RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W MSB1P21339 1137 aaKnown RBP5.35□□□□□ -1.55
SEC22YLR268W EMG1Q06287 252 aaKnown RBP5.35□□□□□ -1.55
SEC22YLR268W FUS1P11710 512 aa5.34□□□□□ -1.55
SEC22YLR268W NCE103P53615 221 aa5.34□□□□□ -1.55
SEC22YLR268W MAE1P36013 669 aaKnown RBP5.33□□□□□ -1.56
SEC22YLR268W TFA2P36145 328 aa5.33□□□□□ -1.56
SEC22YLR268W POL5P39985 1022 aaKnown RBP5.33□□□□□ -1.56
SEC22YLR268W ALD3P54114 506 aa5.33□□□□□ -1.56
SEC22YLR268W FIR1P40020 876 aa5.32□□□□□ -1.56
SEC22YLR268W SPO71Q03868 1245 aa5.32□□□□□ -1.56
SEC22YLR268W AIM46P38885 310 aa5.31□□□□□ -1.56
SEC22YLR268W HXT8P40886 569 aa5.31□□□□□ -1.56
SEC22YLR268W SRS2P12954 1174 aa5.3□□□□□ -1.56
SEC22YLR268W PUN1Q06991 263 aa5.3□□□□□ -1.56
SEC22YLR268W ELG1Q12050 791 aa5.3□□□□□ -1.56
SEC22YLR268W PUP1P25043 261 aa5.29□□□□□ -1.56
SEC22YLR268W UBP5P39944 805 aa5.28□□□□□ -1.56
SEC22YLR268W HVG1P0CE11 249 aa5.27□□□□□ -1.57
SEC22YLR268W BOI1P38041 980 aaKnown RBP5.27□□□□□ -1.57
SEC22YLR268W NTA1P40354 457 aa5.27□□□□□ -1.57
SEC22YLR268W RGD2P43556 714 aa5.27□□□□□ -1.57
SEC22YLR268W APC11Q12157 165 aa5.27□□□□□ -1.57
SEC22YLR268W SEA4P38164 1038 aa5.26□□□□□ -1.57
SEC22YLR268W NIT1P40447 199 aa5.26□□□□□ -1.57
SEC22YLR268W CWC15Q03772 175 aaKnown RBP5.26□□□□□ -1.57
SEC22YLR268W GIC2Q06648 383 aa5.26□□□□□ -1.57
SEC22YLR268W ERS1P17261 260 aa5.25□□□□□ -1.57
SEC22YLR268W RNQ1P25367 405 aa5.25□□□□□ -1.57
SEC22YLR268W CPS1P27614 576 aa5.25□□□□□ -1.57
SEC22YLR268W KTR2P33550 425 aa5.25□□□□□ -1.57
SEC22YLR268W NEO1P40527 1151 aa5.25□□□□□ -1.57
SEC22YLR268W YJR124CP47159 448 aa5.25□□□□□ -1.57
SEC22YLR268W ECL1P48235 211 aa5.25□□□□□ -1.57
SEC22YLR268W KIP3P53086 805 aaKnown RBP5.24□□□□□ -1.57
SEC22YLR268W YNR065CP53751 1116 aa5.24□□□□□ -1.57
SEC22YLR268W FAR11P53917 953 aa5.24□□□□□ -1.57
SEC22YLR268W HAS1Q03532 505 aaKnown RBP5.24□□□□□ -1.57
SEC22YLR268W LRG1P35688 1017 aa5.23□□□□□ -1.57
SEC22YLR268W SDH1Q00711 640 aa5.23□□□□□ -1.57
SEC22YLR268W GLO4Q12320 285 aa5.23□□□□□ -1.57
SEC22YLR268W GCD1P09032 578 aaPredicted RBP5.22□□□□□ -1.57
SEC22YLR268W SEG2P34250 1132 aa5.22□□□□□ -1.57
SEC22YLR268W RRN6P32786 894 aa5.21□□□□□ -1.58
SEC22YLR268W IRS4P36115 615 aaKnown RBP5.21□□□□□ -1.58
SEC22YLR268W POL12P38121 705 aaPredicted RBP5.21□□□□□ -1.58
SEC22YLR268W LEO1P38439 464 aa5.21□□□□□ -1.58
SEC22YLR268W RAD55P38953 406 aa5.21□□□□□ -1.58
SEC22YLR268W FET4P40988 552 aa5.21□□□□□ -1.58
SEC22YLR268W YOR223WQ12015 292 aa5.21□□□□□ -1.58
SEC22YLR268W TIF6Q12522 245 aaKnown RBP5.21□□□□□ -1.58
SEC22YLR268W DFG16Q99234 619 aa5.21□□□□□ -1.58
SEC22YLR268W SMC1P32908 1225 aa5.2□□□□□ -1.58
SEC22YLR268W MMM1P41800 426 aa5.2□□□□□ -1.58
SEC22YLR268W SUT1P53032 299 aaKnown RBP5.2□□□□□ -1.58
SEC22YLR268W PNP1Q05788 311 aa5.2□□□□□ -1.58
SEC22YLR268W PSY2P40164 858 aa5.19□□□□□ -1.58
SEC22YLR268W CIT3P43635 486 aa5.19□□□□□ -1.58
SEC22YLR268W NSI1Q12457 570 aa5.19□□□□□ -1.58
SEC22YLR268W LSO1Q3E827 93 aa5.19□□□□□ -1.58
SEC22YLR268W PYC2P32327 1180 aaKnown RBP5.18□□□□□ -1.58
SEC22YLR268W PRP43P53131 767 aaKnown RBP5.18□□□□□ -1.58
SEC22YLR268W YOR059CQ08448 450 aaKnown RBP5.18□□□□□ -1.58
SEC22YLR268W YLL054CQ12244 843 aa5.18□□□□□ -1.58
SEC22YLR268W RPB10P22139 70 aa5.17□□□□□ -1.58
SEC22YLR268W YCR015CP25616 317 aa5.17□□□□□ -1.58
SEC22YLR268W GCV1P48015 400 aa5.16□□□□□ -1.58
SEC22YLR268W WHI3P34761 661 aaKnown RBP5.15□□□□□ -1.59
SEC22YLR268W GPT2P36148 743 aa5.15□□□□□ -1.59
SEC22YLR268W YML083CQ04526 418 aa5.15□□□□□ -1.59
SEC22YLR268W YMR074CQ04773 145 aa5.15□□□□□ -1.59
SEC22YLR268W SSA4P22202 642 aaKnown RBP5.14□□□□□ -1.59
SEC22YLR268W YHL008CP38750 627 aa5.14□□□□□ -1.59
SEC22YLR268W RCM1P53972 490 aa5.14□□□□□ -1.59
SEC22YLR268W YIG1Q08956 461 aa5.14□□□□□ -1.59
SEC22YLR268W GAS1P22146 559 aaKnown RBP5.13□□□□□ -1.59
SEC22YLR268W HSP78P33416 811 aa5.13□□□□□ -1.59
SEC22YLR268W TSA1P34760 196 aaKnown RBP5.13□□□□□ -1.59
SEC22YLR268W YKL222CP35995 705 aa5.13□□□□□ -1.59
SEC22YLR268W ORC3P54790 616 aa5.13□□□□□ -1.59
SEC22YLR268W DOT1Q04089 582 aaKnown RBP5.13□□□□□ -1.59
SEC22YLR268W CDA2Q06703 312 aa5.13□□□□□ -1.59
SEC22YLR268W ESC8Q08119 714 aa5.13□□□□□ -1.59
SEC22YLR268W NOB1Q08444 459 aaKnown RBP5.13□□□□□ -1.59
SEC22YLR268W OYE3P41816 400 aaPredicted RBP5.12□□□□□ -1.59
SEC22YLR268W DMA2P53924 522 aa5.12□□□□□ -1.59
SEC22YLR268W CTR9P89105 1077 aa5.1□□□□□ -1.59
SEC22YLR268W FUR4P05316 633 aaKnown RBP5.09□□□□□ -1.59
SEC22YLR268W RIM11P38615 370 aa5.09□□□□□ -1.59
SEC22YLR268W HTS1P07263 546 aaKnown RBP5.08□□□□□ -1.6
SEC22YLR268W RPS4AP0CX35 261 aaKnown RBP5.08□□□□□ -1.6
SEC22YLR268W RPS4BP0CX36 261 aaKnown RBP5.08□□□□□ -1.6
SEC22YLR268W PRP5P21372 849 aaPredicted RBP5.08□□□□□ -1.6
SEC22YLR268W ADP1P25371 1049 aa5.08□□□□□ -1.6
SEC22YLR268W ALT1P52893 592 aa5.08□□□□□ -1.6
SEC22YLR268W NPR1P22211 790 aa5.07□□□□□ -1.6
SEC22YLR268W BOL3P39724 118 aa5.07□□□□□ -1.6
SEC22YLR268W MEC3Q02574 474 aa5.07□□□□□ -1.6
SEC22YLR268W CMR1Q12510 522 aaKnown RBP5.07□□□□□ -1.6
SEC22YLR268W COBP00163 385 aa5.06□□□□□ -1.6
SEC22YLR268W THI80P35202 319 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms