RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W AFG3P39925 761 aa6.53□□□□□ -1.36
SSO1YPL232W VAB2P40003 282 aa6.53□□□□□ -1.36
SSO1YPL232W IOC4Q04213 475 aa6.53□□□□□ -1.36
SSO1YPL232W YOR238WQ08634 303 aa6.53□□□□□ -1.36
SSO1YPL232W MDM20Q12387 796 aaKnown RBP6.53□□□□□ -1.36
SSO1YPL232W TUB2P02557 457 aaKnown RBP6.52□□□□□ -1.37
SSO1YPL232W MST1P07236 462 aa6.52□□□□□ -1.37
SSO1YPL232W DIT2P21595 489 aa6.52□□□□□ -1.37
SSO1YPL232W MSC7P38694 644 aa6.52□□□□□ -1.37
SSO1YPL232W LYS14P40971 790 aa6.52□□□□□ -1.37
SSO1YPL232W HXT10P43581 546 aa6.52□□□□□ -1.37
SSO1YPL232W YJL007CP47080 104 aa6.52□□□□□ -1.37
SSO1YPL232W TOR1P35169 2470 aa6.51□□□□□ -1.37
SSO1YPL232W SRS2P12954 1174 aa6.51□□□□□ -1.37
SSO1YPL232W MXR1P40029 184 aa6.51□□□□□ -1.37
SSO1YPL232W BRE5P53741 515 aaKnown RBP6.51□□□□□ -1.37
SSO1YPL232W SNU66Q12420 587 aaPredicted RBP6.51□□□□□ -1.37
SSO1YPL232W AI2P03876 854 aa6.5□□□□□ -1.37
SSO1YPL232W HIP1P06775 603 aa6.5□□□□□ -1.37
SSO1YPL232W PRE10P21242 288 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SSO1YPL232W YHR131CP38835 850 aa6.5□□□□□ -1.37
SSO1YPL232W UBP12P39538 1254 aa6.5□□□□□ -1.37
SSO1YPL232W GLO3P38682 493 aaKnown RBP6.49□□□□□ -1.37
SSO1YPL232W YGR122WP53272 402 aa6.49□□□□□ -1.37
SSO1YPL232W HEF3P53978 1044 aaKnown RBP6.49□□□□□ -1.37
SSO1YPL232W MET7Q08645 548 aa6.49□□□□□ -1.37
SSO1YPL232W PCL8Q08966 492 aa6.49□□□□□ -1.37
SSO1YPL232W MAM3Q12296 706 aa6.49□□□□□ -1.37
SSO1YPL232W TOR2P32600 2474 aaKnown RBP6.49□□□□□ -1.37
SSO1YPL232W KIN1P13185 1064 aa6.48□□□□□ -1.37
SSO1YPL232W PTK1P36002 662 aaPredicted RBP6.48□□□□□ -1.37
SSO1YPL232W TFA1P36100 482 aa6.48□□□□□ -1.37
SSO1YPL232W YBL028CP38202 106 aa6.48□□□□□ -1.37
SSO1YPL232W MSH4P40965 878 aaPredicted RBP6.48□□□□□ -1.37
SSO1YPL232W NOP2P40991 618 aaKnown RBP6.48□□□□□ -1.37
SSO1YPL232W YJR107WP47145 328 aa6.48□□□□□ -1.37
SSO1YPL232W NSG2P53898 299 aa6.48□□□□□ -1.37
SSO1YPL232W YBL029C-AQ3E756 94 aa6.48□□□□□ -1.37
SSO1YPL232W MOT1P32333 1867 aa6.47□□□□□ -1.37
SSO1YPL232W PKC1P24583 1151 aa6.47□□□□□ -1.37
SSO1YPL232W EUG1P32474 517 aa6.47□□□□□ -1.37
SSO1YPL232W BCS1P32839 456 aa6.47□□□□□ -1.37
SSO1YPL232W KSP1P38691 1029 aaKnown RBP6.47□□□□□ -1.37
SSO1YPL232W YIR042CP40586 236 aa6.47□□□□□ -1.37
SSO1YPL232W MPP10P47083 593 aaKnown RBP6.47□□□□□ -1.37
SSO1YPL232W SUB2Q07478 446 aaKnown RBP6.47□□□□□ -1.37
SSO1YPL232W FAB1P34756 2278 aa6.46□□□□□ -1.37
SSO1YPL232W SPB4P25808 606 aaPredicted RBP6.46□□□□□ -1.38
SSO1YPL232W SWC3P31376 625 aa6.46□□□□□ -1.38
SSO1YPL232W MDL2P33311 773 aa6.46□□□□□ -1.38
SSO1YPL232W YAP5P40574 245 aa6.46□□□□□ -1.38
SSO1YPL232W SNU71P53207 620 aaKnown RBP6.46□□□□□ -1.38
SSO1YPL232W YNR014WP53719 212 aa6.46□□□□□ -1.38
SSO1YPL232W UBX5Q06682 500 aa6.46□□□□□ -1.38
SSO1YPL232W PER1P25625 357 aa6.45□□□□□ -1.38
SSO1YPL232W INM2Q05533 292 aa6.45□□□□□ -1.38
SSO1YPL232W MIP1P15801 1254 aa6.44□□□□□ -1.38
SSO1YPL232W RAD24P32641 659 aa6.44□□□□□ -1.38
SSO1YPL232W RGT1P32862 1170 aa6.44□□□□□ -1.38
SSO1YPL232W KTR2P33550 425 aa6.44□□□□□ -1.38
SSO1YPL232W YDL124WQ07551 312 aaKnown RBP6.44□□□□□ -1.38
SSO1YPL232W VMA2P16140 517 aaKnown RBP6.43□□□□□ -1.38
SSO1YPL232W GRS1P38088 690 aaKnown RBP6.43□□□□□ -1.38
SSO1YPL232W HAL5P38970 855 aaKnown RBP6.43□□□□□ -1.38
SSO1YPL232W TIF4631P39935 952 aaKnown RBP6.43□□□□□ -1.38
SSO1YPL232W BOI2P39969 1040 aa6.43□□□□□ -1.38
SSO1YPL232W LDB19Q12502 818 aa6.43□□□□□ -1.38
SSO1YPL232W TPD3P31383 635 aa6.42□□□□□ -1.38
SSO1YPL232W GPB2P39717 880 aa6.42□□□□□ -1.38
SSO1YPL232W DUS4Q06063 367 aa6.42□□□□□ -1.38
SSO1YPL232W MYO1P08964 1928 aa6.42□□□□□ -1.38
SSO1YPL232W PIF1P07271 859 aa6.41□□□□□ -1.38
SSO1YPL232W MPH3P0CE00 602 aa6.41□□□□□ -1.38
SSO1YPL232W SEC18P18759 758 aaKnown RBP6.41□□□□□ -1.38
SSO1YPL232W DBP1P24784 617 aaKnown RBP6.41□□□□□ -1.38
SSO1YPL232W NPL4P33755 580 aa6.41□□□□□ -1.38
SSO1YPL232W CST26P38226 397 aa6.41□□□□□ -1.38
SSO1YPL232W YML037CQ03703 340 aa6.41□□□□□ -1.38
SSO1YPL232W GYP5Q12344 894 aa6.41□□□□□ -1.38
SSO1YPL232W ERG12P07277 443 aa6.4□□□□□ -1.38
SSO1YPL232W KRS1P15180 591 aaKnown RBP6.4□□□□□ -1.38
SSO1YPL232W VNX1P42839 908 aa6.4□□□□□ -1.38
SSO1YPL232W PIP2P52960 996 aa6.4□□□□□ -1.38
SSO1YPL232W YAF9P53930 226 aa6.4□□□□□ -1.38
SSO1YPL232W NOP8Q08287 484 aaPredicted RBP6.4□□□□□ -1.38
SSO1YPL232W LAP2Q10740 671 aa6.4□□□□□ -1.38
SSO1YPL232W HEM1P09950 548 aaPredicted RBP6.39□□□□□ -1.39
SSO1YPL232W SLA1P32790 1244 aa6.39□□□□□ -1.39
SSO1YPL232W BOI1P38041 980 aaKnown RBP6.39□□□□□ -1.39
SSO1YPL232W NOC2P39744 710 aaKnown RBP6.39□□□□□ -1.39
SSO1YPL232W RRI2Q12348 645 aa6.39□□□□□ -1.39
SSO1YPL232W YDR524C-BQ3E6R4 66 aa6.39□□□□□ -1.39
SSO1YPL232W CYB2P00175 591 aa6.38□□□□□ -1.39
SSO1YPL232W IRE1P32361 1115 aa6.38□□□□□ -1.39
SSO1YPL232W PTK2P47116 818 aaKnown RBP6.38□□□□□ -1.39
SSO1YPL232W YNL193WP53870 558 aa6.38□□□□□ -1.39
SSO1YPL232W KEL3Q08979 651 aaPredicted RBP6.38□□□□□ -1.39
SSO1YPL232W DAP1Q12091 152 aa6.38□□□□□ -1.39
SSO1YPL232W NUM1Q00402 2748 aa6.37□□□□□ -1.39
SSO1YPL232W FUN12P39730 1002 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms