RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C ARG82P07250 355 aa10.59□□□□□ -0.71
SEC61YLR378C ARL1P38116 183 aaKnown RBP10.59□□□□□ -0.71
SEC61YLR378C APL6P46682 809 aa10.59□□□□□ -0.71
SEC61YLR378C RPS15Q01855 142 aaKnown RBP10.59□□□□□ -0.71
SEC61YLR378C KIN4Q01919 800 aa10.59□□□□□ -0.71
SEC61YLR378C DPL1Q05567 589 aa10.59□□□□□ -0.71
SEC61YLR378C MRD1Q06106 887 aaKnown RBP10.59□□□□□ -0.71
SEC61YLR378C EST2Q06163 884 aa10.59□□□□□ -0.71
SEC61YLR378C RRG1Q12167 365 aaPredicted RBP10.59□□□□□ -0.71
SEC61YLR378C MATALPHA2P0CY08 210 aa10.58□□□□□ -0.72
SEC61YLR378C HMLALPHA2P0CY09 210 aa10.58□□□□□ -0.72
SEC61YLR378C RTS1P38903 757 aa10.58□□□□□ -0.72
SEC61YLR378C SET4P42948 560 aa10.58□□□□□ -0.72
SEC61YLR378C PUS6P53294 404 aa10.58□□□□□ -0.72
SEC61YLR378C UFD2P54860 961 aa10.58□□□□□ -0.72
SEC61YLR378C ACK1Q07622 623 aaPredicted RBP10.58□□□□□ -0.72
SEC61YLR378C ELG1Q12050 791 aa10.58□□□□□ -0.72
SEC61YLR378C SNF3P10870 884 aa10.58□□□□□ -0.72
SEC61YLR378C PRX1P34227 261 aaKnown RBP10.58□□□□□ -0.72
SEC61YLR378C HYR1P40581 163 aaKnown RBP10.58□□□□□ -0.72
SEC61YLR378C TOP1P04786 769 aa10.57□□□□□ -0.72
SEC61YLR378C BUD6P41697 788 aa10.57□□□□□ -0.72
SEC61YLR378C ENT3P47160 408 aa10.57□□□□□ -0.72
SEC61YLR378C UBP10P53874 792 aaPredicted RBP10.57□□□□□ -0.72
SEC61YLR378C YPL260WQ08977 551 aa10.57□□□□□ -0.72
SEC61YLR378C MPH3P0CE00 602 aa10.56□□□□□ -0.72
SEC61YLR378C SHC1P39000 512 aa10.56□□□□□ -0.72
SEC61YLR378C ECM23Q02710 187 aa10.56□□□□□ -0.72
SEC61YLR378C GAS5Q08193 484 aa10.56□□□□□ -0.72
SEC61YLR378C KEX1P09620 729 aa10.55□□□□□ -0.72
SEC61YLR378C PFK2P16862 959 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
SEC61YLR378C RSM25P40496 264 aa10.55□□□□□ -0.72
SEC61YLR378C YPL150WQ12152 901 aa10.55□□□□□ -0.72
SEC61YLR378C CPA2P03965 1118 aaKnown RBP10.54□□□□□ -0.72
SEC61YLR378C CHO2P05374 869 aaKnown RBP10.54□□□□□ -0.72
SEC61YLR378C ANP1P32629 500 aa10.54□□□□□ -0.72
SEC61YLR378C CRF1Q04930 467 aa10.54□□□□□ -0.72
SEC61YLR378C PEX19Q07418 342 aa10.54□□□□□ -0.72
SEC61YLR378C RAD61Q99359 647 aa10.54□□□□□ -0.72
SEC61YLR378C ALG2P43636 503 aa10.53□□□□□ -0.72
SEC61YLR378C MSM1P22438 575 aa10.52□□□□□ -0.73
SEC61YLR378C RPS7AP26786 190 aaKnown RBP10.52□□□□□ -0.73
SEC61YLR378C AFG2P32794 780 aa10.52□□□□□ -0.73
SEC61YLR378C RFC5P38251 354 aa10.52□□□□□ -0.73
SEC61YLR378C CIR1P42940 261 aa10.52□□□□□ -0.73
SEC61YLR378C EPL1P43572 832 aa10.52□□□□□ -0.73
SEC61YLR378C SEN54Q02825 467 aaPredicted RBP10.52□□□□□ -0.73
SEC61YLR378C YLR407WQ06070 228 aa10.52□□□□□ -0.73
SEC61YLR378C ETT1Q08421 412 aaKnown RBP10.52□□□□□ -0.73
SEC61YLR378C AIM44Q99299 758 aa10.52□□□□□ -0.73
SEC61YLR378C KEL3Q08979 651 aaPredicted RBP10.51□□□□□ -0.73
SEC61YLR378C MYO3P36006 1272 aa10.5□□□□□ -0.73
SEC61YLR378C YHL050CP38721 697 aa10.5□□□□□ -0.73
SEC61YLR378C AKR1P39010 764 aa10.5□□□□□ -0.73
SEC61YLR378C VID27P40157 782 aa10.5□□□□□ -0.73
SEC61YLR378C TFC6Q06339 672 aa10.5□□□□□ -0.73
SEC61YLR378C PCL8Q08966 492 aa10.5□□□□□ -0.73
SEC61YLR378C HCA4P20448 770 aaKnown RBP10.5□□□□□ -0.73
SEC61YLR378C CBP3P21560 335 aa10.5□□□□□ -0.73
SEC61YLR378C DIT2P21595 489 aa10.5□□□□□ -0.73
SEC61YLR378C RIT1P23796 513 aa10.5□□□□□ -0.73
SEC61YLR378C ELM1P32801 640 aa10.5□□□□□ -0.73
SEC61YLR378C BMH2P34730 273 aaKnown RBP10.5□□□□□ -0.73
SEC61YLR378C MAL31P38156 614 aa10.5□□□□□ -0.73
SEC61YLR378C MAL33P38157 468 aa10.5□□□□□ -0.73
SEC61YLR378C CCT5P40413 562 aaKnown RBP10.5□□□□□ -0.73
SEC61YLR378C MSH4P40965 878 aaPredicted RBP10.5□□□□□ -0.73
SEC61YLR378C ATG20Q07528 640 aa10.5□□□□□ -0.73
SEC61YLR378C APC11Q12157 165 aa10.5□□□□□ -0.73
SEC61YLR378C FLO1P32768 1537 aa10.49□□□□□ -0.73
SEC61YLR378C HSP82P02829 709 aaKnown RBP10.49□□□□□ -0.73
SEC61YLR378C MAK31P23059 88 aa10.49□□□□□ -0.73
SEC61YLR378C RDS1P25611 832 aa10.49□□□□□ -0.73
SEC61YLR378C VPS8P39702 1274 aa10.49□□□□□ -0.73
SEC61YLR378C RVS167P39743 482 aaKnown RBP10.49□□□□□ -0.73
SEC61YLR378C PIL1P53252 339 aaKnown RBP10.49□□□□□ -0.73
SEC61YLR378C NSG2P53898 299 aa10.49□□□□□ -0.73
SEC61YLR378C AAD16Q02895 342 aa10.49□□□□□ -0.73
SEC61YLR378C ISW2Q08773 1120 aa10.49□□□□□ -0.73
SEC61YLR378C PGI1P12709 554 aaKnown RBP10.48□□□□□ -0.73
SEC61YLR378C RPN12P32496 274 aa10.48□□□□□ -0.73
SEC61YLR378C RPN10P38886 268 aaKnown RBP10.48□□□□□ -0.73
SEC61YLR378C PTK2P47116 818 aaKnown RBP10.47□□□□□ -0.73
SEC61YLR378C HDA1P53973 706 aa10.47□□□□□ -0.73
SEC61YLR378C GDE1Q02979 1223 aa10.47□□□□□ -0.73
SEC61YLR378C CLF1Q12309 687 aaPredicted RBP10.47□□□□□ -0.73
SEC61YLR378C SWI4P25302 1093 aaKnown RBP10.46□□□□□ -0.74
SEC61YLR378C FAR11P53917 953 aa10.46□□□□□ -0.74
SEC61YLR378C RPT6Q01939 405 aaKnown RBP10.46□□□□□ -0.74
SEC61YLR378C FLO11P08640 1367 aa10.45□□□□□ -0.74
SEC61YLR378C DID4P36108 232 aa10.45□□□□□ -0.74
SEC61YLR378C PES4P39684 611 aa10.45□□□□□ -0.74
SEC61YLR378C YJL171CP46992 396 aa10.45□□□□□ -0.74
SEC61YLR378C FPK1P53739 893 aa10.45□□□□□ -0.74
SEC61YLR378C SQS1P53866 767 aaKnown RBP10.45□□□□□ -0.74
SEC61YLR378C TRM44Q02648 567 aaKnown RBP10.45□□□□□ -0.74
SEC61YLR378C MYO5Q04439 1219 aaKnown RBP10.45□□□□□ -0.74
SEC61YLR378C RNR3P21672 869 aaKnown RBP10.44□□□□□ -0.74
SEC61YLR378C PRE8P23639 250 aa10.44□□□□□ -0.74
SEC61YLR378C RPL8BP29453 256 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms