RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
LDLRAD3-201ENST00000315571 CDC42BPGQ6DT37 1551 aa14.62□□□□□ -0.07
LDLRAD3-201ENST00000315571 LRRC7Q96NW7 1537 aa14.62□□□□□ -0.07
LDLRAD3-201ENST00000315571 ATP7BP35670 1465 aa14.62□□□□□ -0.07
LDLRAD3-201ENST00000315571 MCM4P33991 863 aa14.61□□□□□ -0.07
LDLRAD3-201ENST00000315571 CADPS2Q86UW7 1296 aa14.61□□□□□ -0.07
LDLRAD3-201ENST00000315571 NALCNQ8IZF0 1738 aa14.61□□□□□ -0.07
LDLRAD3-201ENST00000315571 ANKRD36BQ8N2N9 1353 aa14.61□□□□□ -0.07
LDLRAD3-201ENST00000315571 ANKARQ7Z5J8 1434 aa14.61□□□□□ -0.07
LDLRAD3-201ENST00000315571 NGDNQ8NEJ9 315 aaKnown RBP14.6□□□□□ -0.07
LDLRAD3-201ENST00000315571 PMFBP1Q8TBY8 1022 aa14.6□□□□□ -0.07
LDLRAD3-201ENST00000315571 ESCO1Q5FWF5 840 aa14.6□□□□□ -0.07
LDLRAD3-201ENST00000315571 ZSCAN30Q86W11 494 aa14.6□□□□□ -0.07
LDLRAD3-201ENST00000315571 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
LDLRAD3-201ENST00000315571 APPP05067 770 aa14.59□□□□□ -0.07
LDLRAD3-201ENST00000315571 A0A1W2PP64 1363 aa14.59□□□□□ -0.07
LDLRAD3-201ENST00000315571 MYOM1P52179 1685 aa14.59□□□□□ -0.07
LDLRAD3-201ENST00000315571 XPCQ01831 940 aaPredicted RBP14.59□□□□□ -0.07
LDLRAD3-201ENST00000315571 ERBB4Q15303 1308 aa14.59□□□□□ -0.07
LDLRAD3-201ENST00000315571 TNNT3P45378 269 aaPredicted RBP14.58□□□□□ -0.07
LDLRAD3-201ENST00000315571 NSD3Q9BZ95 1437 aa14.58□□□□□ -0.07
LDLRAD3-201ENST00000315571 DCCP43146 1447 aa14.58□□□□□ -0.08
LDLRAD3-201ENST00000315571 CC2D1BQ5T0F9 858 aaKnown RBP14.58□□□□□ -0.08
LDLRAD3-201ENST00000315571 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.58□□□□□ -0.08
LDLRAD3-201ENST00000315571 ZFP91Q96JP5 570 aaPredicted RBP14.58□□□□□ -0.08
LDLRAD3-201ENST00000315571 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.08
LDLRAD3-201ENST00000315571 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 PER1O15534 1290 aaPredicted RBP14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 CARD14Q9BXL6 1004 aa14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 ACEP12821 1306 aa14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 KTN1Q86UP2 1357 aaKnown RBP14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 NASPP49321 788 aaPredicted RBP14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
LDLRAD3-201ENST00000315571 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
LDLRAD3-201ENST00000315571 FMN2Q9NZ56 1722 aa14.56□□□□□ -0.08
LDLRAD3-201ENST00000315571 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
LDLRAD3-201ENST00000315571 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
LDLRAD3-201ENST00000315571 ZNF830Q96NB3 372 aaPredicted RBP14.55□□□□□ -0.08
LDLRAD3-201ENST00000315571 OFD1O75665 1012 aa14.55□□□□□ -0.08
LDLRAD3-201ENST00000315571 CERS3Q8IU89 383 aa14.55□□□□□ -0.08
LDLRAD3-201ENST00000315571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.55□□□□□ -0.08
LDLRAD3-201ENST00000315571 ORAI2Q96SN7 254 aa14.55□□□□□ -0.08
LDLRAD3-201ENST00000315571 C1orf167Q5SNV9 1468 aa14.54□□□□□ -0.08
LDLRAD3-201ENST00000315571 IRX3P78415 501 aaPredicted RBP14.54□□□□□ -0.08
LDLRAD3-201ENST00000315571 DMTNQ08495 405 aa14.54□□□□□ -0.08
LDLRAD3-201ENST00000315571 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
LDLRAD3-201ENST00000315571 USP32Q8NFA0 1604 aa14.53□□□□□ -0.08
LDLRAD3-201ENST00000315571 RIPK4P57078 832 aa14.53□□□□□ -0.08
LDLRAD3-201ENST00000315571 MST1RQ04912 1400 aa14.53□□□□□ -0.08
LDLRAD3-201ENST00000315571 ZBTB22O15209 634 aa14.53□□□□□ -0.08
LDLRAD3-201ENST00000315571 PSME1Q06323 249 aa14.53□□□□□ -0.08
LDLRAD3-201ENST00000315571 CPSF1Q10570 1443 aaKnown RBP14.52□□□□□ -0.08
LDLRAD3-201ENST00000315571 CHMP5Q9NZZ3 219 aa14.52□□□□□ -0.08
LDLRAD3-201ENST00000315571 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 KCNJ4P48050 445 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 HAP1P54257 671 aaPredicted RBP14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 CCDC173Q0VFZ6 552 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 SLAIN2Q9P270 581 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 ITSN1Q15811 1721 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 RALBP1Q15311 655 aa14.52□□□□□ -0.09
LDLRAD3-201ENST00000315571 FOXO3O43524 673 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 HSCBQ8IWL3 235 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 EDC4Q6P2E9 1401 aaKnown RBP14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 CDCA7LQ96GN5 454 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 GBP4Q96PP9 640 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 CCDC94Q9BW85 323 aaPredicted RBP14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 TOPAZ1Q8N9V7 1692 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 MORC1Q86VD1 984 aa14.51□□□□□ -0.09
LDLRAD3-201ENST00000315571 KIF20AO95235 890 aa14.5□□□□□ -0.09
LDLRAD3-201ENST00000315571 LETM1O95202 739 aaPredicted RBP14.5□□□□□ -0.09
LDLRAD3-201ENST00000315571 GGNBP2Q9H3C7 697 aa14.5□□□□□ -0.09
LDLRAD3-201ENST00000315571 USP6P35125 1406 aa14.5□□□□□ -0.09
LDLRAD3-201ENST00000315571 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
LDLRAD3-201ENST00000315571 C8orf34Q49A92 452 aa14.49□□□□□ -0.09
LDLRAD3-201ENST00000315571 NPC1L1Q9UHC9 1359 aa14.49□□□□□ -0.09
LDLRAD3-201ENST00000315571 TTC21BQ7Z4L5 1316 aa14.49□□□□□ -0.09
LDLRAD3-201ENST00000315571 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
LDLRAD3-201ENST00000315571 DYNC1I1O14576 645 aa14.49□□□□□ -0.09
LDLRAD3-201ENST00000315571 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
LDLRAD3-201ENST00000315571 NSD2O96028 1365 aa14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 RGPD8O14715 1765 aaPredicted RBP14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 BRD2P25440 801 aaKnown RBP14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 NME9Q86XW9 330 aa14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 GTPBP4Q9BZE4 634 aaKnown RBP14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 FYB1O15117 783 aa14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 TAF3Q5VWG9 929 aa14.48□□□□□ -0.09
LDLRAD3-201ENST00000315571 FSD2A1L4K1 749 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 UTP14CQ5TAP6 766 aaKnown RBP14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 RNF123Q5XPI4 1314 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 BRINP3Q76B58 766 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 TRERF1Q96PN7 1200 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 TTC21AQ8NDW8 1320 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 LMOD2Q6P5Q4 547 aa14.47□□□□□ -0.09
LDLRAD3-201ENST00000315571 TMEM51Q9NW97 253 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms