RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	RPN7	Q06103	429 aa	Known RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	DIB1	Q06819	143 aa	Predicted RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	BDF2	Q07442	638 aa		7.17	□□□□□ -1.26
WHI2	YOR043W	RAD54	P32863	898 aa		7.17	□□□□□ -1.26
WHI2	YOR043W	AAP1	P37898	856 aa	Known RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	ADR1	P07248	1323 aa		7.16	□□□□□ -1.26
WHI2	YOR043W	UGA2	P38067	497 aa		7.16	□□□□□ -1.26
WHI2	YOR043W	PBY1	P38254	753 aa		7.16	□□□□□ -1.26
WHI2	YOR043W	STM1	P39015	273 aa	Known RBP	7.16	□□□□□ -1.26
WHI2	YOR043W	SYF1	Q04048	859 aa	Predicted RBP	7.16	□□□□□ -1.26
WHI2	YOR043W	THI3	Q07471	609 aa		7.16	□□□□□ -1.26
WHI2	YOR043W	RRI2	Q12348	645 aa		7.16	□□□□□ -1.26
WHI2	YOR043W	SRS2	P12954	1174 aa		7.15	□□□□□ -1.27
WHI2	YOR043W	CAF20	P12962	161 aa	Known RBP	7.15	□□□□□ -1.27
WHI2	YOR043W	KRI1	P42846	591 aa	Known RBP	7.15	□□□□□ -1.27
WHI2	YOR043W	EAF7	P53911	425 aa	Known RBP	7.15	□□□□□ -1.27
WHI2	YOR043W	MGM1	P32266	881 aa		7.14	□□□□□ -1.27
WHI2	YOR043W	FRD1	P32614	470 aa	Known RBP	7.14	□□□□□ -1.27
WHI2	YOR043W	STR2	P47164	639 aa		7.14	□□□□□ -1.27
WHI2	YOR043W	IRC3	Q06683	689 aa		7.14	□□□□□ -1.27
WHI2	YOR043W	YRR1	Q12172	810 aa		7.14	□□□□□ -1.27
WHI2	YOR043W	DPH6	Q12429	685 aa		7.14	□□□□□ -1.27
WHI2	YOR043W	TRL1	P09880	827 aa	Known RBP	7.13	□□□□□ -1.27
WHI2	YOR043W	RNR2	P09938	399 aa	Known RBP	7.13	□□□□□ -1.27
WHI2	YOR043W	VPS24	P36095	224 aa	Known RBP	7.13	□□□□□ -1.27
WHI2	YOR043W	RPN1	P38764	993 aa	Known RBP	7.13	□□□□□ -1.27
WHI2	YOR043W	HAL5	P38970	855 aa	Known RBP	7.13	□□□□□ -1.27
WHI2	YOR043W	ICP55	P40051	511 aa		7.13	□□□□□ -1.27
WHI2	YOR043W	DJP1	P40564	432 aa		7.13	□□□□□ -1.27
WHI2	YOR043W	CWH41	P53008	833 aa		7.13	□□□□□ -1.27
WHI2	YOR043W	POM152	P39685	1337 aa		7.13	□□□□□ -1.27
WHI2	YOR043W	DUR1,2	P32528	1835 aa	Known RBP	7.12	□□□□□ -1.27
WHI2	YOR043W	PIF1	P07271	859 aa		7.11	□□□□□ -1.27
WHI2	YOR043W	GLO3	P38682	493 aa	Known RBP	7.11	□□□□□ -1.27
WHI2	YOR043W	OSH3	P38713	996 aa	Known RBP	7.11	□□□□□ -1.27
WHI2	YOR043W	NUG1	P40010	520 aa	Known RBP	7.11	□□□□□ -1.27
WHI2	YOR043W	YMR147W	P40218	223 aa	Known RBP	7.11	□□□□□ -1.27
WHI2	YOR043W	SIT4	P20604	311 aa		7.11	□□□□□ -1.27
WHI2	YOR043W	PFF1	P38244	976 aa		7.11	□□□□□ -1.27
WHI2	YOR043W	ISM1	P48526	1002 aa		7.11	□□□□□ -1.27
WHI2	YOR043W	PEX21	P50091	288 aa		7.11	□□□□□ -1.27
WHI2	YOR043W	RPT4	P53549	437 aa	Known RBP	7.11	□□□□□ -1.27
WHI2	YOR043W	VPS20	Q04272	221 aa		7.11	□□□□□ -1.27
WHI2	YOR043W	LSP1	Q12230	341 aa	Known RBP	7.11	□□□□□ -1.27
WHI2	YOR043W	PMD1	P32634	1753 aa		7.1	□□□□□ -1.27
WHI2	YOR043W	TPM1	P17536	199 aa	Known RBP	7.1	□□□□□ -1.27
WHI2	YOR043W	OPI1	P21957	404 aa		7.1	□□□□□ -1.27
WHI2	YOR043W	SPL2	P38839	148 aa		7.1	□□□□□ -1.27
WHI2	YOR043W	YIR042C	P40586	236 aa		7.1	□□□□□ -1.27
WHI2	YOR043W	KRE2	P27809	442 aa		7.09	□□□□□ -1.27
WHI2	YOR043W	SMY1	P32364	656 aa	Known RBP	7.09	□□□□□ -1.27
WHI2	YOR043W	CIC1	P38779	376 aa	Known RBP	7.09	□□□□□ -1.27
WHI2	YOR043W	AIM9	P40053	627 aa	Known RBP	7.09	□□□□□ -1.27
WHI2	YOR043W	NPA3	P47122	385 aa		7.09	□□□□□ -1.27
WHI2	YOR043W	INM2	Q05533	292 aa		7.09	□□□□□ -1.27
WHI2	YOR043W	PGA3	Q12746	312 aa	Known RBP	7.09	□□□□□ -1.27
WHI2	YOR043W	SNF7	P39929	240 aa	Known RBP	7.08	□□□□□ -1.28
WHI2	YOR043W	MSN5	P52918	1224 aa		7.08	□□□□□ -1.28
WHI2	YOR043W	YGL081W	P53156	320 aa		7.08	□□□□□ -1.28
WHI2	YOR043W	IRC4	Q03036	179 aa		7.08	□□□□□ -1.28
WHI2	YOR043W	PKH3	Q03306	898 aa	Predicted RBP	7.08	□□□□□ -1.28
WHI2	YOR043W	LAM4	P38800	1345 aa		7.08	□□□□□ -1.28
WHI2	YOR043W	LCB1	P25045	558 aa	Known RBP	7.07	□□□□□ -1.28
WHI2	YOR043W	NUD1	P32336	851 aa		7.07	□□□□□ -1.28
WHI2	YOR043W	RPT3	P33298	428 aa	Known RBP	7.07	□□□□□ -1.28
WHI2	YOR043W	GRX7	P38068	203 aa		7.07	□□□□□ -1.28
WHI2	YOR043W	SPO22	P40511	975 aa		7.07	□□□□□ -1.28
WHI2	YOR043W	ENP2	P48234	707 aa	Known RBP	7.07	□□□□□ -1.28
WHI2	YOR043W	ERO1	Q03103	563 aa		7.07	□□□□□ -1.28
WHI2	YOR043W	TAH18	Q12181	623 aa		7.07	□□□□□ -1.28
WHI2	YOR043W	CLC1	P17891	233 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	ROX1	P25042	368 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	MSP1	P28737	362 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	MET22	P32179	357 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	VID28	P40547	921 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	ARP5	P53946	755 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	KAR5	Q04746	504 aa		7.06	□□□□□ -1.28
WHI2	YOR043W	CDC4	P07834	779 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	RPL19A	P0CX82	189 aa	Known RBP	7.05	□□□□□ -1.28
WHI2	YOR043W	RPL19B	P0CX83	189 aa	Predicted RBP	7.05	□□□□□ -1.28
WHI2	YOR043W	BIK1	P11709	440 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	IMP2'	P32351	346 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	YKL222C	P35995	705 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	MET1	P36150	593 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	ERT1	P38140	529 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	IRC8	P47046	822 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	EAF6	P47128	113 aa		7.05	□□□□□ -1.28
WHI2	YOR043W	ESF1	Q06344	628 aa	Known RBP	7.05	□□□□□ -1.28
WHI2	YOR043W	CYB2	P00175	591 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	RET1	P22276	1149 aa	Known RBP	7.04	□□□□□ -1.28
WHI2	YOR043W	PTK1	P36002	662 aa	Predicted RBP	7.04	□□□□□ -1.28
WHI2	YOR043W	PPM2	Q08282	695 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	SSF2	Q12153	453 aa	Predicted RBP	7.04	□□□□□ -1.28
WHI2	YOR043W	PEP3	P27801	918 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	SPT16	P32558	1035 aa	Known RBP	7.04	□□□□□ -1.28
WHI2	YOR043W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.04	□□□□□ -1.28	not detected
WHI2	YOR043W	BOI1	P38041	980 aa	Known RBP	7.04	□□□□□ -1.28
WHI2	YOR043W	BDH2	P39713	417 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	YFH7	P43591	353 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	IOC3	P43596	787 aa		7.04	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms