RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Zscan10Q3URR7 782 aa11.51□□□□□ -0.57
Trim42-201ENSMUST00000035026 Smim5Q8BT42 78 aa11.51□□□□□ -0.57
Trim42-201ENSMUST00000035026 Ncoa4Q5U4H9 625 aa11.5□□□□□ -0.57
Trim42-201ENSMUST00000035026 Cntnap1O54991 1385 aa11.5□□□□□ -0.57
Trim42-201ENSMUST00000035026 PaskQ8CEE6 1383 aa11.5□□□□□ -0.57
Trim42-201ENSMUST00000035026 Cdk12Q14AX6 1484 aaKnown RBP11.5□□□□□ -0.57
Trim42-201ENSMUST00000035026 Slit2Q9R1B9 1521 aa11.5□□□□□ -0.57
Trim42-201ENSMUST00000035026 Ncapd2Q8K2Z4 1392 aa11.5□□□□□ -0.57
Trim42-201ENSMUST00000035026 CemipQ8BI06 1361 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Cypt2Q6P924 180 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Map2P20357 1828 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Nfat5Q9WV30 1534 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Sema6bO54951 886 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Tnnt3Q9QZ47 272 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Robo1O89026 1612 aa11.49□□□□□ -0.57
Trim42-201ENSMUST00000035026 Lrp6O88572 1613 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Nolc1E9Q5C9 702 aaKnown RBP11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Tmed8Q3UHI4 326 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Dzip1Q8BMD2 852 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Gimap6Q8K349 305 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Prdm10Q3UTQ7 1184 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Dennd6aQ8BH65 605 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Nlgn1Q99K10 843 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Tex14Q7M6U3 1450 aa11.48□□□□□ -0.57
Trim42-201ENSMUST00000035026 Nid2O88322 1403 aa11.47□□□□□ -0.57
Trim42-201ENSMUST00000035026 Fnbp4Q6ZQ03 1031 aa11.47□□□□□ -0.57
Trim42-201ENSMUST00000035026 Dcaf11Q91VU6 549 aa11.47□□□□□ -0.57
Trim42-201ENSMUST00000035026 Arhgef1Q61210 920 aaKnown RBP11.46□□□□□ -0.57
Trim42-201ENSMUST00000035026 Acsbg1Q99PU5 721 aa11.46□□□□□ -0.57
Trim42-201ENSMUST00000035026 IbtkQ6ZPR6 1352 aaKnown RBP11.46□□□□□ -0.57
Trim42-201ENSMUST00000035026 Sh3bp1P55194 680 aa11.46□□□□□ -0.58
Trim42-201ENSMUST00000035026 Sparcl1P70663 650 aa11.46□□□□□ -0.58
Trim42-201ENSMUST00000035026 Nckap5lQ6GQX2 1323 aa11.46□□□□□ -0.58
Trim42-201ENSMUST00000035026 Gm21190A0A0G2JGJ6 266 aa11.45□□□□□ -0.58
Trim42-201ENSMUST00000035026 Lrrc59Q922Q8 307 aaKnown RBP11.45□□□□□ -0.58
Trim42-201ENSMUST00000035026 Cdhr2E9Q7P9 1308 aa11.45□□□□□ -0.58
Trim42-201ENSMUST00000035026 Kiaa1211Q5PR69 1207 aa11.44□□□□□ -0.58
Trim42-201ENSMUST00000035026 Kif7B7ZNG0 1348 aa11.44□□□□□ -0.58
Trim42-201ENSMUST00000035026 Hsp90aa1P07901 733 aaKnown RBP11.44□□□□□ -0.58
Trim42-201ENSMUST00000035026 FancaQ9JL70 1439 aa11.44□□□□□ -0.58
Trim42-201ENSMUST00000035026 Ano8Q6PB70 1060 aa11.43□□□□□ -0.58
Trim42-201ENSMUST00000035026 MypopQ8R4U1 393 aa11.43□□□□□ -0.58
Trim42-201ENSMUST00000035026 Txnrd1Q9JMH6 613 aa11.43□□□□□ -0.58
Trim42-201ENSMUST00000035026 ZgpatQ8VDM1 511 aa11.43□□□□□ -0.58
Trim42-201ENSMUST00000035026 TnrQ8BYI9 1358 aa11.42□□□□□ -0.58
Trim42-201ENSMUST00000035026 Hoxb7P09024 217 aa11.42□□□□□ -0.58
Trim42-201ENSMUST00000035026 4933416C03RikQ3V063 378 aa11.42□□□□□ -0.58
Trim42-201ENSMUST00000035026 Ggt6Q6PDE7 497 aa11.42□□□□□ -0.58
Trim42-201ENSMUST00000035026 Kcnh5Q920E3 988 aa11.42□□□□□ -0.58
Trim42-201ENSMUST00000035026 Ddx54Q8K4L0 874 aaKnown RBP11.41□□□□□ -0.58
Trim42-201ENSMUST00000035026 Gm21698A0A087WQP8 267 aa11.41□□□□□ -0.58
Trim42-201ENSMUST00000035026 Gm21671G3UY31 267 aa11.41□□□□□ -0.58
Trim42-201ENSMUST00000035026 Cabp4Q8VHC5 271 aa11.41□□□□□ -0.58
Trim42-201ENSMUST00000035026 Emilin2Q8K482 1074 aa11.4□□□□□ -0.59
Trim42-201ENSMUST00000035026 Dnajc10Q9DC23 793 aa11.4□□□□□ -0.59
Trim42-201ENSMUST00000035026 Ppp6r1Q7TSI3 856 aa11.39□□□□□ -0.59
Trim42-201ENSMUST00000035026 Shank2Q80Z38 1476 aa11.39□□□□□ -0.59
Trim42-201ENSMUST00000035026 Birc3O08863 600 aa11.38□□□□□ -0.59
Trim42-201ENSMUST00000035026 Card10P58660 1021 aa11.38□□□□□ -0.59
Trim42-201ENSMUST00000035026 Cnksr2Q80YA9 1032 aa11.38□□□□□ -0.59
Trim42-201ENSMUST00000035026 Pard3Q99NH2 1333 aa11.38□□□□□ -0.59
Trim42-201ENSMUST00000035026 Fmnl2A2APV2 1086 aa11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 HdgfP51859 237 aaKnown RBP11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 Ptpn23Q6PB44 1692 aa11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 Cald1E9QA15 768 aaKnown RBP11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 Hsp90b1P08113 802 aaKnown RBP11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 Slx1bQ8BX32 270 aa11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 TatQ8QZR1 454 aa11.37□□□□□ -0.59
Trim42-201ENSMUST00000035026 ChgaP26339 463 aaKnown RBP11.36□□□□□ -0.59
Trim42-201ENSMUST00000035026 Tnrc6cQ3UHC0 1690 aaKnown RBP11.36□□□□□ -0.59
Trim42-201ENSMUST00000035026 FocadA2AKG8 1798 aa11.36□□□□□ -0.59
Trim42-201ENSMUST00000035026 Trim28Q62318 834 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Rad17Q6NXW6 688 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Amotl2Q8K371 772 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 PtmaP26350 111 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Nom1Q3UFM5 854 aaKnown RBP11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Tmem132eQ6IEE6 982 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Ppp2r1aQ76MZ3 589 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Rab3gap2Q8BMG7 1366 aa11.35□□□□□ -0.59
Trim42-201ENSMUST00000035026 Hoxc9P09633 260 aa11.34□□□□□ -0.59
Trim42-201ENSMUST00000035026 Fbln2P37889 1221 aa11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 Nol11Q8BJW5 723 aaKnown RBP11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 P2rx7Q9Z1M0 595 aa11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 Fer1l6E0CZ42 1862 aa11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 Slit1Q80TR4 1531 aa11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 Parp14Q2EMV9 1817 aa11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 Cacna1sQ02789 1880 aa11.33□□□□□ -0.6
Trim42-201ENSMUST00000035026 Uhrf1bp1lA2RSJ4 1457 aa11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 InhbeO08717 350 aa11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 GapdhsQ64467 440 aa11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 Eno4Q8C042 619 aa11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 Psrc1Q9D0P7 329 aa11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 Kat6bQ8BRB7 1872 aa11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 SetQ9EQU5 289 aaKnown RBP11.32□□□□□ -0.6
Trim42-201ENSMUST00000035026 RgmbQ7TQ33 436 aa11.31□□□□□ -0.6
Trim42-201ENSMUST00000035026 Ltbp1Q8CG19 1712 aa11.31□□□□□ -0.6
Trim42-201ENSMUST00000035026 Ppp1r15aP17564 657 aa11.31□□□□□ -0.6
Trim42-201ENSMUST00000035026 Dmrt2Q8BG36 561 aa11.31□□□□□ -0.6
Trim42-201ENSMUST00000035026 Mak16Q8BGS0 296 aaKnown RBP11.31□□□□□ -0.6
Trim42-201ENSMUST00000035026 Mast2Q60592 1734 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms