NAV2 365 aa20.48■□□□□ 0.87
CDC42EP4-201ENST00000335793 IFT172Q9UG01 1749 aa20.48■□□□□ 0.87
CDC42EP4-201ENST00000335793 PDCL3Q9H2J4 239 aa20.48■□□□□ 0.87
CDC42EP4-201ENST00000335793 PPLO60437 1756 aa20.48■□□□□ 0.87
CDC42EP4-201ENST00000335793 ZMYM3Q14202 1370 aa20.47■□□□□ 0.87
CDC42EP4-201ENST00000335793 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
CDC42EP4-201ENST00000335793 NCLP19338 710 aaKnown RBP20.47■□□□□ 0.87
CDC42EP4-201ENST00000335793 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
CDC42EP4-201ENST00000335793 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
CDC42EP4-201ENST00000335793 TNPO1Q92973 898 aaKnown RBP20.46■□□□□ 0.87
CDC42EP4-201ENST00000335793 API5Q9BZZ5 524 aaKnown RBP20.46■□□□□ 0.87
CDC42EP4-201ENST00000335793 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
CDC42EP4-201ENST00000335793 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
CDC42EP4-201ENST00000335793 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
CDC42EP4-201ENST00000335793 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
CDC42EP4-201ENST00000335793 IFT57Q9NWB7 429 aa20.44■□□□□ 0.86
CDC42EP4-201ENST00000335793 FRMPD1Q5SYB0 1578 aa20.44■□□□□ 0.86
CDC42EP4-201ENST00000335793 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
CDC42EP4-201ENST00000335793 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
CDC42EP4-201ENST00000335793 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
CDC42EP4-201ENST00000335793 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
CDC42EP4-201ENST00000335793 ESPNB1AK53 854 aa20.43■□□□□ 0.86
CDC42EP4-201ENST00000335793 ERBB4Q15303 1308 aa20.42■□□□□ 0.86
CDC42EP4-201ENST00000335793 RBM25P49756 843 aaKnown RBP20.42■□□□□ 0.86
CDC42EP4-201ENST00000335793 NUDT16Q96DE0 195 aaKnown RBP20.42■□□□□ 0.86
CDC42EP4-201ENST00000335793 NEXMIFQ5QGS0 1516 aa20.42■□□□□ 0.86
CDC42EP4-201ENST00000335793 KIAA1211Q6ZU35 1233 aa20.42■□□□□ 0.86
CDC42EP4-201ENST00000335793 CDC45O75419 566 aa20.42■□□□□ 0.86
CDC42EP4-201ENST00000335793 CAMSAP1Q5T5Y3 1602 aa20.41■□□□□ 0.86
CDC42EP4-201ENST00000335793 MRE11P49959 708 aa20.41■□□□□ 0.86
CDC42EP4-201ENST00000335793 C16orf71Q8IYS4 520 aaPredicted RBP20.41■□□□□ 0.86
CDC42EP4-201ENST00000335793 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
CDC42EP4-201ENST00000335793 WASLO00401 505 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 K7ELQ4 463 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 MCM10Q7L590 875 aa20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 CD2BP2O95400 341 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 IL13P35225 146 aa20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 SIRT2Q8IXJ6 389 aa20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 GRPEL1Q9HAV7 217 aa20.4■□□□□ 0.86
CDC42EP4-201ENST00000335793 ARHGAP45Q92619 1136 aa20.39■□□□□ 0.86
CDC42EP4-201ENST00000335793 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
CDC42EP4-201ENST00000335793 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
CDC42EP4-201ENST00000335793 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
CDC42EP4-201ENST00000335793 SMARCA5O60264 1052 aaPredicted RBP20.38■□□□□ 0.85
CDC42EP4-201ENST00000335793 CCDC61Q9Y6R9 512 aa20.38■□□□□ 0.85
CDC42EP4-201ENST00000335793 SNX21Q969T3 373 aa20.38■□□□□ 0.85
CDC42EP4-201ENST00000335793 ZC3H13Q5T200 1668 aaKnown RBP20.37■□□□□ 0.85
CDC42EP4-201ENST00000335793 ARHGEF28Q8N1W1 1705 aaKnown RBP20.37■□□□□ 0.85
CDC42EP4-201ENST00000335793 ZBTB7CA1YPR0 619 aa20.37■□□□□ 0.85
CDC42EP4-201ENST00000335793 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
CDC42EP4-201ENST00000335793 DDX49Q9Y6V7 483 aaKnown RBP20.37■□□□□ 0.85
CDC42EP4-201ENST00000335793 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
CDC42EP4-201ENST00000335793 VIRMAQ69YN4 1812 aaKnown RBP20.36■□□□□ 0.85
CDC42EP4-201ENST00000335793 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
CDC42EP4-201ENST00000335793 SSFA2P28290 1259 aa20.36■□□□□ 0.85
CDC42EP4-201ENST00000335793 ANP32BQ92688 251 aaKnown RBP20.36■□□□□ 0.85
CDC42EP4-201ENST00000335793 PTPRMP28827 1452 aa20.36■□□□□ 0.85
CDC42EP4-201ENST00000335793 ADGRB2O60241 1585 aa20.35■□□□□ 0.85
CDC42EP4-201ENST00000335793 USP32Q8NFA0 1604 aa20.35■□□□□ 0.85
CDC42EP4-201ENST00000335793 COL3A1P02461 1466 aaPredicted RBP20.35■□□□□ 0.85
CDC42EP4-201ENST00000335793 GAS2L2Q8NHY3 880 aa20.35■□□□□ 0.85
CDC42EP4-201ENST00000335793 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
CDC42EP4-201ENST00000335793 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 OTUD7AQ8TE49 926 aaPredicted RBP20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 CIZ1Q9ULV3 898 aaPredicted RBP20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
CDC42EP4-201ENST00000335793 PLCD3Q8N3E9 789 aa20.33■□□□□ 0.84
CDC42EP4-201ENST00000335793 NECTIN2Q92692 538 aa20.33■□□□□ 0.84
CDC42EP4-201ENST00000335793 FSD2A1L4K1 749 aa20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 HAP1P54257 671 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 ZNF692Q9BU19 519 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 NAP1L2Q9ULW6 460 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 SKOR2Q2VWA4 1001 aaPredicted RBP20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 SIGLEC1Q9BZZ2 1709 aa20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 LRRC7Q96NW7 1537 aa20.32■□□□□ 0.84
CDC42EP4-201ENST00000335793 ARHGAP31Q2M1Z3 1444 aa20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 GSPT1P15170 499 aaKnown RBP20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 RAB3GAP1Q15042 981 aa20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 NEO1Q92859 1461 aa20.31■□□□□ 0.84
CDC42EP4-201ENST00000335793 DIP2BQ9P265 1576 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms