RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	TY1A-OR	P0CX59	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-PR2	P0CX60	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-DR5	P0CX65	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-ER2	P0CX66	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-GR3	P0CX67	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-LR1	P0CX68	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-MR2	P0CX69	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	SEC2	P17065	759 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	GTT3	P39996	337 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-JR2	P47099	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	CDC55	Q00362	526 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-DR1	Q03856	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-ML1	Q04706	440 aa	Known RBP	5.22	□□□□□ -1.57
UBP10	YNL186W	YDL121C	Q07541	149 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	ISU2	Q12056	156 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-BR	Q12217	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-NL2	Q12470	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	TY1A-GR2	Q12485	440 aa		5.22	□□□□□ -1.57
UBP10	YNL186W	PHO8	P11491	566 aa		5.21	□□□□□ -1.57
UBP10	YNL186W	SEC6	P32844	805 aa		5.21	□□□□□ -1.57
UBP10	YNL186W	YFL034W	P43564	1073 aa		5.21	□□□□□ -1.57
UBP10	YNL186W	STR2	P47164	639 aa		5.21	□□□□□ -1.57
UBP10	YNL186W	DNM1	P54861	757 aa		5.21	□□□□□ -1.57
UBP10	YNL186W	GDE1	Q02979	1223 aa		5.21	□□□□□ -1.57
UBP10	YNL186W	YNL011C	P53980	444 aa		5.21	□□□□□ -1.58
UBP10	YNL186W	ALR1	Q08269	859 aa		5.21	□□□□□ -1.58
UBP10	YNL186W	YBT1	P32386	1661 aa		5.21	□□□□□ -1.58
UBP10	YNL186W	PDC1	P06169	563 aa	Known RBP	5.2	□□□□□ -1.58
UBP10	YNL186W	CYT1	P07143	309 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	DUT1	P33317	147 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	YKL069W	P36088	180 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	GRX7	P38068	203 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	ISM1	P48526	1002 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	YGR053C	P53234	283 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	BDS1	Q08347	646 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	MSB4	Q12317	492 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	PRI2	P20457	528 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	RAM1	P22007	431 aa		5.2	□□□□□ -1.58
UBP10	YNL186W	SPF1	P39986	1215 aa	Known RBP	5.2	□□□□□ -1.58
UBP10	YNL186W	CDC34	P14682	295 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	VAC17	P25591	423 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	CRP1	P38845	465 aa	Known RBP	5.19	□□□□□ -1.58
UBP10	YNL186W	TIM54	P47045	478 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	CWH41	P53008	833 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	ITC1	P53125	1264 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	FOL1	P53848	824 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	USO1	P25386	1790 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	RPS6A	P0CX37	236 aa	Known RBP	5.19	□□□□□ -1.58
UBP10	YNL186W	RPS6B	P0CX38	236 aa	Predicted RBP	5.19	□□□□□ -1.58
UBP10	YNL186W	VMA4	P22203	233 aa	Known RBP	5.19	□□□□□ -1.58
UBP10	YNL186W	PAF1	P38351	445 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	CHZ1	P40019	153 aa	Predicted RBP	5.19	□□□□□ -1.58
UBP10	YNL186W	SAM37	P50110	327 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	FOX2	Q02207	900 aa	Known RBP	5.19	□□□□□ -1.58
UBP10	YNL186W	OPI10	Q08202	246 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	YLR125W	Q12138	136 aa		5.19	□□□□□ -1.58
UBP10	YNL186W	CFT1	Q06632	1357 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	SRM1	P21827	482 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	RPA135	P22138	1203 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	FUI1	P38196	639 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	TYW3	P53177	273 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	NAN1	Q02931	896 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	SVL3	Q03088	825 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	ECM16	Q04217	1267 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	NOP14	Q99207	810 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	ERR1	P0CX10	437 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	ERR2	P0CX11	437 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	GAL11	P19659	1081 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	PAC1	P39946	494 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	BOI2	P39969	1040 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	YNR029C	P53729	429 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	NMA111	P53920	997 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	TDA5	Q06417	326 aa	Known RBP	5.18	□□□□□ -1.58
UBP10	YNL186W	OXR1	Q08952	273 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	FLC1	Q08967	793 aa		5.18	□□□□□ -1.58
UBP10	YNL186W	SWI5	P08153	709 aa		5.17	□□□□□ -1.58
UBP10	YNL186W	KAR1	P11927	433 aa		5.17	□□□□□ -1.58
UBP10	YNL186W	PEX8	P53248	589 aa		5.17	□□□□□ -1.58
UBP10	YNL186W	IML1	P47170	1584 aa		5.17	□□□□□ -1.58
UBP10	YNL186W	RSP5	P39940	809 aa	Known RBP	5.16	□□□□□ -1.58
UBP10	YNL186W	SUT1	P53032	299 aa	Known RBP	5.16	□□□□□ -1.58
UBP10	YNL186W	RSC4	Q02206	625 aa		5.16	□□□□□ -1.58
UBP10	YNL186W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
UBP10	YNL186W	BRE1	Q07457	700 aa	Known RBP	5.16	□□□□□ -1.58
UBP10	YNL186W	PRE9	P23638	258 aa	Known RBP	5.16	□□□□□ -1.58
UBP10	YNL186W	MRC1	P25588	1096 aa		5.16	□□□□□ -1.58
UBP10	YNL186W	RAD27	P26793	382 aa		5.16	□□□□□ -1.58
UBP10	YNL186W	THI4	P32318	326 aa		5.16	□□□□□ -1.58
UBP10	YNL186W	VPS24	P36095	224 aa	Known RBP	5.16	□□□□□ -1.58
UBP10	YNL186W	NOC3	Q07896	663 aa	Predicted RBP	5.16	□□□□□ -1.58
UBP10	YNL186W	BCK1	Q01389	1478 aa		5.16	□□□□□ -1.58
UBP10	YNL186W	PWP2	P25635	923 aa	Known RBP	5.15	□□□□□ -1.58
UBP10	YNL186W	CCP1	P00431	361 aa		5.15	□□□□□ -1.59
UBP10	YNL186W	CDC11	P32458	415 aa		5.15	□□□□□ -1.59
UBP10	YNL186W	STE5	P32917	917 aa		5.15	□□□□□ -1.59
UBP10	YNL186W	NPL4	P33755	580 aa		5.15	□□□□□ -1.59
UBP10	YNL186W	HXT5	P38695	592 aa		5.15	□□□□□ -1.59
UBP10	YNL186W	YHL008C	P38750	627 aa		5.15	□□□□□ -1.59
UBP10	YNL186W	CIC1	P38779	376 aa	Known RBP	5.15	□□□□□ -1.59
UBP10	YNL186W	PEX29	Q03370	554 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms