RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Ubr1O70481 1757 aa20.34■□□□□ 0.85
Trim50-201ENSMUST00000065785 Gnai1B2RSH2 354 aa20.34■□□□□ 0.85
Trim50-201ENSMUST00000065785 Idi1P58044 227 aa20.34■□□□□ 0.85
Trim50-201ENSMUST00000065785 Gnai3Q9DC51 354 aa20.34■□□□□ 0.85
Trim50-201ENSMUST00000065785 Gm10563F6WIE4 79 aa20.33■□□□□ 0.85
Trim50-201ENSMUST00000065785 Eif4a2P10630 407 aa20.33■□□□□ 0.85
Trim50-201ENSMUST00000065785 Sipa1l2Q80TE4 1722 aa20.33■□□□□ 0.85
Trim50-201ENSMUST00000065785 Trim26Q99PN3 545 aa20.32■□□□□ 0.84
Trim50-201ENSMUST00000065785 Scn7aB1AYL1 1681 aa20.31■□□□□ 0.84
Trim50-201ENSMUST00000065785 Ccdc60Q8C4J0 545 aa20.31■□□□□ 0.84
Trim50-201ENSMUST00000065785 Cdc37l1Q9CZP7 335 aa20.31■□□□□ 0.84
Trim50-201ENSMUST00000065785 Sos1Q62245 1319 aa20.3■□□□□ 0.84
Trim50-201ENSMUST00000065785 G3bp1P97855 465 aaKnown RBP20.3■□□□□ 0.84
Trim50-201ENSMUST00000065785 B4galnt3Q6L8S8 986 aa20.3■□□□□ 0.84
Trim50-201ENSMUST00000065785 Evi5lH3BKQ3 813 aa20.3■□□□□ 0.84
Trim50-201ENSMUST00000065785 Stk31Q99MW1 1018 aa20.29■□□□□ 0.84
Trim50-201ENSMUST00000065785 Ap3b2Q9JME5 1082 aa20.29■□□□□ 0.84
Trim50-201ENSMUST00000065785 Slit2Q9R1B9 1521 aa20.29■□□□□ 0.84
Trim50-201ENSMUST00000065785 NgefQ8CHT1 710 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Rlbp1Q9Z275 317 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Wnk3Q80XP9 1757 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Map2P20357 1828 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Vamp4O70480 141 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Hs1bp3Q3TC93 395 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Dennd6aQ8BH65 605 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Cabp2Q9JLK4 216 aa20.27■□□□□ 0.84
Trim50-201ENSMUST00000065785 Nlgn1Q99K10 843 aa20.26■□□□□ 0.83
Trim50-201ENSMUST00000065785 Camta1A2A891 1682 aa20.26■□□□□ 0.83
Trim50-201ENSMUST00000065785 Cavin2Q63918 418 aaKnown RBP20.25■□□□□ 0.83
Trim50-201ENSMUST00000065785 Atl3Q91YH5 541 aa20.25■□□□□ 0.83
Trim50-201ENSMUST00000065785 Frmpd2A0A140LI67 1392 aa20.25■□□□□ 0.83
Trim50-201ENSMUST00000065785 Mcm10Q0VBD2 885 aa20.25■□□□□ 0.83
Trim50-201ENSMUST00000065785 Brinp3Q499E0 766 aa20.25■□□□□ 0.83
Trim50-201ENSMUST00000065785 Dbr1Q923B1 550 aa20.25■□□□□ 0.83
Trim50-201ENSMUST00000065785 Plekhm2Q80TQ5 1018 aa20.23■□□□□ 0.83
Trim50-201ENSMUST00000065785 Sox12Q04890 314 aa20.23■□□□□ 0.83
Trim50-201ENSMUST00000065785 Ano8Q6PB70 1060 aa20.23■□□□□ 0.83
Trim50-201ENSMUST00000065785 Ptpn23Q6PB44 1692 aa20.22■□□□□ 0.83
Trim50-201ENSMUST00000065785 Aldh1l1Q8R0Y6 902 aa20.22■□□□□ 0.83
Trim50-201ENSMUST00000065785 MpripP97434 1024 aa20.21■□□□□ 0.83
Trim50-201ENSMUST00000065785 Ppp1r3fQ9JIG4 799 aa20.21■□□□□ 0.83
Trim50-201ENSMUST00000065785 FancaQ9JL70 1439 aa20.21■□□□□ 0.83
Trim50-201ENSMUST00000065785 Maco1Q7TQE6 664 aaKnown RBP20.2■□□□□ 0.82
Trim50-201ENSMUST00000065785 Atf3Q60765 181 aa20.2■□□□□ 0.82
Trim50-201ENSMUST00000065785 Nsd3Q6P2L6 1439 aa20.2■□□□□ 0.82
Trim50-201ENSMUST00000065785 PtprvP70289 1705 aa20.19■□□□□ 0.82
Trim50-201ENSMUST00000065785 Tmc1Q8R4P5 757 aa20.19■□□□□ 0.82
Trim50-201ENSMUST00000065785 KarsQ99MN1 595 aaKnown RBP20.19■□□□□ 0.82
Trim50-201ENSMUST00000065785 Tmem2Q5FWI3 1383 aa20.19■□□□□ 0.82
Trim50-201ENSMUST00000065785 Q3UPC7 1272 aa20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 Rab11fip3Q8CHD8 1047 aa20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 Cabp4Q8VHC5 271 aa20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 Usp16Q99LG0 825 aa20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 Chmp4bQ9D8B3 224 aaKnown RBP20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 Gm21190A0A0G2JGJ6 266 aa20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 Gm6268A2A3U9 297 aa20.18■□□□□ 0.82
Trim50-201ENSMUST00000065785 TmpoQ61033 693 aaKnown RBP20.17■□□□□ 0.82
Trim50-201ENSMUST00000065785 Trpm3Q5F4S9 1721 aa20.16■□□□□ 0.82
Trim50-201ENSMUST00000065785 Tet3Q8BG87 1668 aa20.16■□□□□ 0.82
Trim50-201ENSMUST00000065785 MarsQ68FL6 902 aaKnown RBP20.15■□□□□ 0.82
Trim50-201ENSMUST00000065785 Parp14Q2EMV9 1817 aa20.14■□□□□ 0.82
Trim50-201ENSMUST00000065785 Ncoa4Q5U4H9 625 aa20.14■□□□□ 0.81
Trim50-201ENSMUST00000065785 Ncapd2Q8K2Z4 1392 aa20.14■□□□□ 0.81
Trim50-201ENSMUST00000065785 Eya1P97767 591 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 MvpQ9EQK5 861 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 Adgrb1Q3UHD1 1582 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 Ppp2r3aB2RXC8 1150 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 Hoxc9P09633 260 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 Kcna6Q61923 529 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 Tmco5bQ80X59 307 aa20.13■□□□□ 0.81
Trim50-201ENSMUST00000065785 Nckap5lQ6GQX2 1323 aa20.12■□□□□ 0.81
Trim50-201ENSMUST00000065785 Hspa1lP16627 641 aa20.12■□□□□ 0.81
Trim50-201ENSMUST00000065785 Ankrd44B2RXR6 993 aa20.11■□□□□ 0.81
Trim50-201ENSMUST00000065785 Gimap6Q8K349 305 aa20.11■□□□□ 0.81
Trim50-201ENSMUST00000065785 Plin1Q8CGN5 517 aa20.11■□□□□ 0.81
Trim50-201ENSMUST00000065785 Ipo8Q7TMY7 1010 aa20.1■□□□□ 0.81
Trim50-201ENSMUST00000065785 Slc35g1Q8BY79 368 aa20.1■□□□□ 0.81
Trim50-201ENSMUST00000065785 Znf330Q922H9 316 aa20.1■□□□□ 0.81
Trim50-201ENSMUST00000065785 DccP70211 1447 aa20.1■□□□□ 0.81
Trim50-201ENSMUST00000065785 Ccdc183A2AJB1 534 aa20.09■□□□□ 0.81
Trim50-201ENSMUST00000065785 Nectin2P32507 530 aa20.09■□□□□ 0.81
Trim50-201ENSMUST00000065785 Nkx1-2P42580 305 aa20.09■□□□□ 0.81
Trim50-201ENSMUST00000065785 U2surpQ6NV83 1029 aaKnown RBP20.09■□□□□ 0.81
Trim50-201ENSMUST00000065785 Robo1O89026 1612 aa20.09■□□□□ 0.81
Trim50-201ENSMUST00000065785 Ecm2Q5FW85 670 aa20.09■□□□□ 0.81
Trim50-201ENSMUST00000065785 Rtf1A2AQ19 715 aaKnown RBP20.08■□□□□ 0.8
Trim50-201ENSMUST00000065785 Chl1P70232 1209 aa20.08■□□□□ 0.8
Trim50-201ENSMUST00000065785 Ccne1Q61457 408 aa20.08■□□□□ 0.8
Trim50-201ENSMUST00000065785 Farp2Q91VS8 1065 aa20.08■□□□□ 0.8
Trim50-201ENSMUST00000065785 Trim30dE9PWL0 497 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 Wwc1Q5SXA9 1104 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 Ppm1gQ61074 542 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 Klhdc4Q921I2 584 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 Bcl11bQ99PV8 884 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 Nfat5Q9WV30 1534 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 Phlpp2Q8BXA7 1320 aa20.07■□□□□ 0.8
Trim50-201ENSMUST00000065785 HypkQ9CR41 129 aa20.06■□□□□ 0.8
Trim50-201ENSMUST00000065785 Ak7Q9D2H2 614 aa20.06■□□□□ 0.8
Trim50-201ENSMUST00000065785 Igsf1Q7TQA1 1317 aa20.06■□□□□ 0.8
Trim50-201ENSMUST00000065785 TimelessQ9R1X4 1197 aa20.06■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms