RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Dbr1Q923B1 550 aa18.59■□□□□ 0.57
Tpm3-201ENSMUST00000029549 Eif4a2P10630 407 aa18.58■□□□□ 0.57
Tpm3-201ENSMUST00000029549 Cdk12Q14AX6 1484 aaKnown RBP18.58■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ccdc60Q8C4J0 545 aa18.58■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ipo9Q91YE6 1041 aa18.58■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Brinp3Q499E0 766 aa18.57■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Pik3c2aQ61194 1686 aa18.56■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Mcm10Q0VBD2 885 aa18.56■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Bcl11bQ99PV8 884 aa18.56■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Cdc37l1Q9CZP7 335 aa18.56■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Iqcf3Q9D498 203 aa18.56■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Col16a1Q8BLX7 1580 aa18.56■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Gnai1B2RSH2 354 aa18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Hspa1lP16627 641 aa18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 G3bp1P97855 465 aaKnown RBP18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ddx17Q501J6 650 aaKnown RBP18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Gnai3Q9DC51 354 aa18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Cabp2Q9JLK4 216 aa18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ecm2Q5FW85 670 aa18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ap3b2Q9JME5 1082 aa18.55■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Rlbp1Q9Z275 317 aa18.54■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ubr1O70481 1757 aa18.54■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Stk31Q99MW1 1018 aa18.53■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Dennd6aQ8BH65 605 aa18.53■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Zfp777B9EKF4 885 aa18.52■□□□□ 0.56
Tpm3-201ENSMUST00000029549 MpripP97434 1024 aa18.52■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Ppp1r3fQ9JIG4 799 aa18.52■□□□□ 0.56
Tpm3-201ENSMUST00000029549 Vamp4O70480 141 aa18.51■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Nlgn1Q99K10 843 aa18.51■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Map2P20357 1828 aa18.5■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Frmpd2A0A140LI67 1392 aa18.5■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Gm6268A2A3U9 297 aa18.49■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Plekhm2Q80TQ5 1018 aa18.49■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Plin1Q8CGN5 517 aa18.49■□□□□ 0.55
Tpm3-201ENSMUST00000029549 GnpatP98192 678 aa18.48■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Atf3Q60765 181 aa18.48■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Maco1Q7TQE6 664 aaKnown RBP18.48■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Sos1Q62245 1319 aa18.48■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Camta1A2A891 1682 aa18.48■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Scn7aB1AYL1 1681 aa18.48■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Cabp4Q8VHC5 271 aa18.47■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Rad17Q6NXW6 688 aa18.47■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Gm21190A0A0G2JGJ6 266 aa18.46■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Scaf1Q5U4C3 1256 aaKnown RBP18.46■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Usp16Q99LG0 825 aa18.46■□□□□ 0.55
Tpm3-201ENSMUST00000029549 FancaQ9JL70 1439 aa18.46■□□□□ 0.55
Tpm3-201ENSMUST00000029549 Tmco5bQ80X59 307 aa18.45■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Slc35g1Q8BY79 368 aa18.45■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Aldh1l1Q8R0Y6 902 aa18.45■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Atl3Q91YH5 541 aa18.45■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Znf330Q922H9 316 aa18.45■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Parp14Q2EMV9 1817 aa18.44■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Rangap1P46061 589 aaKnown RBP18.44■□□□□ 0.54
Tpm3-201ENSMUST00000029549 KarsQ99MN1 595 aaKnown RBP18.44■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Nsd3Q6P2L6 1439 aa18.44■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Q3UPC7 1272 aa18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Nckap5lQ6GQX2 1323 aa18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Nectin2P32507 530 aa18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Hs1bp3Q3TC93 395 aa18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 TmpoQ61033 693 aaKnown RBP18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Cavin2Q63918 418 aaKnown RBP18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Slit2Q9R1B9 1521 aa18.43■□□□□ 0.54
Tpm3-201ENSMUST00000029549 U2surpQ6NV83 1029 aaKnown RBP18.42■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Armcx1Q9CX83 456 aa18.42■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Tmem2Q5FWI3 1383 aa18.42■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Ano8Q6PB70 1060 aa18.41■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Wnk3Q80XP9 1757 aa18.41■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Eya1P97767 591 aa18.41■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Senp3Q9EP97 568 aaKnown RBP18.4■□□□□ 0.54
Tpm3-201ENSMUST00000029549 PtprvP70289 1705 aa18.39■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Klhdc4Q921I2 584 aa18.39■□□□□ 0.54
Tpm3-201ENSMUST00000029549 Ptpn23Q6PB44 1692 aa18.39■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Hoxc9P09633 260 aa18.39■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Nutm1Q8BHP2 1126 aa18.39■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Trim30dE9PWL0 497 aa18.38■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Farp2Q91VS8 1065 aa18.38■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ppp2r3aB2RXC8 1150 aa18.38■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Chmp4bQ9D8B3 224 aaKnown RBP18.38■□□□□ 0.53
Tpm3-201ENSMUST00000029549 MvpQ9EQK5 861 aa18.38■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ccne1Q61457 408 aa18.37■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Gimap5Q8BWF2 308 aa18.37■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Rab11fip3Q8CHD8 1047 aa18.37■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Cluap1Q8R3P7 413 aa18.37■□□□□ 0.53
Tpm3-201ENSMUST00000029549 MarsQ68FL6 902 aaKnown RBP18.37■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ipo8Q7TMY7 1010 aa18.36■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ncapd2Q8K2Z4 1392 aa18.36■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ccdc183A2AJB1 534 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 ChgaP26339 463 aaKnown RBP18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ncoa4Q5U4H9 625 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ak7Q9D2H2 614 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Rtf1A2AQ19 715 aaKnown RBP18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Ankrd44B2RXR6 993 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 AU019823E9PUQ3 292 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 4930567H17RikQ3V0K5 233 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Kcna6Q61923 529 aa18.35■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Nkx1-2P42580 305 aa18.34■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Tmc1Q8R4P5 757 aa18.34■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Tet3Q8BG87 1668 aa18.34■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Gimap6Q8K349 305 aa18.34■□□□□ 0.53
Tpm3-201ENSMUST00000029549 Trpm3Q5F4S9 1721 aa18.34■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms