RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 YEATS2Q9ULM3 1422 aa21.09■□□□□ 0.97
RTN1-201ENST00000267484 NME9Q86XW9 330 aa21.09■□□□□ 0.97
RTN1-201ENST00000267484 NCKAP5LQ9HCH0 1330 aa21.08■□□□□ 0.97
RTN1-201ENST00000267484 TWISTNBQ3B726 338 aaPredicted RBP21.07■□□□□ 0.96
RTN1-201ENST00000267484 RRS1Q15050 365 aaKnown RBP21.07■□□□□ 0.96
RTN1-201ENST00000267484 GAS2L2Q8NHY3 880 aa21.07■□□□□ 0.96
RTN1-201ENST00000267484 GCC1Q96CN9 775 aa21.07■□□□□ 0.96
RTN1-201ENST00000267484 SSFA2P28290 1259 aa21.06■□□□□ 0.96
RTN1-201ENST00000267484 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
RTN1-201ENST00000267484 NAP1L5Q96NT1 182 aaPredicted RBP21.06■□□□□ 0.96
RTN1-201ENST00000267484 RAB3GAP1Q15042 981 aa21.06■□□□□ 0.96
RTN1-201ENST00000267484 APBB1O00213 710 aa21.06■□□□□ 0.96
RTN1-201ENST00000267484 MED14O60244 1454 aa21.05■□□□□ 0.96
RTN1-201ENST00000267484 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
RTN1-201ENST00000267484 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
RTN1-201ENST00000267484 DIP2CQ9Y2E4 1556 aa21.04■□□□□ 0.96
RTN1-201ENST00000267484 K7ELQ4 463 aaPredicted RBP21.04■□□□□ 0.96
RTN1-201ENST00000267484 ZFYVE9O95405 1425 aa21.04■□□□□ 0.96
RTN1-201ENST00000267484 GNAI1P63096 354 aa21.04■□□□□ 0.96
RTN1-201ENST00000267484 CFAP74Q9C0B2 1584 aa21.03■□□□□ 0.96
RTN1-201ENST00000267484 ERBB4Q15303 1308 aa21.03■□□□□ 0.96
RTN1-201ENST00000267484 ARHGEF40Q8TER5 1519 aa21.03■□□□□ 0.96
RTN1-201ENST00000267484 GBP4Q96PP9 640 aa21.03■□□□□ 0.96
RTN1-201ENST00000267484 ANKRD26Q9UPS8 1709 aa21.03■□□□□ 0.96
RTN1-201ENST00000267484 IL13P35225 146 aa21.03■□□□□ 0.96
RTN1-201ENST00000267484 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
RTN1-201ENST00000267484 BRPF1P55201 1214 aaPredicted RBP21.02■□□□□ 0.96
RTN1-201ENST00000267484 ABCC4O15439 1325 aa21.02■□□□□ 0.96
RTN1-201ENST00000267484 IFT57Q9NWB7 429 aa21.02■□□□□ 0.96
RTN1-201ENST00000267484 ARHGAP31Q2M1Z3 1444 aa21.01■□□□□ 0.95
RTN1-201ENST00000267484 ARHGAP45Q92619 1136 aa21.01■□□□□ 0.95
RTN1-201ENST00000267484 PTCH1Q13635 1447 aa21■□□□□ 0.95
RTN1-201ENST00000267484 ZNF853P0CG23 659 aa21■□□□□ 0.95
RTN1-201ENST00000267484 TMEM131LA2VDJ0 1609 aa21■□□□□ 0.95
RTN1-201ENST00000267484 ZNF428Q96B54 188 aa21■□□□□ 0.95
RTN1-201ENST00000267484 CLCN1P35523 988 aa21■□□□□ 0.95
RTN1-201ENST00000267484 PLEKHM2Q8IWE5 1019 aa21■□□□□ 0.95
RTN1-201ENST00000267484 CIZ1Q9ULV3 898 aaPredicted RBP21■□□□□ 0.95
RTN1-201ENST00000267484 CDC45O75419 566 aa20.99■□□□□ 0.95
RTN1-201ENST00000267484 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
RTN1-201ENST00000267484 ALKQ9UM73 1620 aa20.99■□□□□ 0.95
RTN1-201ENST00000267484 SMARCA5O60264 1052 aaPredicted RBP20.98■□□□□ 0.95
RTN1-201ENST00000267484 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
RTN1-201ENST00000267484 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
RTN1-201ENST00000267484 AK9Q5TCS8 1911 aa20.98■□□□□ 0.95
RTN1-201ENST00000267484 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
RTN1-201ENST00000267484 AEBP1Q8IUX7 1158 aa20.97■□□□□ 0.95
RTN1-201ENST00000267484 CALD1Q05682 793 aaKnown RBP20.97■□□□□ 0.95
RTN1-201ENST00000267484 CLTCQ00610 1675 aaKnown RBP20.96■□□□□ 0.95
RTN1-201ENST00000267484 ESPNB1AK53 854 aa20.95■□□□□ 0.95
RTN1-201ENST00000267484 PKP1Q13835 747 aa20.95■□□□□ 0.94
RTN1-201ENST00000267484 TXNDC2Q86VQ3 553 aa20.95■□□□□ 0.94
RTN1-201ENST00000267484 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
RTN1-201ENST00000267484 API5Q9BZZ5 524 aaKnown RBP20.95■□□□□ 0.94
RTN1-201ENST00000267484 PREX1Q8TCU6 1659 aa20.94■□□□□ 0.94
RTN1-201ENST00000267484 CDC42BPGQ6DT37 1551 aa20.94■□□□□ 0.94
RTN1-201ENST00000267484 MLECQ14165 292 aa20.94■□□□□ 0.94
RTN1-201ENST00000267484 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
RTN1-201ENST00000267484 DDX49Q9Y6V7 483 aaKnown RBP20.93■□□□□ 0.94
RTN1-201ENST00000267484 MCM10Q7L590 875 aa20.93■□□□□ 0.94
RTN1-201ENST00000267484 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
RTN1-201ENST00000267484 BAG4O95429 457 aaKnown RBP20.92■□□□□ 0.94
RTN1-201ENST00000267484 TTC22Q5TAA0 569 aa20.92■□□□□ 0.94
RTN1-201ENST00000267484 DCTPP1Q9H773 170 aa20.92■□□□□ 0.94
RTN1-201ENST00000267484 RIMS2Q9UQ26 1411 aa20.92■□□□□ 0.94
RTN1-201ENST00000267484 NCLP19338 710 aaKnown RBP20.92■□□□□ 0.94
RTN1-201ENST00000267484 COG3Q96JB2 828 aa20.92■□□□□ 0.94
RTN1-201ENST00000267484 CHAMP1Q96JM3 812 aa20.92■□□□□ 0.94
RTN1-201ENST00000267484 SOX12O15370 315 aa20.92■□□□□ 0.94
RTN1-201ENST00000267484 MCTP1Q6DN14 999 aa20.91■□□□□ 0.94
RTN1-201ENST00000267484 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
RTN1-201ENST00000267484 NUTM2FA1L443 756 aa20.91■□□□□ 0.94
RTN1-201ENST00000267484 NEO1Q92859 1461 aa20.91■□□□□ 0.94
RTN1-201ENST00000267484 SKOR2Q2VWA4 1001 aaPredicted RBP20.91■□□□□ 0.94
RTN1-201ENST00000267484 MIS18AQ9NYP9 233 aa20.91■□□□□ 0.94
RTN1-201ENST00000267484 WASLO00401 505 aaPredicted RBP20.9■□□□□ 0.94
RTN1-201ENST00000267484 SULT6B1Q6IMI4 303 aa20.9■□□□□ 0.94
RTN1-201ENST00000267484 UBE2Q2Q8WVN8 375 aa20.9■□□□□ 0.94
RTN1-201ENST00000267484 USP26Q9BXU7 913 aa20.9■□□□□ 0.94
RTN1-201ENST00000267484 NUDT16Q96DE0 195 aaKnown RBP20.89■□□□□ 0.93
RTN1-201ENST00000267484 MEIS3Q99687 375 aa20.89■□□□□ 0.93
RTN1-201ENST00000267484 SDSP20132 328 aa20.89■□□□□ 0.93
RTN1-201ENST00000267484 ZGPATQ8N5A5 531 aaKnown RBP20.88■□□□□ 0.93
RTN1-201ENST00000267484 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
RTN1-201ENST00000267484 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
RTN1-201ENST00000267484 GOLGA6L22H0YM25 854 aa20.87■□□□□ 0.93
RTN1-201ENST00000267484 CEP85Q6P2H3 762 aa20.87■□□□□ 0.93
RTN1-201ENST00000267484 CPS1P31327 1500 aa20.87■□□□□ 0.93
RTN1-201ENST00000267484 ATP7BP35670 1465 aa20.87■□□□□ 0.93
RTN1-201ENST00000267484 FOXD4L5Q5VV16 416 aaPredicted RBP20.87■□□□□ 0.93
RTN1-201ENST00000267484 FOXD4L4Q8WXT5 416 aaPredicted RBP20.87■□□□□ 0.93
RTN1-201ENST00000267484 ISY1Q9ULR0 285 aaKnown RBP20.87■□□□□ 0.93
RTN1-201ENST00000267484 RABEP1Q15276 862 aa20.87■□□□□ 0.93
RTN1-201ENST00000267484 ANKRD44Q8N8A2 993 aa20.87■□□□□ 0.93
RTN1-201ENST00000267484 MSH6P52701 1360 aa20.86■□□□□ 0.93
RTN1-201ENST00000267484 NASPP49321 788 aaPredicted RBP20.86■□□□□ 0.93
RTN1-201ENST00000267484 TSHZ3Q63HK5 1081 aa20.86■□□□□ 0.93
RTN1-201ENST00000267484 CAVIN1Q6NZI2 390 aaKnown RBP20.86■□□□□ 0.93
RTN1-201ENST00000267484 INTS3Q68E01 1043 aaKnown RBP20.85■□□□□ 0.93
RTN1-201ENST00000267484 EDC4Q6P2E9 1401 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms