RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W FBP1P09201 348 aa12.85□□□□□ -0.35
PRE6YOL038W ERG7P38604 731 aa12.85□□□□□ -0.35
PRE6YOL038W YMR147WP40218 223 aaKnown RBP12.85□□□□□ -0.35
PRE6YOL038W NOP2P40991 618 aaKnown RBP12.85□□□□□ -0.35
PRE6YOL038W PIB2P53191 635 aa12.85□□□□□ -0.35
PRE6YOL038W NCB2Q92317 146 aa12.85□□□□□ -0.35
PRE6YOL038W YDL124WQ07551 312 aaKnown RBP12.84□□□□□ -0.35
PRE6YOL038W KEL3Q08979 651 aaPredicted RBP12.84□□□□□ -0.35
PRE6YOL038W ECM29P38737 1868 aa12.82□□□□□ -0.36
PRE6YOL038W OCT1P35999 772 aa12.82□□□□□ -0.36
PRE6YOL038W MSH4P40965 878 aaPredicted RBP12.82□□□□□ -0.36
PRE6YOL038W NET1P47035 1189 aa12.82□□□□□ -0.36
PRE6YOL038W KRS1P15180 591 aaKnown RBP12.81□□□□□ -0.36
PRE6YOL038W KAR5Q04746 504 aa12.81□□□□□ -0.36
PRE6YOL038W ECM21P38167 1117 aaKnown RBP12.8□□□□□ -0.36
PRE6YOL038W NMD2P38798 1089 aaKnown RBP12.8□□□□□ -0.36
PRE6YOL038W TIF4631P39935 952 aaKnown RBP12.8□□□□□ -0.36
PRE6YOL038W MLC1P53141 149 aa12.8□□□□□ -0.36
PRE6YOL038W PDR18P53756 1333 aa12.8□□□□□ -0.36
PRE6YOL038W YJL007CP47080 104 aa12.79□□□□□ -0.36
PRE6YOL038W CFT2Q12102 859 aaPredicted RBP12.79□□□□□ -0.36
PRE6YOL038W YHL050CP38721 697 aa12.78□□□□□ -0.36
PRE6YOL038W ULP1Q02724 621 aa12.78□□□□□ -0.36
PRE6YOL038W LAP2Q10740 671 aa12.78□□□□□ -0.36
PRE6YOL038W TFA1P36100 482 aa12.77□□□□□ -0.37
PRE6YOL038W CST26P38226 397 aa12.77□□□□□ -0.37
PRE6YOL038W RMD1Q03441 430 aa12.77□□□□□ -0.37
PRE6YOL038W CDC60P26637 1090 aaKnown RBP12.76□□□□□ -0.37
PRE6YOL038W IRC8P47046 822 aa12.76□□□□□ -0.37
PRE6YOL038W MRPS35P53292 345 aa12.76□□□□□ -0.37
PRE6YOL038W LAM4P38800 1345 aa12.76□□□□□ -0.37
PRE6YOL038W MPH3P0CE00 602 aa12.75□□□□□ -0.37
PRE6YOL038W SPB4P25808 606 aaPredicted RBP12.75□□□□□ -0.37
PRE6YOL038W MCD4P36051 919 aa12.75□□□□□ -0.37
PRE6YOL038W PSF2P40359 213 aa12.75□□□□□ -0.37
PRE6YOL038W LYS14P40971 790 aa12.75□□□□□ -0.37
PRE6YOL038W SNU71P53207 620 aaKnown RBP12.75□□□□□ -0.37
PRE6YOL038W PKH3Q03306 898 aaPredicted RBP12.75□□□□□ -0.37
PRE6YOL038W YPL260WQ08977 551 aa12.75□□□□□ -0.37
PRE6YOL038W PRE8P23639 250 aa12.74□□□□□ -0.37
PRE6YOL038W PAH1P32567 862 aa12.74□□□□□ -0.37
PRE6YOL038W IOC3P43596 787 aa12.74□□□□□ -0.37
PRE6YOL038W UBX5Q06682 500 aa12.74□□□□□ -0.37
PRE6YOL038W NPL4P33755 580 aa12.73□□□□□ -0.37
PRE6YOL038W GEF1P37020 779 aa12.73□□□□□ -0.37
PRE6YOL038W BBC1P47068 1157 aa12.73□□□□□ -0.37
PRE6YOL038W YPR117WQ06116 2489 aa12.73□□□□□ -0.37
PRE6YOL038W CHO2P05374 869 aaKnown RBP12.72□□□□□ -0.37
PRE6YOL038W COQ1P18900 473 aa12.72□□□□□ -0.37
PRE6YOL038W PBY1P38254 753 aa12.72□□□□□ -0.37
PRE6YOL038W SRS2P12954 1174 aa12.71□□□□□ -0.37
PRE6YOL038W SRM1P21827 482 aa12.71□□□□□ -0.37
PRE6YOL038W MAL31P38156 614 aa12.71□□□□□ -0.37
PRE6YOL038W VAB2P40003 282 aa12.71□□□□□ -0.37
PRE6YOL038W ATG1P53104 897 aa12.71□□□□□ -0.37
PRE6YOL038W SKG3Q06315 1026 aa12.71□□□□□ -0.37
PRE6YOL038W CHS3P29465 1165 aa12.7□□□□□ -0.38
PRE6YOL038W PRY3P47033 881 aa12.7□□□□□ -0.38
PRE6YOL038W YML037CQ03703 340 aa12.7□□□□□ -0.38
PRE6YOL038W SUB2Q07478 446 aaKnown RBP12.69□□□□□ -0.38
PRE6YOL038W TY3A-GQ12173 290 aa12.69□□□□□ -0.38
PRE6YOL038W TY3A-IQ99219 290 aa12.69□□□□□ -0.38
PRE6YOL038W VID27P40157 782 aa12.68□□□□□ -0.38
PRE6YOL038W CDC16P09798 840 aa12.67□□□□□ -0.38
PRE6YOL038W PRO3P32263 286 aaKnown RBP12.67□□□□□ -0.38
PRE6YOL038W RTS1P38903 757 aa12.67□□□□□ -0.38
PRE6YOL038W VPS62P53285 467 aa12.67□□□□□ -0.38
PRE6YOL038W TAH18Q12181 623 aa12.67□□□□□ -0.38
PRE6YOL038W ERG12P07277 443 aa12.66□□□□□ -0.38
PRE6YOL038W SAM2P19358 384 aaKnown RBP12.66□□□□□ -0.38
PRE6YOL038W PER1P25625 357 aa12.66□□□□□ -0.38
PRE6YOL038W EUG1P32474 517 aa12.66□□□□□ -0.38
PRE6YOL038W RAD61Q99359 647 aa12.66□□□□□ -0.38
PRE6YOL038W DIT2P21595 489 aa12.65□□□□□ -0.38
PRE6YOL038W BRE5P53741 515 aaKnown RBP12.65□□□□□ -0.38
PRE6YOL038W TUS1Q06412 1307 aa12.64□□□□□ -0.39
PRE6YOL038W KTR1P27810 393 aaKnown RBP12.64□□□□□ -0.39
PRE6YOL038W RFC1P38630 861 aaKnown RBP12.64□□□□□ -0.39
PRE6YOL038W AFG3P39925 761 aa12.64□□□□□ -0.39
PRE6YOL038W ACE2P21192 770 aa12.63□□□□□ -0.39
PRE6YOL038W PKC1P24583 1151 aa12.63□□□□□ -0.39
PRE6YOL038W DUS4Q06063 367 aa12.63□□□□□ -0.39
PRE6YOL038W BRE1Q07457 700 aaKnown RBP12.63□□□□□ -0.39
PRE6YOL038W VMA2P16140 517 aaKnown RBP12.62□□□□□ -0.39
PRE6YOL038W OSH3P38713 996 aaKnown RBP12.62□□□□□ -0.39
PRE6YOL038W NKP2Q06162 153 aa12.62□□□□□ -0.39
PRE6YOL038W HDA1P53973 706 aa12.61□□□□□ -0.39
PRE6YOL038W MRD1Q06106 887 aaKnown RBP12.61□□□□□ -0.39
PRE6YOL038W ICL2Q12031 575 aa12.61□□□□□ -0.39
PRE6YOL038W PRE10P21242 288 aaKnown RBP RIP-Chip data12.6□□□□□ -0.39not detected
PRE6YOL038W BCS1P32839 456 aa12.6□□□□□ -0.39
PRE6YOL038W SLN1P39928 1220 aaPredicted RBP12.6□□□□□ -0.39
PRE6YOL038W RPS15Q01855 142 aaKnown RBP12.6□□□□□ -0.39
PRE6YOL038W SUT2Q12286 268 aa12.6□□□□□ -0.39
PRE6YOL038W OPI1P21957 404 aa12.59□□□□□ -0.39
PRE6YOL038W UTR4P32626 227 aa12.59□□□□□ -0.39
PRE6YOL038W LDH1P38139 375 aa12.59□□□□□ -0.39
PRE6YOL038W YOR131CQ12486 218 aa12.59□□□□□ -0.39
PRE6YOL038W MYO1P08964 1928 aa12.58□□□□□ -0.39
PRE6YOL038W RAD18P10862 487 aa12.58□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms